BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0115.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774078.1| nitrate/sulfonate/bicarbonate ABC transporte... 517 e-144 ref|ZP_08504077.1| ABC-type nitrate/sulfonate/bicarbonate transp... 483 e-134 ref|YP_001354306.1| ABC-type nitrate/sulfonate/bicarbonate trans... 457 e-126 ref|ZP_08184182.1| ABC transporter, substrate-binding protein, a... 430 e-118 ref|YP_980785.1| aliphatic sulfonate ABC transporter periplasmic... 416 e-114 >ref|YP_003774078.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62170.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 261/327 (79%), Positives = 292/327 (89%), Gaps = 1/327 (0%) Query: 1 MQRRHFLQLSTATVGAAALG-LPLTGRAADAPKTIRLDYATYSPPSLVLKKFGWLEEDLK 59 M RR FL+L+ A +G ALG +PL AA PK IRLDYA YSPPSLVL+KFGWLEEDLK Sbjct: 1 MHRRDFLRLAPAALGVTALGGIPLLSSAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLK 60 Query: 60 SSGGSVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPAKAVYVFSRPEWTAL 119 + G VKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNP KAVY++SRPEWTAL Sbjct: 61 AQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL 120 Query: 120 AVQKDSTIRSVKELKGKKIAATKGTDPYLFLLRALHENGLAKSDVEILHLQHPDGRVALE 179 AV K+S ++S+ ELKGKKIAATKGTDPYLFLLRALHENGL KSDVEI+HLQH DGR ALE Sbjct: 121 AVGKESPVKSINELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE 180 Query: 180 QKRVDAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAAKYPDEVKRVIRAYE 239 Q RV AWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAA++PD+VKRVI AYE Sbjct: 181 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYE 240 Query: 240 RARLWIIKNPDETAKLIAEEARLSLPVAQLQLKRNDFSNPQIGKEHIDALRAAAPILLDE 299 RAR WII +PDET L++EE++LS PVA+LQLKRNDFS PQIG+EHI+ALRAAAPILL+E Sbjct: 241 RARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAAPILLEE 300 Query: 300 ELVRSGTDLSRTITALIDPAYSQGLIR 326 +LV+SGTDL RTI ALIDP+Y+QG++R Sbjct: 301 DLVKSGTDLPRTINALIDPSYAQGVVR 327 >ref|ZP_08504077.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Methyloversatilis universalis FAM5] gb|EGK72625.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Methyloversatilis universalis FAM5] Length = 331 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 227/299 (75%), Positives = 268/299 (89%) Query: 27 AADAPKTIRLDYATYSPPSLVLKKFGWLEEDLKSSGGSVKWVLSQGSNRALEYLNSDSVD 86 A DAPK IRLDYA YSP SLVLK+FGWLE+ +K +G VKW LSQGSNRALE+LNS ++D Sbjct: 29 AGDAPKEIRLDYAYYSPTSLVLKRFGWLEQAVKPAGIEVKWTLSQGSNRALEFLNSGAID 88 Query: 87 FGSTAGLAALLARANGNPAKAVYVFSRPEWTALAVQKDSTIRSVKELKGKKIAATKGTDP 146 FGSTAGLAA+L+RANGNP ++VYV+SRPEWTALAV KDSTI+SV ELKGK+IAATKGTDP Sbjct: 89 FGSTAGLAAVLSRANGNPIRSVYVYSRPEWTALAVPKDSTIKSVAELKGKRIAATKGTDP 