BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0101.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774092.1| hypothetical protein Hsero_0665 [Herbaspiril...   216   1e-54
ref|YP_004754438.1| alternative dihydrofolate reductase 3 [Colli...   191   3e-47
ref|YP_001100856.1| hypothetical protein HEAR2613 [Herminiimonas...   187   6e-46
ref|YP_001354540.1| hypothetical protein mma_2850 [Janthinobacte...   182   1e-44
ref|ZP_08275552.1| Alternative dihydrofolate reductase 3 [Oxalob...   176   9e-43

>ref|YP_003774092.1| hypothetical protein Hsero_0665 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62184.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 143

 Score =  216 bits (549), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 108/144 (75%), Positives = 120/144 (83%), Gaps = 2/144 (1%)

Query: 1   MPRAKLLHGSPDEIEAAYYDALSRADLDALMALWADDEEIVCIHPGAARLVGHVAIRNSW 60
           MPR  L+HGSPD+IEAAYYDAL+RADLDALMALWA+DEEIVCIHPGA RLVGH  IR  W
Sbjct: 1   MPRTTLIHGSPDDIEAAYYDALARADLDALMALWAEDEEIVCIHPGAQRLVGHAEIRAVW 60

Query: 61  EEILARGGLHIQPRQLHAAHTITTAVHNVIEEIHHPDNSQPDVHVIATNVYMKTAQGWRI 120
           E+IL+ GGLHI+PRQLHA   + T+VH+VIEEI H  N QPDVHVIATNVY+KTA GWRI
Sbjct: 61  EDILSSGGLHIRPRQLHATQNMMTSVHSVIEEIDH-GNEQPDVHVIATNVYLKTAMGWRI 119

Query: 121 VTHHASVAPGPAPSEPIAE-TMLH 143
           V HHASVAPG AP E +A   MLH
Sbjct: 120 VMHHASVAPGAAPVEAVASGAMLH 143


>ref|YP_004754438.1| alternative dihydrofolate reductase 3 [Collimonas fungivorans
           Ter331]
 gb|AEK63615.1| Alternative dihydrofolate reductase 3 [Collimonas fungivorans
           Ter331]
          Length = 143

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 83/143 (58%), Positives = 110/143 (76%)

Query: 1   MPRAKLLHGSPDEIEAAYYDALSRADLDALMALWADDEEIVCIHPGAARLVGHVAIRNSW 60
           MP  K +HGS +E E A+YDA+SRAD++A+MALWADD+EIVCIHP A RL GH AIR ++
Sbjct: 1   MPHVKFMHGSAEETETAFYDAMSRADIEAMMALWADDDEIVCIHPNATRLHGHAAIRAAF 60

Query: 61  EEILARGGLHIQPRQLHAAHTITTAVHNVIEEIHHPDNSQPDVHVIATNVYMKTAQGWRI 120
           E +  RGG+HI+ RQLH  H ++T++HN++EE+H    S  ++H++ATN+YMKT +GWRI
Sbjct: 61  ESLFERGGVHIRARQLHVTHNMSTSIHNLVEELHQASESDREMHILATNIYMKTPRGWRI 120

Query: 121 VTHHASVAPGPAPSEPIAETMLH 143
           V HHASVAPG AP E  +   LH
Sbjct: 121 VLHHASVAPGAAPEETTSSATLH 143


>ref|YP_001100856.1| hypothetical protein HEAR2613 [Herminiimonas arsenicoxydans]
 emb|CAL62735.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 143

 Score =  187 bits (474), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 85/143 (59%), Positives = 108/143 (75%)

Query: 1   MPRAKLLHGSPDEIEAAYYDALSRADLDALMALWADDEEIVCIHPGAARLVGHVAIRNSW 60
           MP+ +   G+ D+IE A YDA+ RADL+ALM LWADDEEIVCIHP   RL+G+ AIR SW
Sbjct: 1   MPKIRKQFGTADDIENALYDAIGRADLEALMELWADDEEIVCIHPDGTRLIGYAAIRTSW 60

Query: 61  EEILARGGLHIQPRQLHAAHTITTAVHNVIEEIHHPDNSQPDVHVIATNVYMKTAQGWRI 120
           EEI  RGG+HI+P QLH +H + +AVHN+IE +   + +Q DVH++ATNVY+KT  GWR+
Sbjct: 61  EEIFTRGGVHIRPLQLHTSHNVMSAVHNLIEAVFTIEGAQRDVHILATNVYVKTPLGWRL 120

Query: 121 VTHHASVAPGPAPSEPIAETMLH 143
           V HHAS APG A SE +A  +LH
Sbjct: 121 VLHHASTAPGKAKSELVANNVLH 143


>ref|YP_001354540.1| hypothetical protein mma_2850 [Janthinobacterium sp. Marseille]
 gb|ABR90957.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 142

 Score =  182 bits (462), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 107/143 (74%), Gaps = 1/143 (0%)

Query: 1   MPRAKLLHGSPDEIEAAYYDALSRADLDALMALWADDEEIVCIHPGAARLVGHVAIRNSW 60
           MP+A+   G+ D+IE A YDA+ RADLDALMALWADDEEIVCIHP   RL+G+ AIR SW
Sbjct: 1   MPKARKQFGTADDIEVALYDAIGRADLDALMALWADDEEIVCIHPDGTRLIGYAAIRASW 60

Query: 61  EEILARGGLHIQPRQLHAAHTITTAVHNVIEEIHHPDNSQPDVHVIATNVYMKTAQGWRI 120
           EEI  RGG+HI+P QLHA+     AVHN+IE ++  D +Q D+H+IATNVY+KT  GWRI
Sbjct: 61  EEIFTRGGVHIRPTQLHASQNTMNAVHNLIETVNTTD-TQRDIHIIATNVYIKTPLGWRI 119

Query: 121 VTHHASVAPGPAPSEPIAETMLH 143
           V HHAS+APG    E +   +LH
Sbjct: 120 VLHHASIAPGKPRPELVPSNVLH 142


>ref|ZP_08275552.1| Alternative dihydrofolate reductase 3 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF30984.1| Alternative dihydrofolate reductase 3 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 142

 Score =  176 bits (447), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 104/143 (72%), Gaps = 1/143 (0%)

Query: 1   MPRAKLLHGSPDEIEAAYYDALSRADLDALMALWADDEEIVCIHPGAARLVGHVAIRNSW 60
           M R K L GSPD+ EAA+YDAL RADL+ALMALWADDEEI CIHPGA RL+GH AIR SW
Sbjct: 1   MSRKKQLSGSPDDTEAAFYDALGRADLEALMALWADDEEITCIHPGAPRLIGHAAIRASW 60

Query: 61  EEILARGGLHIQPRQLHAAHTITTAVHNVIEEIHHPDNSQPDVHVIATNVYMKTAQGWRI 120
           + + A GG+HI P QLH    +  A H+V+E++   D +Q ++H++ATNVY+KT  GWRI
Sbjct: 61  QAVFAHGGVHIHPVQLHVMQNLMAATHSVLEQMRSGDITQ-ELHILATNVYIKTPMGWRI 119

Query: 121 VTHHASVAPGPAPSEPIAETMLH 143
             HHAS+APG  P   +  T LH
Sbjct: 120 AVHHASIAPGKPPVVVVDSTTLH 142