BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0060.p (223 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352105.1| nucleotidyl transferase [Janthinobacterium s... 370 e-101 ref|YP_001098717.1| putative nucleotidyl transferase [Herminiimo... 362 3e-98 ref|YP_003774130.1| nucleoside-diphosphate-sugar pyrophosphoryla... 357 6e-97 ref|YP_004754275.1| putative nucleotidyl transferase [Collimonas... 339 2e-91 ref|ZP_08273515.1| Glucose-1-phosphate thymidylyltransferase [Ox... 335 4e-90 >ref|YP_001352105.1| nucleotidyl transferase [Janthinobacterium sp. Marseille] gb|ABR90675.1| nucleotidyl transferase [Janthinobacterium sp. Marseille] Length = 238 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 174/222 (78%), Positives = 197/222 (88%) Query: 1 MRPLTDTCPKPLLKVRGRPLIVWQILNLVRAGITEIVINHAHLGHLLEETLGDGSQFGAQ 60 MRPLTDTCPKPLL VRGRPLIVW ILNLVRAGIT+IVINHAHLG+L+EETLGDG+QFGA+ Sbjct: 14 MRPLTDTCPKPLLTVRGRPLIVWHILNLVRAGITDIVINHAHLGNLIEETLGDGTQFGAR 73 Query: 61 IQYSAEGTALETAGGIAKARHLLGEEVFVAISGDIYIPHFDFEQVKTVLEDNDLWGNPIP 120 I YSAEGTALETAGG+AKARHLLG+E F+A++ DIY PHF+FEQVK VLED D+WGNP P Sbjct: 74 ISYSAEGTALETAGGVAKARHLLGDEPFLALAADIYCPHFNFEQVKNVLEDADVWGNPYP 133 Query: 121 LDKRDVAWIYLVKNPQHHPTGDFALNSFSIANEGSPLFTFANIGVYRPQMFDAIAPGEHA 180 +D+RDVAW+YLVKNP HHP GDFAL+SFS+ANEG P TF+ IGVYRP MFDAIA GE A Sbjct: 134 VDQRDVAWLYLVKNPAHHPQGDFALHSFSVANEGEPKLTFSGIGVYRPSMFDAIAAGESA 193 Query: 181 KLGPLLREYAARGQVGGEIYRGEWINVGTVEQLEELNTPLAG 222 KL LLREYAARGQ+GGE+Y G+W +VGTVE+L ELN PL G Sbjct: 194 KLVTLLREYAARGQLGGELYHGDWTDVGTVERLAELNAPLTG 235 >ref|YP_001098717.1| putative nucleotidyl transferase [Herminiimonas arsenicoxydans] emb|CAL60588.1| putative dTDP-glucose pyrophosphorylase RfbA [Herminiimonas arsenicoxydans] Length = 236 Score = 362 bits (928), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 169/222 (76%), Positives = 192/222 (86%) Query: 1 MRPLTDTCPKPLLKVRGRPLIVWQILNLVRAGITEIVINHAHLGHLLEETLGDGSQFGAQ 60 MRPLTDTCPKPLLKVRGRPLIVW ILNLVRAGI +IVINHAHLG ++EE LG+G QFGA Sbjct: 14 MRPLTDTCPKPLLKVRGRPLIVWHILNLVRAGIKDIVINHAHLGGMIEEALGNGEQFGAN 73 Query: 61 IQYSAEGTALETAGGIAKARHLLGEEVFVAISGDIYIPHFDFEQVKTVLEDNDLWGNPIP 120 + YSAEG ALETAGG+A+ARHLLG+E F+A++ DIY PHFDF+QV+ VLEDND+WGNP P Sbjct: 74 LIYSAEGEALETAGGVAQARHLLGDEPFLALAADIYCPHFDFKQVRGVLEDNDVWGNPYP 133 Query: 121 LDKRDVAWIYLVKNPQHHPTGDFALNSFSIANEGSPLFTFANIGVYRPQMFDAIAPGEHA 180 LD+RDVAW+YLVKNP HH GDFAL+SFSIANEG P TF+ IGVYRP MFD+I GE A Sbjct: 134 LDQRDVAWLYLVKNPSHHLQGDFALHSFSIANEGEPRLTFSGIGVYRPSMFDSITAGESA 193 Query: 181 KLGPLLREYAARGQVGGEIYRGEWINVGTVEQLEELNTPLAG 222 KL PLLREYAARGQVGGE+YRG+W +VGT E+L ELN PL G Sbjct: 194 KLAPLLREYAARGQVGGELYRGDWTDVGTAERLAELNAPLTG 235 >ref|YP_003774130.1| nucleoside-diphosphate-sugar pyrophosphorylase subunits gamma/epsilon [Herbaspirillum seropedicae SmR1] gb|ADJ62222.1| nucleoside-diphosphate-sugar pyrophosphorylase, gamma/epsilon subunits protein [Herbaspirillum seropedicae SmR1] Length = 238 Score = 357 bits (917), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 