BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0116.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001354307.1| ABC-type nitrate/sulfonate/bicarbonate trans... 340 1e-91 ref|YP_003774077.1| nitrate/sulfonate/bicarbonate ABC transporte... 319 3e-85 ref|ZP_06730979.1| ABC transporter permease [Xanthomonas fuscans... 317 1e-84 ref|NP_641200.1| ABC transporter permease [Xanthomonas axonopodi... 317 1e-84 ref|ZP_08184181.1| ABC-type nitrate/sulfonate/bicarbonate transp... 317 2e-84 >ref|YP_001354307.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] gb|ABR89846.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] Length = 296 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 171/275 (62%), Positives = 216/275 (78%), Gaps = 1/275 (0%) Query: 14 QADFAHQGDDRIEDVAQQRNARRKSFNWPWGALLPVAFLGALEIGSAFDLIPSRLLPPPS 73 A + + A + A+ + W G +LP+A LG +E+ + I +RLLPPPS Sbjct: 21 HATVNKKAVKDVATTAAEPVAKARKLGW-LGWILPLAVLGFVEVAAQLGWIQARLLPPPS 79 Query: 74 EIAQTIYALAKRDLFAHIAVSVARVAAGFSIGALLAVAFGVLVGMHRRAESLLEPSFQAL 133 EI QT+ AL ++ L HI+ SVARV +G++IGA+LA+ FG+ VG+ + AE+ EP+FQAL Sbjct: 80 EIVQTLSALLEQGLLVHISASVARVFSGYAIGAVLAILFGLFVGLSKHAEAFFEPTFQAL 139 Query: 134 RAIPSLAWIPLLLLWLGIDETPKIVLIAIGAFFPVYINLVAGIHNVDRKLLEVGKIHGLS 193 RAIPSLAW+PLLLLW GIDETPKI LIAIGAFFP+Y+ LV+GI NVDRKL+E+G+I+GLS Sbjct: 140 RAIPSLAWVPLLLLWFGIDETPKITLIAIGAFFPIYLGLVSGIRNVDRKLIELGEIYGLS 199 Query: 194 SRDLIRRILLPAALPNLFTGLRTGLSLSWMFLVAAELIAATKGVGYLLSDGRESSRPDIV 253 + L RRI+LPAALP+LFTGLR GLSL+WMFLVAAELIAATKG+GYLL+DGRE+SRPD+V Sbjct: 200 APALARRIVLPAALPSLFTGLRNGLSLAWMFLVAAELIAATKGIGYLLTDGRETSRPDVV 259 Query: 254 LAAIIILATLGKLSDSLLKHIETRKLRWRDVLASR 288 LAAI +LA LGKL+D LLK +ETRKL W D LA+R Sbjct: 260 LAAIFLLAILGKLTDGLLKWLETRKLAWSDSLATR 294 >ref|YP_003774077.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ62169.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 278 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 175/241 (72%), Positives = 209/241 (86%), Gaps = 1/241 (0%) Query: 44 GALLPVAFLGALEIGSAFDLIPSRLLPPPSEIAQTIYALAKR-DLFAHIAVSVARVAAGF 102 G ++P+AFL +E G+ +LIP+RLLPPPSE+A T+++LA+R +L HIA S+ARVAAGF Sbjct: 28 GWIVPLAFLLLVEAGARLELIPARLLPPPSELAHTLWSLAQRGELLPHIAASLARVAAGF 87 Query: 103 SIGALLAVAFGVLVGMHRRAESLLEPSFQALRAIPSLAWIPLLLLWLGIDETPKIVLIAI 162 IG+ LAVA G+LVG+ RRAE+LLEPSFQALRAIPSLAWIPLLLLWLGIDETPK+VLIAI Sbjct: 88 VIGSALAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLLLWLGIDETPKVVLIAI 147 Query: 163 GAFFPVYINLVAGIHNVDRKLLEVGKIHGLSSRDLIRRILLPAALPNLFTGLRTGLSLSW 222 GAFFPVY+NLVAGI ++D KL+EVG GL+++ LI ILLPA+LP LF GLR GLSL+W Sbjct: 148 GAFFPVYLNLVAGIRDIDHKLIEVGTTSGLNTQALIGHILLPASLPYLFAGLRGGLSLAW 207 Query: 223 MFLVAAELIAATKGVGYLLSDGRESSRPDIVLAAIIILATLGKLSDSLLKHIETRKLRWR 282 MFLVAAELIAATKGVGYLLSDGRESSRPD+VLAAI+ILA LGKLSD LL+ +E + L WR Sbjct: 208 MFLVAAELIAATKGVGYLLSDGRESSRPDLVLAAILILALLGKLSDGLLRAVEQKSLGWR 267 Query: 283 D 283 + Sbjct: 268 E 268 >ref|ZP_06730979.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gb|EFF47922.