BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0066.p         (105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774125.1| transmembrane NAD(P) transhydrogenase subuni...   195   2e-48
ref|ZP_08275119.1| NAD(P) transhydrogenase alpha subunit [Oxalob...   181   4e-44
ref|YP_293242.1| NAD(P) transhydrogenase subunit alpha [Ralstoni...   178   2e-43
ref|YP_001888009.1| NAD(P) transhydrogenase subunit alpha 2 [Bur...   177   6e-43
ref|YP_725366.1| NAD(P) transhydrogenase subunit alpha 2 [Ralsto...   176   9e-43

>ref|YP_003774125.1| transmembrane NAD(P) transhydrogenase subunit alpha [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ62217.1| transmembrane NAD(P) transhydrogenase (alpha subunit) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 104

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/102 (96%), Positives = 100/102 (98%)

Query: 1   MEVSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIIGAMLAAGLTEGP 60
           MEVSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIIGAMLAAGLTEGP
Sbjct: 1   MEVSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIIGAMLAAGLTEGP 60

Query: 61  VGRIAGTLAVALAAVNVFGGFMVTQRMLEMFKKKEPKTKTDK 102
           VGRIAGTLAVALAAVNVFGGFMVTQRMLEMFKKKEPK K+ +
Sbjct: 61  VGRIAGTLAVALAAVNVFGGFMVTQRMLEMFKKKEPKAKSGE 102


>ref|ZP_08275119.1| NAD(P) transhydrogenase alpha subunit [Oxalobacteraceae bacterium
          IMCC9480]
 gb|EGF31415.1| NAD(P) transhydrogenase alpha subunit [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 108

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 90/97 (92%), Positives = 95/97 (97%)

Query: 1  MEVSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIIGAMLAAGLTEGP 60
          MEVSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIII+GAMLAAGLTEG 
Sbjct: 1  MEVSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIVGAMLAAGLTEGR 60

Query: 61 VGRIAGTLAVALAAVNVFGGFMVTQRMLEMFKKKEPK 97
          +G++ GTLAVALAAVNVFGGF+VTQRMLEMFKKKEPK
Sbjct: 61 LGQVMGTLAVALAAVNVFGGFLVTQRMLEMFKKKEPK 97


>ref|YP_293242.1| NAD(P) transhydrogenase subunit alpha [Ralstonia eutropha JMP134]
 gb|AAZ65385.1| NAD(P) transhydrogenase subunit alpha [Ralstonia eutropha JMP134]
          Length = 118

 Score =  178 bits (451), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/95 (91%), Positives = 92/95 (96%)

Query: 3  VSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIIGAMLAAGLTEGPVG 62
          V+HT+INLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIII+GAMLAAGLTEGP G
Sbjct: 4  VNHTVINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIVGAMLAAGLTEGPAG 63

Query: 63 RIAGTLAVALAAVNVFGGFMVTQRMLEMFKKKEPK 97
          R+ GTLAVALAAVNVFGGFMVTQRMLEMF+KK PK
Sbjct: 64 RVMGTLAVALAAVNVFGGFMVTQRMLEMFRKKAPK 98


>ref|YP_001888009.1| NAD(P) transhydrogenase subunit alpha 2 [Burkholderia phytofirmans
           PsJN]
 gb|ACD18639.1| NAD(P) transhydrogenase subunit alpha 2 [Burkholderia phytofirmans
           PsJN]
          Length = 118

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 86/97 (88%), Positives = 93/97 (95%)

Query: 3   VSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIIGAMLAAGLTEGPVG 62
           V+HT+INLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAIS III+GAMLAAGLTEG VG
Sbjct: 4   VNHTVINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISGIIIVGAMLAAGLTEGSVG 63

Query: 63  RIAGTLAVALAAVNVFGGFMVTQRMLEMFKKKEPKTK 99
           R+AGTLAVALAAVNVFGGF+VTQRMLEMF+KK PK +
Sbjct: 64  RVAGTLAVALAAVNVFGGFLVTQRMLEMFRKKSPKAQ 100


>ref|YP_725366.1| NAD(P) transhydrogenase subunit alpha 2 [Ralstonia eutropha H16]
 emb|CAJ91998.1| NAD(P) transhydrogenase subunit alpha 2 [Ralstonia eutropha H16]
          Length = 116

 Score =  176 bits (447), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 88/102 (86%), Positives = 94/102 (92%)

Query: 3   VSHTIINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIIGAMLAAGLTEGPVG 62
           VSHT+INLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIII+GAMLAAGLTEG VG
Sbjct: 4   VSHTVINLIIFVLAIYVGYHVVWTVTPALHTPLMAVTNAISAIIIVGAMLAAGLTEGYVG 63

Query: 63  RIAGTLAVALAAVNVFGGFMVTQRMLEMFKKKEPKTKTDKAG 104
           R  GTLAVALAAVNVFGGF+VTQRMLEMF+KK PK + +  G
Sbjct: 64  RAMGTLAVALAAVNVFGGFLVTQRMLEMFRKKAPKAQPEAKG 105