BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0112.p (366 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001354551.1| recombinase A [Janthinobacterium sp. Marseil... 643 0.0 ref|YP_001100871.1| recombinase A [Herminiimonas arsenicoxydans]... 641 0.0 ref|YP_004754451.1| RecA protein [Collimonas fungivorans Ter331]... 634 e-180 ref|ZP_08274403.1| RecA protein [Oxalobacteraceae bacterium IMCC... 631 e-179 ref|YP_003774082.1| recombinase A protein [Herbaspirillum serope... 621 e-176 >ref|YP_001354551.1| recombinase A [Janthinobacterium sp. Marseille] sp|A6T204.1|RECA_JANMA RecName: Full=Protein RecA; AltName: Full=Recombinase A gb|ABR88805.1| RecA recombination protein [Janthinobacterium sp. Marseille] Length = 367 Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/366 (89%), Positives = 344/366 (93%), Gaps = 9/366 (2%) Query: 1 MDDKKSANNTEKGKALAAALAQIEKQFGKGSVMRMEDGAVLEEIQVVSTGSLGLDIALGV 60 MDDKK+A +++K KALAAALAQIEKQFGKGSVMRMEDGAV+EE+QVVSTGSLGLDIALGV Sbjct: 1 MDDKKNAPSSDKSKALAAALAQIEKQFGKGSVMRMEDGAVVEEVQVVSTGSLGLDIALGV 60 Query: 61 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKIGGTCAFIDAEHALDVTYAQKLGVNLSD 120 GGLPRGRV+EIYGPESSGKTTLTLQ IAEMQK+GGTCAFIDAEHALDVTYAQKLG+NLSD Sbjct: 61 GGLPRGRVVEIYGPESSGKTTLTLQTIAEMQKLGGTCAFIDAEHALDVTYAQKLGINLSD 120 Query: 121 LLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 LLISQPDTGEQALEI DALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEICDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 Query: 181 ALRKLTGSINRTSTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 ALRKLTGSINRT+T VIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 241 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 GDEVIG+ETKVKVVKNK+APPF+EAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY Sbjct: 241 GDEVIGNETKVKVVKNKIAPPFKEAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 Query: 301 NGERIGQGKDNARNFLKERPELAREIENKVRASLGVPELAASGAGAAATPAPTGKGSAKN 360 NGERIGQGKDNARN+LKERP+LAREIENKVR SLGVPEL GA + P AK Sbjct: 301 NGERIGQGKDNARNYLKERPDLAREIENKVRVSLGVPEL-----GAIKSDEPV----AKK 351 Query: 361 VAAEES 366 +A+ES Sbjct: 352 ASAKES 357 >ref|YP_001100871.1| recombinase A [Herminiimonas arsenicoxydans] sp|A4G8B3.1|RECA_HERAR RecName: Full=Protein RecA; AltName: Full=Recombinase A emb|CAL62750.1| Protein RecA (Recombinase A) [Herminiimonas arsenicoxydans] Length = 367 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/366 (88%), Positives = 345/366 (94%), Gaps = 9/366 (2%) Query: 1 MDDKKSANNTEKGKALAAALAQIEKQFGKGSVMRMEDGAVLEEIQVVSTGSLGLDIALGV 60 MDDKK+A +++K KALAAALAQIEKQFGKGSVMRMEDGAV+EE+QVVSTGSLGLD+ALGV Sbjct: 1 MDDKKNAPSSDKSKALAAALAQIEKQFGKGSVMRMEDGAVVEEVQVVSTGSLGLDLALGV 60 Query: 61 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKIGGTCAFIDAEHALDVTYAQKLGVNLSD 120 GGLPRGRV+EIYGPESSGKTTLTLQ IAEMQK+GGTCAFIDAEHALDVTYAQKLG+NLS+ Sbjct: 61 GGLPRGRVVEIYGPESSGKTTLTLQTIAEMQKLGGTCAFIDAEHALDVTYAQKLGINLSE 120 Query: 121 LLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 LLISQPDTGEQALEI DALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEICDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 Query: 181 ALRKLTGSINRTSTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 ALRKLTGSINRT+T VIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 241 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 GDEVIG+ETKVKVVKNK+APPF+EAHF+ILYGEGTSREGEILDLGSDAKIVEKSGAWYSY Sbjct: 241 GDEVIGNETKVKVVKNKIAPPFKEAHFEILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 Query: 301 NGERIGQGKDNARNFLKERPELAREIENKVRASLGVPELAASGAGAAATPAPTGKGSAKN 360 NGERIGQGKDNARN+LKERPELAREIENKVRASLGVPEL GA + P AK Sbjct: 301 NGERIGQGKDNARNYLKERPELAREIENKVRASLGVPEL-----GAIKSDEPV----AKK 351 Query: 361 VAAEES 366 +A+ES Sbjct: 352 ASAKES 357 >ref|YP_004754451.1| RecA protein [Collimonas fungivorans Ter331] gb|AEK63628.1| RecA protein [Collimonas fungivorans Ter331] Length = 369 Score = 634 bits (1635), Expect = e-180, Method: Compositional matrix adjust. Identities = 318/339 (93%), Positives = 331/339 (97%) Query: 1 MDDKKSANNTEKGKALAAALAQIEKQFGKGSVMRMEDGAVLEEIQVVSTGSLGLDIALGV 