BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0068.p (371 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754282.1| NAD(P) transhydrogenase subunit alpha [Colli... 652 0.0 ref|YP_003774123.1| NAD(P) transhydrogenase alpha subunit [Herba... 646 0.0 ref|ZP_08275118.1| NAD(P) transhydrogenase alpha subunit [Oxalob... 619 e-175 ref|YP_297028.1| NAD(P)(+) transhydrogenase (AB-specific) [Ralst... 571 e-161 ref|YP_585105.1| NAD(P) transhydrogenase (Alpha subunit part 1) ... 566 e-159 >ref|YP_004754282.1| NAD(P) transhydrogenase subunit alpha [Collimonas fungivorans Ter331] gb|AEK63459.1| NAD(P) transhydrogenase alpha subunit [Collimonas fungivorans Ter331] Length = 371 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/371 (90%), Positives = 353/371 (95%) Query: 1 MRLGIPVESRDGETRVAATPETVKKLVAAKHEVLVESGAGTKSSITDEAYVAAGAVIAAA 60 M++GIP E+R GETRVAATPETVKKLVAAKH+VLV+SGAG SSITDEAY AAGA + A Sbjct: 1 MKIGIPAETRPGETRVAATPETVKKLVAAKHQVLVQSGAGISSSITDEAYAAAGAEVVTA 60 Query: 61 ADVYGAEALLKVRAPSADERARLKSGTVVVGILNPFDADNLAAMAAAGLTAFALEAAPRT 120 A +G E +LKVRAPS+DE A LKSGTVVVG+LNPFDADN+A MA+ GLTAFALEAAPRT Sbjct: 61 AAAFGVETVLKVRAPSSDELALLKSGTVVVGMLNPFDADNIAVMASHGLTAFALEAAPRT 120 Query: 121 TRAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI 180 +RAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI Sbjct: 121 SRAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI 180 Query: 181 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFITDEEKEIAQGVGGYARPMPADWMR 240 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFITDEEKEIAQGVGGYARPMPADWMR Sbjct: 181 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFITDEEKEIAQGVGGYARPMPADWMR 240 Query: 241 RQAELVHERAKQADIIITTALIPGRKAPVLISEETVKAMKPGSVILDMAVDQGGNCPLSE 300 RQAELVHERAKQADIIITTALIPGRKAPVLISE+TVKAMKPGSVILDMAVDQGGNCPLSE Sbjct: 241 RQAELVHERAKQADIIITTALIPGRKAPVLISEDTVKAMKPGSVILDMAVDQGGNCPLSE 300 Query: 301 PGKTVIKHGVHIIGEGNLAALVAADASALYSRNVLDFLKLIVDAEGKLVINREDDIVAAT 360 GKTVI+HGVHIIGEGNLAALVAADASALY+RN+LDFLKLI++AEG LVINREDDIVAAT Sbjct: 301 SGKTVIRHGVHIIGEGNLAALVAADASALYARNLLDFLKLIINAEGGLVINREDDIVAAT 360 Query: 361 LLCSGGEVLRK 371 LLCSGGEVLRK Sbjct: 361 LLCSGGEVLRK 371 >ref|YP_003774123.1| NAD(P) transhydrogenase alpha subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62215.1| NAD(P) transhydrogenase alpha subunit protein [Herbaspirillum seropedicae SmR1] Length = 371 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/371 (90%), Positives = 354/371 (95%) Query: 1 MRLGIPVESRDGETRVAATPETVKKLVAAKHEVLVESGAGTKSSITDEAYVAAGAVIAAA 60 MR+GIP ESRDGETRVAATPETVKKLVAAKHEV+V+S AG KSSI DEA+VA GA I +A Sbjct: 1 MRIGIPAESRDGETRVAATPETVKKLVAAKHEVMVQSAAGLKSSIPDEAFVAVGASIGSA 60 Query: 61 ADVYGAEALLKVRAPSADERARLKSGTVVVGILNPFDADNLAAMAAAGLTAFALEAAPRT 120 V+ AE LLKVRAP ERAR+K GTVV+G+LNPFDADN+AAMAAAGLTAFALEAAPRT Sbjct: 61 DAVFTAEILLKVRAPDQAERARIKPGTVVIGMLNPFDADNIAAMAAAGLTAFALEAAPRT 120 Query: 121 TRAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI 180 TRAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI Sbjct: 121 TRAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI 180 Query: 181 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFITDEEKEIAQGVGGYARPMPADWMR 240 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPF+T+EEKEIAQGVGGYARPMP DWM+ Sbjct: 181 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFLTEEEKEIAQGVGGYARPMPPDWMK 240 Query: 241 RQAELVHERAKQADIIITTALIPGRKAPVLISEETVKAMKPGSVILDMAVDQGGNCPLSE 300 RQAELVHERAKQADIIITTALIPGRKAPVLISE+TVKAMKPGSVILDMAVDQGGNCPLSE Sbjct: 241 RQAELVHERAKQADIIITTALIPGRKAPVLISEDTVKAMKPGSVILDMAVDQGGNCPLSE 300 Query: 301 PGKTVIKHGVHIIGEGNLAALVAADASALYSRNVLDFLKLIVDAEGKLVINREDDIVAAT 360 PGKTVIKHGVHIIGEGNLAALVAADASALY+RNVLDFLKLI+DAEGKLVINREDDIVAAT Sbjct: 301 PGKTVIKHGVHIIGEGNLAALVAADASALYARNVLDFLKLIIDAEGKLVINREDDIVAAT 360 Query: 361 LLCSGGEVLRK 371 LLC GGE+LRK Sbjct: 361 LLCQGGEILRK 371 >ref|ZP_08275118.1| NAD(P) transhydrogenase alpha subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF31414.1| NAD(P) transhydrogenase alpha subunit [Oxalobacteraceae bacterium IMCC9480] Length = 371 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 311/371 (83%), Positives = 339/371 (91%) Query: 1 MRLGIPVESRDGETRVAATPETVKKLVAAKHEVLVESGAGTKSSITDEAYVAAGAVIAAA 60 M++GIP E+R GETRVAATPETVKKL+AAKH V+V+SGAG +S+TDEAYVAAGA I +A Sbjct: 1 MKIGIPAETRQGETRVAATPETVKKLIAAKHTVVVQSGAGVLASVTDEAYVAAGATIGSA 60 Query: 61 ADVYGAEALLKVRAPSADERARLKSGTVVVGILNPFDADNLAAMAAAGLTAFALEAAPRT 120 AD + A +LKVRAPSADE L SGTVV+G+LNPFD DN AAMAA GL AFALEAAPR Sbjct: 61 ADAFAAAMVLKVRAPSADELPLLASGTVVIGMLNPFDTDNTAAMAAHGLIAFALEAAPRI 120 Query: 121 TRAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI 180 TRAQSMDVLSSQANIAGYKAVL+AANTYQRFMPMLMTAAGTVKAARMLIMG GVAGLQAI Sbjct: 121 TRAQSMDVLSSQANIAGYKAVLLAANTYQRFMPMLMTAAGTVKAARMLIMGVGVAGLQAI 180 Query: 181 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFITDEEKEIAQGVGGYARPMPADWMR 240 ATAKRLGAVIEASDVRP VKEQ+ESLGAKFLDVP++TDEEKEIAQG GGYAR MPADWMR Sbjct: 181 ATAKRLGAVIEASDVRPPVKEQVESLGAKFLDVPYLTDEEKEIAQGTGGYARAMPADWMR 240 Query: 241 RQAELVHERAKQADIIITTALIPGRKAPVLISEETVKAMKPGSVILDMAVDQGGNCPLSE 300 RQAELVHERAK ADIIITTALIPGRKAP+LI E+TVKAMKPGSVI+DMAV+QGGNCPLSE Sbjct: 241 RQAELVHERAKLADIIITTALIPGRKAPILIGEDTVKAMKPGSVIVDMAVEQGGNCPLSE 300 Query: 301 PGKTVIKHGVHIIGEGNLAALVAADASALYSRNVLDFLKLIVDAEGKLVINREDDIVAAT 360 GKTV K+GVHIIGE NLA L+AADASALY+RNVLDFLKLIVDA+G L +NR+D+IVAAT Sbjct: 301 LGKTVTKYGVHIIGEPNLATLLAADASALYARNVLDFLKLIVDADGALAVNRDDEIVAAT 360 Query: 361 LLCSGGEVLRK 371 LLCSGGEVLRK Sbjct: 361 LLCSGGEVLRK 371 >ref|YP_297028.1| NAD(P)(+) transhydrogenase (AB-specific) [Ralstonia eutropha JMP134] gb|AAZ62184.1| NAD(P)(+) transhydrogenase (AB-specific) [Ralstonia eutropha JMP134] Length = 373 Score = 571 bits (1472), Expect = e-161, Method: Compositional matrix adjust. Identities = 280/371 (75%), Positives = 323/371 (87%) Query: 1 MRLGIPVESRDGETRVAATPETVKKLVAAKHEVLVESGAGTKSSITDEAYVAAGAVIAAA 60 M +GIP E+R GETRVAATPETVKK VA H+V+V++GAG ++S D AY A GA I A Sbjct: 1 MYIGIPQETRAGETRVAATPETVKKYVAQGHKVVVQAGAGVRASQPDSAYEAVGATIGTA 60 Query: 61 ADVYGAEALLKVRAPSADERARLKSGTVVVGILNPFDADNLAAMAAAGLTAFALEAAPRT 120 AD +GA+ +LKVRAP A E A ++ G+ +VG+LNPFDA+N A MAAA +TAFALEAAPRT Sbjct: 61 ADAFGADLVLKVRAPEAAELALMRPGSALVGMLNPFDAENNARMAAASVTAFALEAAPRT 120 Query: 121 TRAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI 180 TRAQSMDVLSSQANIAGYKAVL+AA+ YQRFMPMLMTAAGTVKAAR+LI+GAGVAGLQAI Sbjct: 121 TRAQSMDVLSSQANIAGYKAVLVAAHHYQRFMPMLMTAAGTVKAARVLILGAGVAGLQAI 180 Query: 181 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFITDEEKEIAQGVGGYARPMPADWMR 240 ATAKRLGAVIEASDVRPAVKEQIESLG KFLDVPF+TDEE+EIAQGVGGYARPMP DWMR Sbjct: 181 ATAKRLGAVIEASDVRPAVKEQIESLGGKFLDVPFVTDEEREIAQGVGGYARPMPPDWMR 240 Query: 241 RQAELVHERAKQADIIITTALIPGRKAPVLISEETVKAMKPGSVILDMAVDQGGNCPLSE 300 RQAELVHERAKQADIIITTALIPGRKAPVL+ EETV+ MKPGSV++D+A QGGNCPL+ Sbjct: 241 RQAELVHERAKQADIIITTALIPGRKAPVLLQEETVQQMKPGSVVVDLAAAQGGNCPLTV 300 Query: 301 PGKTVIKHGVHIIGEGNLAALVAADASALYSRNVLDFLKLIVDAEGKLVINREDDIVAAT 360 + V +HGV +G NLA++VAADASALY+RNVLDFLKL++D +G +N EDDIVAA Sbjct: 301 ADEVVERHGVIFVGHTNLASMVAADASALYARNVLDFLKLVIDKDGNFTLNLEDDIVAAC 360 Query: 361 LLCSGGEVLRK 371 L+C+GGEV+RK Sbjct: 361 LMCNGGEVVRK 371 >ref|YP_585105.1| NAD(P) transhydrogenase (Alpha subunit part 1) oxidoreductase protein [Cupriavidus metallidurans CH34] gb|ABF09836.1| NAD(P) transhydrogenase (Alpha subunit part 1) oxidoreductase protein [Cupriavidus metallidurans CH34] Length = 401 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 279/371 (75%), Positives = 322/371 (86%) Query: 1 MRLGIPVESRDGETRVAATPETVKKLVAAKHEVLVESGAGTKSSITDEAYVAAGAVIAAA 60 M +GIP+E+R GE RVAATPETVKK VA H+V V++GAG ++SI D A+ AAGA I +A Sbjct: 29 MHIGIPLETRAGEARVAATPETVKKYVAQGHQVTVQAGAGIRASIPDAAFEAAGARIGSA 88 Query: 61 ADVYGAEALLKVRAPSADERARLKSGTVVVGILNPFDADNLAAMAAAGLTAFALEAAPRT 120 AD GAE LLKVRAP ERA++K G V+VG+LNPFD +N A MA+A +TAFALEAAPRT Sbjct: 89 ADALGAELLLKVRAPDDAERAQIKPGAVLVGMLNPFDIENNARMASAAITAFALEAAPRT 148 Query: 121 TRAQSMDVLSSQANIAGYKAVLMAANTYQRFMPMLMTAAGTVKAARMLIMGAGVAGLQAI 180 TRAQSMDVLSSQANIAGYKAVL AA+ YQRFMPMLMTAAGTVKAAR+LI+GAGVAGLQAI Sbjct: 149 TRAQSMDVLSSQANIAGYKAVLEAAHHYQRFMPMLMTAAGTVKAARVLILGAGVAGLQAI 208 Query: 181 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFITDEEKEIAQGVGGYARPMPADWMR 240 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPF+TDEE+EIAQGVGGYARPMPADWMR Sbjct: 209 ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFLTDEEREIAQGVGGYARPMPADWMR 268 Query: 241 RQAELVHERAKQADIIITTALIPGRKAPVLISEETVKAMKPGSVILDMAVDQGGNCPLSE 300 RQAELVH+RA QADI+ITTALIPGR+APVL+ EETVK MKPGSV++D+A QGGNCPL+ Sbjct: 269 RQAELVHQRATQADIVITTALIPGRRAPVLLQEETVKQMKPGSVVVDLAAAQGGNCPLTV 328 Query: 301 PGKTVIKHGVHIIGEGNLAALVAADASALYSRNVLDFLKLIVDAEGKLVINREDDIVAAT 360 + V +HGV +IG NLA +VAADASALY+RNVLDFLKLI+D + + +N EDDIVAA Sbjct: 329 ADEVVERHGVTLIGHTNLAGMVAADASALYARNVLDFLKLIIDKDARYTLNLEDDIVAAC 388 Query: 361 LLCSGGEVLRK 371 L+C G+V+R+ Sbjct: 389 LMCKDGQVIRE 399