BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0125.p (300 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775229.1| drug/metabolite transporter (DMT) superfamil... 442 e-122 ref|YP_001099105.1| putative permease [Herminiimonas arsenicoxyd... 417 e-115 ref|YP_001352390.1| transporter of the DMT superfamily [Janthino... 417 e-114 ref|YP_004753190.1| putative permease [Collimonas fungivorans Te... 366 2e-99 ref|YP_001898430.1| hypothetical protein Rpic_0848 [Ralstonia pi... 323 2e-86 >ref|YP_003775229.1| drug/metabolite transporter (DMT) superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ63321.1| permease of the drug/metabolite transporter (DMT) superfamily protein [Herbaspirillum seropedicae SmR1] Length = 306 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 223/288 (77%), Positives = 257/288 (89%) Query: 2 NSESKGMWLGFIGVAIFSLTLPFTRVAVAELNPAFVAFGRAVVAAVCAIGMLWHLKAKLP 61 +ES+GMWLG IGVA+FSLTLPFTR+AVAEL+PAFVAFGRAVVA +C++ +L ++A P Sbjct: 19 RNESRGMWLGLIGVAVFSLTLPFTRIAVAELSPAFVAFGRAVVAGLCSLALLAWMRAPRP 78 Query: 62 TRLQVRGLLITSLGVVVGFPLFSSIAMHYVPASHGAVVVGLLPLATALFGALRFGERPST 121 Q+RGL+IT+LGVVVGFPLFSSIAM YVPA+HGAVVVGLLPLATALFGALRFGERPS Sbjct: 79 NAQQLRGLVITALGVVVGFPLFSSIAMRYVPAAHGAVVVGLLPLATALFGALRFGERPSA 138 Query: 122 GFWIAALIGSFIVIAFALRQGGGSFHTADFALFAAVVAAAMGYAEGGRLSQSMGGQQVIC 181 GFW++AL GS IVIAFALR GGGSFH ADFALFAAV+ AAMGYAEGGRL+QSMGGQ VI Sbjct: 139 GFWLSALAGSAIVIAFALRAGGGSFHAADFALFAAVITAAMGYAEGGRLAQSMGGQNVIA 198 Query: 182 WALVLSMPVLLPVTIWLGMHYGVAASPQAWMSFAYVSFFSMFIGFFFWYKGLALGGIARV 241 WALV+++PV+LPV++WLG G++AS AW++F YVS FSMFIGFFFWYKGLALGGIARV Sbjct: 199 WALVVALPVMLPVSLWLGWQDGLSASAPAWLAFGYVSLFSMFIGFFFWYKGLALGGIARV 258 Query: 242 GQVQLLQPFMTLVGAAVIVGETLDASHLLFATAVIAVVAIGRRMAIRR 289 GQVQLLQPFM+L+GAAVI GE LDAS++LFA AVI VVAIGRRMA+RR Sbjct: 259 GQVQLLQPFMSLLGAAVIAGEALDASNMLFALAVIVVVAIGRRMAVRR 306 >ref|YP_001099105.1| putative permease [Herminiimonas arsenicoxydans] emb|CAL60978.1| putative permease of the drug/metabolite transporter (DMT) [Herminiimonas arsenicoxydans] Length = 313 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 209/289 (72%), Positives = 245/289 (84%) Query: 1 MNSESKGMWLGFIGVAIFSLTLPFTRVAVAELNPAFVAFGRAVVAAVCAIGMLWHLKAKL 60 M SE+KGMWLG IG+AIFSLTLPFTR+AVAELNP +A GRAVVAA C++ +LW A Sbjct: 23 MTSETKGMWLGAIGIAIFSLTLPFTRMAVAELNPVLMALGRAVVAACCSVLLLWWTNAPR 82 Query: 61 