BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0121.p (229 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_999617.1| hypothetical protein Veis_4911 [Verminephrobact... 268 4e-70 ref|YP_003775227.1| threonine dehydratase [Herbaspirillum serope... 236 2e-60 ref|YP_004236786.1| threonine ammonia-lyase [Acidovorax avenae s... 229 2e-58 ref|YP_972755.1| hypothetical protein Aave_4441 [Acidovorax citr... 225 5e-57 ref|XP_002945355.1| PREDICTED: threo-3-hydroxyaspartate ammonia-... 223 1e-56 >ref|YP_999617.1| hypothetical protein Veis_4911 [Verminephrobacter eiseniae EF01-2] gb|ABM60599.1| Threonine ammonia-lyase [Verminephrobacter eiseniae EF01-2] Length = 323 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 134/191 (70%), Positives = 149/191 (78%), Gaps = 7/191 (3%) Query: 4 LLPTHADIEQAAKAVYAAMPATPQYAWPLLSEALGAEAWVKHENHTPTGAFKIRGGLVYL 63 LLP HA+IEQAAK VYAAMPATPQY+WPLL+ ALG E WVKHENHTPTGAFK+RGGLVYL Sbjct: 5 LLPGHAEIEQAAKLVYAAMPATPQYSWPLLNAALGTETWVKHENHTPTGAFKVRGGLVYL 64 Query: 64 QNLAQRPRQQQVRGVISATRGNHGQSVGFAARRYGIPATIVVPQGNSREKNAAMRALGVE 123 Q +++ GVISATRGNHGQSVGFAARRYGI ATIVVP GNS+EKNAAMRALGV Sbjct: 65 Q-------ERRASGVISATRGNHGQSVGFAARRYGIAATIVVPHGNSKEKNAAMRALGVT 117 Query: 124 LVEFGQEFQESREHAAMLAQQEQLHMIPSFHRDLVSGVATYWIXRARGAACAQCAYAHHR 183 LVE G+EFQESREHA MLAQ++ LHMIPSFHRDLV GVAT W+ R + Sbjct: 118 LVEHGKEFQESREHAVMLAQRDALHMIPSFHRDLVCGVATCWMELLRAQPDLDVLFVPIG 177 Query: 184 RGVGACAGLQA 194 +G CA + A Sbjct: 178 QGSEICAAVAA 188 >ref|YP_003775227.1| threonine dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ63319.1| threonine dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 351 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 121/163 (74%), Positives = 137/163 (84%), Gaps = 2/163 (1%) Query: 4 LLPTHADIEQAAKAVYAAMPATPQYAWPLLSEALGAEAWVKHENHTPTGAFKIRGGLVYL 63 LLP+ DIEQAA VYA M T Q WPLL++ALGAE WVKHENH PTGAFK+RGG+VYL Sbjct: 8 LLPSLTDIEQAAGIVYAGMAPTAQLCWPLLNQALGAEVWVKHENHAPTGAFKVRGGMVYL 67 Query: 64 QNLAQRPRQQQVRGVISATRGNHGQSVGFAARRYGIPATIVVPQGNSREKNAAMRALGVE 123 +LA++ Q Q+ GV+SATRGNHGQSVG AARR GI ATIVVPQGNSREKNAAMRALGVE Sbjct: 68 HHLARQ--QPQLSGVVSATRGNHGQSVGLAARRLGISATIVVPQGNSREKNAAMRALGVE 125 Query: 124 LVEFGQEFQESREHAAMLAQQEQLHMIPSFHRDLVSGVATYWI 166 L+E G EFQESRE+A LA Q+QLHMIPS HRDLV+GVA+YW+ Sbjct: 126 LIEHGSEFQESREYAQQLAAQQQLHMIPSLHRDLVAGVASYWM 168 >ref|YP_004236786.1| threonine ammonia-lyase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX48219.1| Threonine ammonia-lyase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 339 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 120/193 (62%), Positives = 135/193 (69%), Gaps = 8/193 (4%) Query: 5 LPTHADIEQAAKAVYAAMPATPQYAWPLLSEALGAEAWVKHENHTPTGAFKIRGGLVYLQ 64 LP ADIE AAK VYA TPQY W LL E LGAE W+KHENHTP GAFKIRGGL Y Sbjct: 20 LPGLADIEAAAKVVYADFAPTPQYRWALLGERLGAECWIKHENHTPVGAFKIRGGLTYFD 79 Query: 65 NLAQR---PRQQQVRGVISATRGNHGQSVGFAARRYGIPATIVVPQGNSREKNAAMRALG 121 LA+R PR+ VISATRGNHGQS+G+AARR+G+ TIVVP GNS EKNAAMRALG Sbjct: 80 QLARRGAMPRE-----VISATRGNHGQSLGWAARRHGVACTIVVPHGNSVEKNAAMRALG 134 Query: 122 VELVEFGQEFQESREHAAMLAQQEQLHMIPSFHRDLVSGVATYWIXRARGAACAQCAYAH 181 V L+E GQ+FQE+REHA LA + HM+PSFH DL+ GVATYW R AY Sbjct: 135 VSLIEHGQDFQEAREHAMQLAAERGAHMVPSFHADLLRGVATYWWEFLRAVPHMDVAYVP 194 Query: 182 HRRGVGACAGLQA 194 +G GAC+ L A Sbjct: 195 IGQGSGACSALAA 207 >ref|YP_972755.1| hypothetical protein Aave_4441 [Acidovorax citrulli AAC00-1] gb|ABM34981.1| Threonine ammonia-lyase [Acidovorax citrulli AAC00-1] Length = 339 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 117/190 (61%), Positives = 133/190 (70%), Gaps = 2/190 (1%) Query: 5 LPTHADIEQAAKAVYAAMPATPQYAWPLLSEALGAEAWVKHENHTPTGAFKIRGGLVYLQ 64 LP+ ADIE AA+ VYA TPQY W LL E LGAE W+KHENHTP GAFKIRGGL Y Sbjct: 20 LPSLADIEAAAEVVYADFAPTPQYRWALLGERLGAECWIKHENHTPVGAFKIRGGLTYFD 79 Query: 65 NLAQRPRQQQVRGVISATRGNHGQSVGFAARRYGIPATIVVPQGNSREKNAAMRALGVEL 124 LA+R R VISATRGNHGQS+G+AARR+G+ TIVVP G+S EKNAAMRALGV L Sbjct: 80 QLARR--GDMPREVISATRGNHGQSLGWAARRHGVACTIVVPHGSSVEKNAAMRALGVSL 137 Query: 125 VEFGQEFQESREHAAMLAQQEQLHMIPSFHRDLVSGVATYWIXRARGAACAQCAYAHHRR 184 +E GQ+FQE+REHA LA HM+PSFH DL+ GVATYW R AY + Sbjct: 138 IEQGQDFQEAREHAMQLAAGRGAHMVPSFHADLLRGVATYWWEFLRAVPRMDVAYVPIGQ 197 Query: 185 GVGACAGLQA 194 G GAC+ L A Sbjct: 198 GSGACSALAA 207 >ref|XP_002945355.1| PREDICTED: threo-3-hydroxyaspartate ammonia-lyase-like [Xenopus (Silurana) tropicalis] Length = 325 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 116/187 (62%), Positives = 132/187 (70%), Gaps = 8/187 (4%) Query: 4 LLPTHADIEQAAKAVYAAMPATPQYAWPLLSEALGAEAWVKHENHTPTGAFKIRGGLVYL 63 LPT ADIE AA+ +Y PATPQY W LL E LGAE W+KHENHTP GAFKIRGGL Y Sbjct: 7 FLPTLADIEAAAQIIYQDFPATPQYRWVLLGERLGAECWLKHENHTPVGAFKIRGGLTYF 66 Query: 64 QNLAQR---PRQQQVRGVISATRGNHGQSVGFAARRYGIPATIVVPQGNSREKNAAMRAL 120 LAQR P++ VISATRGNHGQS+G+AARR+G+ TIVVP GNS+EKNAAMRAL Sbjct: 67 DQLAQRGALPKE-----VISATRGNHGQSMGWAARRHGVACTIVVPHGNSQEKNAAMRAL 121 Query: 121 GVELVEFGQEFQESREHAAMLAQQEQLHMIPSFHRDLVSGVATYWIXRARGAACAQCAYA 180 GV LVE G +FQE+REHA LA + HM+PSFH DL+ GVATYW R AY Sbjct: 122 GVTLVEHGGDFQEAREHAMRLAAERGAHMVPSFHTDLLRGVATYWWEFLRAVPHMAVAYV 181 Query: 181 HHRRGVG 187 +G G Sbjct: 182 PIGQGSG 188