148 Query: 147 YLFLLRALHENGLAKSDVEILHLQHPDGRVALEQKRVDAWAGLDPHLAASELEAGSRLIY 206 YLFLLR+LHE GL+++DVEI+HLQHPDGRVALEQKRVDAWAGLDPHLAASELEAGS+LIY Sbjct: 149 YLFLLRSLHEAGLSRNDVEIVHLQHPDGRVALEQKRVDAWAGLDPHLAASELEAGSKLIY 208 Query: 207 RNVNFNTYGFLNVSDSFAAKYPDEVKRVIRAYERARLWIIKNPDETAKLIAEEARLSLPV 266 RNVNFNTYGFLNVS+ F +PD+VK VI AYERAR W+I NPDE AK++AEEA+L+LPV Sbjct: 209 RNVNFNTYGFLNVSEKFLKAHPDQVKTVIAAYERARRWVIANPDEAAKILAEEAKLNLPV 268 Query: 267 AQLQLKRNDFSNPQIGKEHIDALRAAAPILLDEELVRSGTDLSRTITALIDPAYSQGLI 325 AQ QLKR DFSNP+IG+EH DALRAAAPIL++EELVR GTD+++ +T LIDP+++ ++ Sbjct: 269 AQAQLKRTDFSNPRIGREHHDALRAAAPILVEEELVRKGTDVAKVVTELIDPSHAAAVL 327 >ref|YP_001354306.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component [Janthinobacterium sp. Marseille] gb|ABR90065.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component [Janthinobacterium sp. Marseille] Length = 332 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 222/326 (68%), Positives = 272/326 (83%), Gaps = 3/326 (0%) Query: 1 MQRRHFLQLSTATVGAAALG--LPLTGRAADAPKTIRLDYATYSPPSLVLKKFGWLEEDL 58 M RR F++ +TA + A L + L+ AA AP+ IRLDYA YSP SLVLK FGWLEE + Sbjct: 1 MDRRFFIK-NTALLTLAGLSTSVSLSAHAAAAPEEIRLDYAYYSPTSLVLKHFGWLEEQV 59 Query: 59 KSSGGSVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPAKAVYVFSRPEWTA 118 KSSG VKW LSQGSNRALEYL+++S+DFGSTAGLAA+L+RANGNP K+VYV+SRPEWTA Sbjct: 60 KSSGIKVKWTLSQGSNRALEYLSANSIDFGSTAGLAAVLSRANGNPIKSVYVYSRPEWTA 119 Query: 119 LAVQKDSTIRSVKELKGKKIAATKGTDPYLFLLRALHENGLAKSDVEILHLQHPDGRVAL 178 L V KDS I++V +LKGKKIAATKGTDPYLFLLR L NGL KSDVEI+HLQH DGR AL Sbjct: 120 LLVPKDSPIKTVADLKGKKIAATKGTDPYLFLLRTLKVNGLKKSDVEIVHLQHADGRAAL 179 Query: 179 EQKRVDAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAAKYPDEVKRVIRAY 238 E R+DAWAGLDPH+A+SEL+AGSRL+YRNV FNTYGFLNV++ FA KYP++VK+V++AY Sbjct: 180 ESGRIDAWAGLDPHMASSELQAGSRLLYRNVAFNTYGFLNVTEDFAKKYPEQVKQVLQAY 239 Query: 239 ERARLWIIKNPDETAKLIAEEARLSLPVAQLQLKRNDFSNPQIGKEHIDALRAAAPILLD 298 ERARLWI+ NP E +++ A+EA++SL VA++QL R DFSNP IG+EH +AL+AAAPILL Sbjct: 240 ERARLWILANPREASQIQADEAKISLAVAKVQLNRTDFSNPYIGREHREALQAAAPILLQ 299 Query: 299 EELVRSGTDLSRTITALIDPAYSQGL 324 E+LV+ GTDL++ I LIDP++ Q L Sbjct: 300 EDLVKKGTDLNKVINDLIDPSFVQSL 325 >ref|ZP_08184182.1| ABC transporter, substrate-binding protein, aliphatic sulfonates family [Xanthomonas gardneri ATCC 19865] gb|EGD18195.1| ABC transporter, substrate-binding protein, aliphatic sulfonates family [Xanthomonas gardneri ATCC 19865] Length = 334 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 218/328 (66%), Positives = 259/328 (78%), Gaps = 9/328 (2%) Query: 1 MQRRHFLQLSTATVGAAALGL-PLTGRAADA------PKTIRLDYATYSPPSLVLKKFGW 