165/222 (74%), Positives = 196/222 (88%) Query: 1 MRPLTDTCPKPLLKVRGRPLIVWQILNLVRAGITEIVINHAHLGHLLEETLGDGSQFGAQ 60 MRPLTD+CPKPLLKVRGRPLIVWQIL+LVRAGITEIVINHAHLG ++E+TLGDGS+FGA+ Sbjct: 14 MRPLTDSCPKPLLKVRGRPLIVWQILSLVRAGITEIVINHAHLGQMIEDTLGDGSRFGAR 73 Query: 61 IQYSAEGTALETAGGIAKARHLLGEEVFVAISGDIYIPHFDFEQVKTVLEDNDLWGNPIP 120 + YS EGTALETAGGIA+ARHLLGE+ F+A+SGDI+ PHFD+ ++ TVLED D WG P+P Sbjct: 74 LLYSPEGTALETAGGIAQARHLLGEQPFIAVSGDIWCPHFDYSELLTVLEDEDPWGKPLP 133 Query: 121 LDKRDVAWIYLVKNPQHHPTGDFALNSFSIANEGSPLFTFANIGVYRPQMFDAIAPGEHA 180 D+RD+AW+YLVKNP HP GDFALN+F++ANEG P TFANIGVYRPQMFD I PG HA Sbjct: 134 EDQRDMAWLYLVKNPPFHPEGDFALNNFALANEGQPKLTFANIGVYRPQMFDGIPPGTHA 193 Query: 181 KLGPLLREYAARGQVGGEIYRGEWINVGTVEQLEELNTPLAG 222 KLGPLLR+YA +G++GG++YRGEW NVGT++QLE LN P G Sbjct: 194 KLGPLLRQYADQGRIGGDVYRGEWHNVGTIDQLEALNLPPQG 235 >ref|YP_004754275.1| putative nucleotidyl transferase [Collimonas fungivorans Ter331] gb|AEK63452.1| putative nucleotidyl transferase [Collimonas fungivorans Ter331] Length = 235 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 162/222 (72%), Positives = 184/222 (82%), Gaps = 2/222 (0%) Query: 1 MRPLTDTCPKPLLKVRGRPLIVWQILNLVRAGITEIVINHAHLGHLLEETLGDGSQFGAQ 60 MRPLTDT PKPLLKVRGRPLIVW I+NLVRAGITEIVINHAHLG ++E+TLGDGS+FGA Sbjct: 14 MRPLTDTTPKPLLKVRGRPLIVWHIVNLVRAGITEIVINHAHLGQMIEDTLGDGSKFGAT 73 Query: 61 IQYSAEGTALETAGGIAKARHLLGEEVFVAISGDIYIPHFDFEQVKTVLEDNDLWGNPIP 120 I YS E ALETAGGIA ARHLLGE FVAI+GD+Y PHFDF QVK LEDND+WG P Sbjct: 74 IAYSPEAVALETAGGIANARHLLGEAPFVAIAGDVYCPHFDFAQVKHTLEDNDIWGQPYA 133 Query: 121 LDKRDVAWIYLVKNPQHHPTGDFALNSFSIANEGSP--LFTFANIGVYRPQMFDAIAPGE 178 LDKRD AW+YLVKNP HHP GDF L+SFS++N+G +TF+ IGVYRP MFDA+ G+ Sbjct: 134 LDKRDNAWLYLVKNPPHHPQGDFGLHSFSVSNDGEAGHTYTFSGIGVYRPDMFDAVNAGQ 193 Query: 179 HAKLGPLLREYAARGQVGGEIYRGEWINVGTVEQLEELNTPL 220 KL LLREYAARGQ+GGEIYRGEW +VGT+E+L +LN PL Sbjct: 194 PEKLVTLLREYAARGQIGGEIYRGEWTDVGTIERLNQLNAPL 235 >ref|ZP_08273515.1| Glucose-1-phosphate thymidylyltransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33010.1| Glucose-1-phosphate thymidylyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 239 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 156/220 (70%), Positives = 182/220 (82%) Query: 1 MRPLTDTCPKPLLKVRGRPLIVWQILNLVRAGITEIVINHAHLGHLLEETLGDGSQFGAQ 60 MRPLTDTCPKPLLKVRGRPLIVW ILNLVRAGITEIVINHAHLG L + LGDGSQFGA Sbjct: 14 MRPLTDTCPKPLLKVRGRPLIVWHILNLVRAGITEIVINHAHLGQQLVDALGDGSQFGAT 73 Query: 61 IQYSAEGTALETAGGIAKARHLLGEEVFVAISGDIYIPHFDFEQVKTVLEDNDLWGNPIP 120 +QYSAE TAL+TAGGIA+A LLG+ FV ++GDIY PHFDFEQVK+ L D D+WGNP P Sbjct: 74 LQYSAEATALDTAGGIAQALPLLGDAPFVVVNGDIYCPHFDFEQVKSALVDADMWGNPYP 133 Query: 121 LDKRDVAWIYLVKNPQHHPTGDFALNSFSIANEGSPLFTFANIGVYRPQMFDAIAPGEHA 180 D+RD+ WIYLVKNP H P GDF L +F++ N+G+P FTF+ IGVYRP++F G A Sbjct: 134 ADQRDIGWIYLVKNPPHVPDGDFGLTTFAVNNDGTPRFTFSGIGVYRPELFATTIAGTPA 193 Query: 181 KLGPLLREYAARGQVGGEIYRGEWINVGTVEQLEELNTPL 220 KL PLLRE+AARGQ+GGE+YRG+WI+VGT E+L +LN PL Sbjct: 194 KLAPLLREFAARGQIGGEVYRGDWIDVGTPERLAQLNRPL 233