BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0081.p         (235 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001352046.1| hypothetical protein mma_0356 [Janthinobacte...   258   4e-67
ref|YP_001098664.1| putative signal peptide [Herminiimonas arsen...   257   1e-66
ref|YP_004754294.1| putative signal peptide protein [Collimonas ...   243   2e-62
ref|YP_003774110.1| signal peptide protein [Herbaspirillum serop...   234   1e-59
ref|YP_001858748.1| YceI family protein [Burkholderia phymatum S...   225   4e-57

>ref|YP_001352046.1| hypothetical protein mma_0356 [Janthinobacterium sp. Marseille]
 gb|ABR88459.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 189

 Score =  258 bits (660), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 125/156 (80%), Positives = 136/156 (87%), Gaps = 1/156 (0%)

Query: 1   MKLKLALISLLAATSVPAFAADTYTIDPSHTYPSFEADHMGISVWRGKFTKTSGTVTLDR 60
           MK KLALI LLAA +  AFA  TYTIDPSHTYPSFEADHMGISVWRGKF KTSGTV LDR
Sbjct: 1   MKSKLALICLLAAGASSAFA-QTYTIDPSHTYPSFEADHMGISVWRGKFEKTSGTVVLDR 59

Query: 61  AAKTGSLDITIDASSVDFGHAKLNDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDG 120
           AAKTGSL+I ID +S+DFGHAK+N+H K  D+F+V+KFPTATYK  SIKF+GDKPV+VDG
Sbjct: 60  AAKTGSLEIVIDTNSIDFGHAKMNEHAKSKDIFNVEKFPTATYKSKSIKFDGDKPVSVDG 119

Query: 121 ELTLHGVTKPVQLKINKFTCIQHPMLKREVCGADAS 156
           ELTL GVTKPV L INKF CIQHPMLKREVCGADAS
Sbjct: 120 ELTLLGVTKPVTLNINKFKCIQHPMLKREVCGADAS 155


>ref|YP_001098664.1| putative signal peptide [Herminiimonas arsenicoxydans]
 emb|CAL60535.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 189

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 122/159 (76%), Positives = 139/159 (87%), Gaps = 1/159 (0%)

Query: 1   MKLKLALISLLAATSVPAFAADTYTIDPSHTYPSFEADHMGISVWRGKFTKTSGTVTLDR 60
           MK K+ALI LLAA++  AFA  TYTIDPSHTYPSFEADHMGISVWRGKF KTSG+V LDR
Sbjct: 1   MKSKIALICLLAASATSAFA-QTYTIDPSHTYPSFEADHMGISVWRGKFDKTSGSVVLDR 59

Query: 61  AAKTGSLDITIDASSVDFGHAKLNDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDG 120
           AAKTGSLD+ +DA+S+DFGHAK+N+H K  D+F+V+KFPTATYK  +IKF+GDKPV+VDG
Sbjct: 60  AAKTGSLDLVVDATSIDFGHAKMNEHAKSKDLFNVEKFPTATYKSKAIKFDGDKPVSVDG 119

Query: 121 ELTLHGVTKPVQLKINKFTCIQHPMLKREVCGADASHAW 159
           ELTL GVTKPV L INKF CIQHPMLKREVCGADAS  +
Sbjct: 120 ELTLLGVTKPVTLAINKFKCIQHPMLKREVCGADASATF 158


>ref|YP_004754294.1| putative signal peptide protein [Collimonas fungivorans Ter331]
 gb|AEK63471.1| putative signal peptide protein [Collimonas fungivorans Ter331]
          Length = 190

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 112/138 (81%), Positives = 125/138 (90%)

Query: 22  DTYTIDPSHTYPSFEADHMGISVWRGKFTKTSGTVTLDRAAKTGSLDITIDASSVDFGHA 81
           DTYTIDP+HTYPSF ADHMGIS WRGKF KTSG+VTLDRAAKTGS+DI IDASS+DFGHA
Sbjct: 23  DTYTIDPNHTYPSFTADHMGISFWRGKFEKTSGSVTLDRAAKTGSVDIRIDASSLDFGHA 82

Query: 82  KLNDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDGELTLHGVTKPVQLKINKFTCI 141
           K+N+H  GPD+FDV+K+P  TYKGTS+KF+GDKPVAVDGELTLHGVTKPV L IN F CI
Sbjct: 83  KMNEHASGPDIFDVKKYPDVTYKGTSVKFDGDKPVAVDGELTLHGVTKPVTLTINSFKCI 142

Query: 142 QHPMLKREVCGADASHAW 159
           QHPMLKREVCGADAS ++
Sbjct: 143 QHPMLKREVCGADASASF 160


>ref|YP_003774110.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
 emb|CAM32615.1| Signal peptide protein [Herbaspirillum seropedicae]
 gb|ADJ62202.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
          Length = 190

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 107/135 (79%), Positives = 121/135 (89%), Gaps = 1/135 (0%)

Query: 22  DTYTIDPSHTYPSFEADHMGISVWRGKFTKTSGTVTLDRAAKTGSLDITIDASSVDFGHA 81
           DTY+IDPSHTYPSFEADHMG+S+WRGKF KTSGTVTLDRAAKTG++DITIDA+S+DFGHA
Sbjct: 23  DTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLDRAAKTGTVDITIDAASIDFGHA 82

Query: 82  KLNDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDGELTLHGVTKPVQLKINKFTCI 141
           K+N+H K  D+FDV K+PTA YKG +IKF GDKP  V+GELTLHGVTKPV L +NKF CI
Sbjct: 83  KMNEHAKSADMFDVAKYPTAQYKG-NIKFNGDKPATVEGELTLHGVTKPVTLTLNKFNCI 141

Query: 142 QHPMLKREVCGADAS 156
           QHPMLKREVCG DAS
Sbjct: 142 QHPMLKREVCGGDAS 156


>ref|YP_001858748.1| YceI family protein [Burkholderia phymatum STM815]
 gb|ACC71702.1| YceI family protein [Burkholderia phymatum STM815]
          Length = 189

 Score =  225 bits (573), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 127/149 (85%), Gaps = 1/149 (0%)

Query: 9   SLLAATSVPAFAADTYTIDPSHTYPSFEADHMG-ISVWRGKFTKTSGTVTLDRAAKTGSL 67
           +L ++ +  AFAADTY +DP+HTYPSFEADHMG +S WRGKFTK+SGTVTLDRAAKTG++
Sbjct: 8   ALASSMAAGAFAADTYQLDPTHTYPSFEADHMGGVSTWRGKFTKSSGTVTLDRAAKTGTV 67

Query: 68  DITIDASSVDFGHAKLNDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDGELTLHGV 127
           ++T+D SSV  G+ KL +H++ PD FDV K+PTATYKGTSIKF+GD PVAVDG+LT+ GV
Sbjct: 68  EVTVDTSSVQIGNTKLEEHLRSPDFFDVAKYPTATYKGTSIKFDGDTPVAVDGQLTMKGV 127

Query: 128 TKPVQLKINKFTCIQHPMLKREVCGADAS 156
           TKPV LKI  F CIQHP+LKREVCG +A+
Sbjct: 128 TKPVNLKIESFKCIQHPVLKREVCGVEAA 156