60 MDDKKSA N +K KALAAALAQIEKQFGKGSVMRMEDGAV+EE+QVVSTGSLGLDIALGV Sbjct: 1 MDDKKSAPNPDKSKALAAALAQIEKQFGKGSVMRMEDGAVVEEVQVVSTGSLGLDIALGV 60 Query: 61 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKIGGTCAFIDAEHALDVTYAQKLGVNLSD 120 GGLPRGRV+EIYGPESSGKTTLTLQ IAEMQK+GGTCAFIDAEHALDV YAQKLG+NLS+ Sbjct: 61 GGLPRGRVVEIYGPESSGKTTLTLQTIAEMQKLGGTCAFIDAEHALDVGYAQKLGINLSE 120 Query: 121 LLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 LLISQPDTGEQALEITDALVRSGGVDLIV+DSVAALTPRAEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEITDALVRSGGVDLIVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 Query: 181 ALRKLTGSINRTSTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 ALRKLTGSINRT+T VIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 241 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 GDEVIG+ETKVKVVKNK+APPF+EAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY Sbjct: 241 GDEVIGNETKVKVVKNKIAPPFKEAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 Query: 301 NGERIGQGKDNARNFLKERPELAREIENKVRASLGVPEL 339 NGERIGQGKDNAR +LKERPELAREIENKVRASLGVP L Sbjct: 301 NGERIGQGKDNARTYLKERPELAREIENKVRASLGVPLL 339 >ref|ZP_08274403.1| RecA protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32123.1| RecA protein [Oxalobacteraceae bacterium IMCC9480] Length = 370 Score = 631 bits (1627), Expect = e-179, Method: Compositional matrix adjust. Identities = 315/341 (92%), Positives = 330/341 (96%) Query: 1 MDDKKSANNTEKGKALAAALAQIEKQFGKGSVMRMEDGAVLEEIQVVSTGSLGLDIALGV 60 MDDKK+ + ++K KALAAALAQIEKQFGKGSVMRM DGAV+EE+QVVSTGSLGLDIALGV Sbjct: 1 MDDKKAVSGSDKSKALAAALAQIEKQFGKGSVMRMADGAVVEEVQVVSTGSLGLDIALGV 60 Query: 61 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKIGGTCAFIDAEHALDVTYAQKLGVNLSD 120 GGLPRGRV+EIYGPESSGKTTLTLQ IAEMQK+GGTCAFIDAEHALDV YAQKLG+NLS+ Sbjct: 61 GGLPRGRVVEIYGPESSGKTTLTLQTIAEMQKLGGTCAFIDAEHALDVGYAQKLGINLSE 120 Query: 121 LLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 LLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 Query: 181 ALRKLTGSINRTSTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 ALRKLTGSINRT+T VIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 241 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 GDEVIG+ETKVKVVKNK+APPFREAHFDILYGEG SREGEILDLG+DAKIVEK+GAWYSY Sbjct: 241 GDEVIGNETKVKVVKNKIAPPFREAHFDILYGEGVSREGEILDLGADAKIVEKAGAWYSY 300 Query: 301 NGERIGQGKDNARNFLKERPELAREIENKVRASLGVPELAA 341 NGERIGQGKDNAR FLKERPELAREIENKVR SLGVPEL A Sbjct: 301 NGERIGQGKDNARTFLKERPELAREIENKVRVSLGVPELGA 341 >ref|YP_003774082.1| recombinase A protein [Herbaspirillum seropedicae SmR1] sp|Q9F672.2|RECA_HERSE RecName: Full=Protein RecA; AltName: Full=Recombinase A gb|AAG13409.2|AF297289_1 SOS repair protein RecA [Herbaspirillum seropedicae] gb|ADJ62174.1| recombinase A protein [Herbaspirillum seropedicae SmR1] Length = 351 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 320/348 (91%), Positives = 334/348 (95%) Query: 1 MDDKKSANNTEKGKALAAALAQIEKQFGKGSVMRMEDGAVLEEIQVVSTGSLGLDIALGV 60 MDDKK+ANN+EK KALAAALAQIEKQFGKGSVMRMEDG + EEIQ VSTGSLGLDIALG+ Sbjct: 1 MDDKKAANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGI 60 Query: 61 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKIGGTCAFIDAEHALDVTYAQKLGVNLSD 120 GGLPRGRVIEIYGPESSGKTTLTLQ+IAEMQK+GGTCAFIDAEHALDVTYAQKLGVNL+D Sbjct: 61 GGLPRGRVIEIYGPESSGKTTLTLQSIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLND 120 Query: 121 LLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 LLISQPDTGEQALEI DALVRSG VDLIV+DSVAALTP+AEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQ 180 Query: 181 ALRKLTGSINRTSTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 ALRKLTGSINRT+TTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 241 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGS+ K+VEKSGAWYSY Sbjct: 241 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSY 300 Query: 301 NGERIGQGKDNARNFLKERPELAREIENKVRASLGVPELAASGAGAAA 348 NGERIGQGKDNARN+LKE PELAREIENKVR +LGVPELA A A A Sbjct: 301 NGERIGQGKDNARNYLKEHPELAREIENKVRVALGVPELAGGEAEAEA 348