53 M+RR+ L+ T+ ALG PL RA A PK +RLDYA YSP SLVLK FGW Sbjct: 1 MKRRNLLKF--GTLAGVALGTSPLLSRATLAQANGAVPKQLRLDYAYYSPTSLVLKHFGW 58 Query: 54 LEEDLKSSGGSVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPAKAVYVFSR 113 LE+ LK+ G VKWVLS GSNRALEYL +S+DFGSTAGLA+LLARANGNP KAVY++SR Sbjct: 59 LEQALKAQGTQVKWVLSAGSNRALEYLGGNSIDFGSTAGLASLLARANGNPIKAVYIYSR 118 Query: 114 PEWTALAVQKDSTIRSVKELKGKKIAATKGTDPYLFLLRALHENGLAKSDVEILHLQHPD 173 PEW ALAV K+S IR + ELKGK+IAATKGTD YLFLLRAL + GL+K+ VEI+HLQHPD Sbjct: 119 PEWIALAVGKNSPIRQLTELKGKRIAATKGTDAYLFLLRALRQAGLSKNAVEIVHLQHPD 178 Query: 174 GRVALEQKRVDAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAAKYPDEVKR 233 GR ALE+ VDAW+GLDPHLAAS++EAG+RLIYRNV FN+ GFLNVS++FAA YPD++ Sbjct: 179 GRTALERGDVDAWSGLDPHLAASQIEAGTRLIYRNVAFNSRGFLNVSETFAAAYPDQIPL 238 Query: 234 VIRAYERARLWIIKNPDETAKLIAEEARLSLPVAQLQLKRNDFSNPQIGKEHIDALRAAA 293 VI+AYE+AR W I +PDE A LIA EARLSL VA LQL+R D NP IG E AL++AA Sbjct: 239 VIQAYEKARKWAIAHPDELAALIATEARLSLQVATLQLQRTDLRNPVIGPEERAALQSAA 298 Query: 294 PILLDEELVRSGTDLSRTITALIDPAYS 321 PILL+E LVR GTDL++ + ALIDP+Y+ Sbjct: 299 PILLEEGLVRPGTDLTKVLAALIDPSYA 326 >ref|YP_980785.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Polaromonas naphthalenivorans CJ2] gb|ABM35864.1| aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [Polaromonas naphthalenivorans CJ2] Length = 334 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 218/329 (66%), Positives = 259/329 (78%), Gaps = 3/329 (0%) Query: 1 MQRRHFLQLSTATVGAAALGLPLTGRAADAPKTIRLDYATYSPPSLVLKKFGWLEEDLKS 60 + RR L L+ GA P T RAAD P+ +R+DYATYSP SLVLK+FGWLEEDLK Sbjct: 8 LNRRTLLSLTGGLAGAVIA--PATLRAADLPQEVRIDYATYSPTSLVLKRFGWLEEDLKR 65 Query: 61 SGGSVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPAKAVYVFSRPEWTALA 120 G +VKWV S GSNRALEYLN+ S+D GS AGLAALLARANGNP +A Y+FSRPEWTAL Sbjct: 66 DGVAVKWVFSAGSNRALEYLNAKSLDIGSAAGLAALLARANGNPIRAPYIFSRPEWTALL 125 Query: 121 VQKDSTIRSVKELKGKKIAATKGTDPYLFLLRALHENGLAKSDVEILHLQHPDGRVALEQ 180 V KDS IR++ +LKGKK+AATKGTDPYLFLLRAL L +SD+E + LQH DGR ALEQ Sbjct: 126 VPKDSPIRTLADLKGKKVAATKGTDPYLFLLRALQTVKLKRSDIEHVSLQHADGRAALEQ 185 Query: 181 KRVDAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAAKYPDEVKRVIRAYER 240 RVDAWAGLDPH+AASEL AGSRL+YRNV FNTYGFLNV + F ++P+ ++RVI AYER Sbjct: 186 GRVDAWAGLDPHMAASELTAGSRLLYRNVAFNTYGFLNVREDFQQRHPELLRRVIGAYER 245 Query: 241 ARLWIIKNPDETAKLIAEEARLSLPVAQLQLK-RNDFSNPQIGKEHIDALRAAAPILLDE 299 ARLW + N E A+++A+EA++SL VA LQLK R D SNPQ EH+ AL+AA PILLDE Sbjct: 246 ARLWTLANTGEAARILADEAKVSLQVALLQLKLRTDLSNPQPSAEHVKALQAATPILLDE 305 Query: 300 ELVRSGTDLSRTITALIDPAYSQGLIRQA 328 +LV+ GTDL RT+ AL+D ++QGLIRQA Sbjct: 306 QLVKPGTDLLRTVEALVDTRFAQGLIRQA 334