PTRLQVRGLLITSLGVVVGFPLFSSIAMHYVPASHGAVVVGLLPLATALFGALRFGERPS 120 PTR QV+ LLI + GVVVGFP+FSSIAM ++ ASHGA+++G+LPLATALFGALRFGERPS Sbjct: 83 PTRSQVKSLLIIASGVVVGFPVFSSIAMSHISASHGAIILGILPLATALFGALRFGERPS 142 Query: 121 TGFWIAALIGSFIVIAFALRQGGGSFHTADFALFAAVVAAAMGYAEGGRLSQSMGGQQVI 180 GFWI ALIGS +V AFA+ +GGGSF D A+ AV+AAAMGYAEGGRLS+SMGGQQVI Sbjct: 143 LGFWITALIGSALVAAFAVDEGGGSFQWGDLAMLIAVIAAAMGYAEGGRLSESMGGQQVI 202 Query: 181 CWALVLSMPVLLPVTIWLGMHYGVAASPQAWMSFAYVSFFSMFIGFFFWYKGLALGGIAR 240 WALVLSMP++LPVTIWL +HYGV AS AW+ FAYVS FSMFIGFFFWYKGLALGGI+R Sbjct: 203 SWALVLSMPIVLPVTIWLALHYGVQASVSAWVGFAYVSLFSMFIGFFFWYKGLALGGISR 262 Query: 241 VGQVQLLQPFMTLVGAAVIVGETLDASHLLFATAVIAVVAIGRRMAIRR 289 VGQVQL+QPF+TL+GAAVI+GE L+ LFA A+I VVA+GR+M I+R Sbjct: 263 VGQVQLIQPFLTLLGAAVILGELLEWRTFLFALAIIVVVAMGRKMPIKR 311 >ref|YP_001352390.1| transporter of the DMT superfamily [Janthinobacterium sp. Marseille] gb|ABR91094.1| transporter of the DMT superfamily [Janthinobacterium sp. Marseille] Length = 297 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 217/289 (75%), Positives = 251/289 (86%) Query: 1 MNSESKGMWLGFIGVAIFSLTLPFTRVAVAELNPAFVAFGRAVVAAVCAIGMLWHLKAKL 60 M E+KGM LG IGVA+FSLTLPFTR+AVAEL+P FVA GRAVVAA C+ +LW A L Sbjct: 7 MTQETKGMLLGAIGVALFSLTLPFTRMAVAELDPVFVALGRAVVAAACSAVLLWWTGAVL 66 Query: 61 PTRLQVRGLLITSLGVVVGFPLFSSIAMHYVPASHGAVVVGLLPLATALFGALRFGERPS 120 P R Q++ L IT+LGVVVGFP+FSSIAMHYVPASHGA+++G+LPLATALFGALRFGERPS Sbjct: 67 PNRTQLKSLFITALGVVVGFPVFSSIAMHYVPASHGAIILGILPLATALFGALRFGERPS 126 Query: 121 TGFWIAALIGSFIVIAFALRQGGGSFHTADFALFAAVVAAAMGYAEGGRLSQSMGGQQVI 180 GFWIAA+IGS +V+ FAL+QGGG H AD ALF AV+AAAMGYAEGGRLSQ++GGQQVI Sbjct: 127 PGFWIAAVIGSALVVGFALQQGGGELHIADLALFIAVMAAAMGYAEGGRLSQTLGGQQVI 186 Query: 181 CWALVLSMPVLLPVTIWLGMHYGVAASPQAWMSFAYVSFFSMFIGFFFWYKGLALGGIAR 240 WALVLSMPV+LPVT+WLG +GV+ASP AW FAYVS FSMFIGFFFWYKGLALGGIAR Sbjct: 187 SWALVLSMPVVLPVTVWLGWRHGVSASPAAWAGFAYVSLFSMFIGFFFWYKGLALGGIAR 246 Query: 241 VGQVQLLQPFMTLVGAAVIVGETLDASHLLFATAVIAVVAIGRRMAIRR 289 VGQVQL+QPF+TL+GAAVI+GE L+ LFA A+IAVVAIGR+M+I+R Sbjct: 247 VGQVQLIQPFLTLLGAAVILGEVLEWRTFLFALAIIAVVAIGRKMSIKR 295 >ref|YP_004753190.1| putative permease [Collimonas fungivorans Ter331] gb|AEK62367.1| putative permease (drug/metabolite transporter); putative membrane protein [Collimonas fungivorans Ter331] Length = 316 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 220/289 (76%), Positives = 256/289 (88%) Query: 1 MNSESKGMWLGFIGVAIFSLTLPFTRVAVAELNPAFVAFGRAVVAAVCAIGMLWHLKAKL 60 M ESKGMWLG +GVA+FSLTLPFTR+AVAELNP FVA GRAVVAA+C++ +LW LKAKL Sbjct: 25 MTDESKGMWLGLVGVAVFSLTLPFTRMAVAELNPVFVALGRAVVAALCSMLLLWKLKAKL 84 Query: 61 PTRLQVRGLLITSLGVVVGFPLFSSIAMHYVPASHGAVVVGLLPLATALFGALRFGERPS 120 PT Q + L +T+LGVVVGFP+FSS+AM YVPA+HGA+V+G+LPLATALFGALRFGERPS Sbjct: 85 PTAAQWKPLALTALGVVVGFPVFSSVAMRYVPAAHGAIVLGVLPLATALFGALRFGERPS 144 Query: 121 TGFWIAALIGSFIVIAFALRQGGGSFHTADFALFAAVVAAAMGYAEGGRLSQSMGGQQVI 180 GFWIAA+IGS IV+ FAL QGGG AD AL AAV+AAAMGYAEGGRLSQ+MGGQQVI Sbjct: 145 AGFWIAAVIGSLIVVVFALSQGGGGLQAADLALLAAVLAAAMGYAEGGRLSQTMGGQQVI 204 Query: 181 CWALVLSMPVLLPVTIWLGMHYGVAASPQAWMSFAYVSFFSMFIGFFFWYKGLALGGIAR 240 WAL+LS+PVLLPVT+WLG HYGV+ASP+AW+ FAYVS FSMFIGF FWYKGLALGGIAR Sbjct: 205 AWALLLSLPVLLPVTVWLGWHYGVSASPRAWLGFAYVSVFSMFIGFLFWYKGLALGGIAR 264 Query: 241 VGQVQLLQPFMTLVGAAVIVGETLDASHLLFATAVIAVVAIGRRMAIRR 289 VGQVQLLQPF+TL+GAA+++GETL A ++LFA AV+ VVA GR+MA+RR Sbjct: 265 VGQVQLLQPFLTLLGAALLLGETLQAGNMLFALAVLVVVAFGRKMAVRR 313 >ref|YP_001898430.1| hypothetical protein Rpic_0848 [Ralstonia pickettii 12J] gb|ACD25998.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii 12J] Length = 312 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 178/299 (59%), Positives = 222/299 (74%), Gaps = 11/299 (3%) Query: 2 NSESKGMWLGFIGVAIFSLTLPFTRVAVAELNPAFVAFGRAVVAAVCAIGMLWHL----K 57 ++E +G+ LG IGVAIFS TLPFTR+AVAEL+ FVA RAV+A+V A+ ML Sbjct: 14 HAERRGLLLGLIGVAIFSQTLPFTRMAVAELDATFVALARAVLASVLALAMLAATGAFSA 73 Query: 58 AKLPTRLQVRGLLITSLGVVVGFPLFSSIAMHYVPASHGAVVVGLLPLATALFGALRFGE 117 AK P Q L +T++GVVVGFPLFSS+AM VPA+HGA++ GLLPLATA+F A E Sbjct: 74 AKRPRGHQWWQLAVTAMGVVVGFPLFSSLAMRDVPAAHGAIITGLLPLATAIFAAWFGRE 133 Query: 118 RPSTGFWIAALIGSFIVIAFALRQGGGSFHTADFALFAAVVAAAMGYAEGGRLSQSMGGQ 177 RPS GFW+ AL GS +V++FAL QG GS H AD+ LFAA+V A+GYA GG+L++ +GG Sbjct: 134 RPSAGFWLCALAGSVLVVSFALLQGAGSLHRADWLLFAAMVTGALGYATGGKLARELGGT 193 Query: 178 QVICWALVLSMPVLLPVT---IWL-GMHYGVA---ASPQAWMSFAYVSFFSMFIGFFFWY 230 Q I WAL++S+PVLLP+ +WL H A AS +AWM AYVS FSMFIGF FWY Sbjct: 194 QTIAWALIVSLPVLLPLVSALVWLPSTHQAEALAHASSRAWMGLAYVSAFSMFIGFLFWY 253 Query: 231 KGLALGGIARVGQVQLLQPFMTLVGAAVIVGETLDASHLLFATAVIAVVAIGRRMAIRR 289 GLA GG+ARVGQ+QLLQPFMTL+G +++GE+LDA +LFA AVIAVV IGRR ++RR Sbjct: 254 SGLAAGGVARVGQIQLLQPFMTLIGGWLLLGESLDAPTVLFALAVIAVVGIGRRTSVRR 312