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 283 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 163/245 (66%), Positives = 196/245 (80%) Query: 44 GALLPVAFLGALEIGSAFDLIPSRLLPPPSEIAQTIYALAKRDLFAHIAVSVARVAAGFS 103 G LLP+ F LE+ SA PS LLPPPS+I +T+ A R L +H+ SV RV AGFS Sbjct: 29 GWLLPLIFFAGLELASALGWTPSYLLPPPSQILRTLADEANRGLASHVGASVLRVLAGFS 88 Query: 104 IGALLAVAFGVLVGMHRRAESLLEPSFQALRAIPSLAWIPLLLLWLGIDETPKIVLIAIG 163 IGA L + GV VG+ R E LL+PSFQALRA+PSLAW+PLLLLW+GIDE PKI LIAIG Sbjct: 89 IGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGIDEAPKITLIAIG 148 Query: 164 AFFPVYINLVAGIHNVDRKLLEVGKIHGLSSRDLIRRILLPAALPNLFTGLRTGLSLSWM 223 AFFPVY+ +V+G+ VDR L+E+G+ +GLS L+RRILLPAALP++FTGLRT LSL+WM Sbjct: 149 AFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSLAWM 208 Query: 224 FLVAAELIAATKGVGYLLSDGRESSRPDIVLAAIIILATLGKLSDSLLKHIETRKLRWRD 283 FLVAAELIAAT+G+GYLLSDGRE+SRPDIV+ AI++LA LGKLSD LLK IE+R LRWRD Sbjct: 209 FLVAAELIAATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGLLKSIESRTLRWRD 268 Query: 284 VLASR 288 L +R Sbjct: 269 NLQNR 273 >ref|NP_641200.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] gb|AAM35736.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] Length = 283 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 163/245 (66%), Positives = 196/245 (80%) Query: 44 GALLPVAFLGALEIGSAFDLIPSRLLPPPSEIAQTIYALAKRDLFAHIAVSVARVAAGFS 103 G LLP+ F LE+ SA PS LLPPPS+I +T+ A R L +H+ SV RV AGFS Sbjct: 29 GWLLPLVFFAGLELASALGWTPSYLLPPPSQILRTLADEASRGLASHVGASVLRVLAGFS 88 Query: 104 IGALLAVAFGVLVGMHRRAESLLEPSFQALRAIPSLAWIPLLLLWLGIDETPKIVLIAIG 163 IGA L + GV VG+ R E LL+PSFQALRA+PSLAW+PLLLLW+GIDE PKI LIAIG Sbjct: 89 IGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGIDEAPKITLIAIG 148 Query: 164 AFFPVYINLVAGIHNVDRKLLEVGKIHGLSSRDLIRRILLPAALPNLFTGLRTGLSLSWM 223 AFFPVY+ +V+G+ VDR L+E+G+ +GLS L+RRILLPAALP++FTGLRT LSL+WM Sbjct: 149 AFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSLAWM 208 Query: 224 FLVAAELIAATKGVGYLLSDGRESSRPDIVLAAIIILATLGKLSDSLLKHIETRKLRWRD 283 FLVAAELIAAT+G+GYLLSDGRE+SRPDIV+ AI++LA LGKLSD LLK IE+R LRWRD Sbjct: 209 FLVAAELIAATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGLLKSIESRTLRWRD 268 Query: 284 VLASR 288 L +R Sbjct: 269 NLQNR 273 >ref|ZP_08184181.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Xanthomonas gardneri ATCC 19865] gb|EGD18194.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Xanthomonas gardneri ATCC 19865] Length = 284 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 163/245 (66%), Positives = 197/245 (80%) Query: 44 GALLPVAFLGALEIGSAFDLIPSRLLPPPSEIAQTIYALAKRDLFAHIAVSVARVAAGFS 103 G LLP++F GALEI SA P LLPPPS+I T+ A R L +HI SV RV AGF+ Sbjct: 30 GWLLPLSFFGALEIASALGWTPRYLLPPPSQILTTLADEAGRGLASHIGASVLRVLAGFA 89 Query: 104 IGALLAVAFGVLVGMHRRAESLLEPSFQALRAIPSLAWIPLLLLWLGIDETPKIVLIAIG 163 IGA L + GV VG+ R E L++PSFQALRA+PSLAW+PLLLLW+GIDE PKI LIAIG Sbjct: 90 IGAGLGLLIGVGVGLSRWLEQLIDPSFQALRAVPSLAWVPLLLLWMGIDEAPKITLIAIG 149 Query: 164 AFFPVYINLVAGIHNVDRKLLEVGKIHGLSSRDLIRRILLPAALPNLFTGLRTGLSLSWM 223 AFFPVY+ +V+G+ VDR L+E+G+ +GLS L+RRILLPAALP++FTGLRT LSL+WM Sbjct: 150 AFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSLAWM 209 Query: 224 FLVAAELIAATKGVGYLLSDGRESSRPDIVLAAIIILATLGKLSDSLLKHIETRKLRWRD 283 FLVAAELIAAT+G+GYLLSDGRE+SRPDIV+ AI++LA LGKLSD +LK IE+R LRWRD Sbjct: 210 FLVAAELIAATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGVLKAIESRTLRWRD 269 Query: 284 VLASR 288 L +R Sbjct: 270 NLQNR 274