BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0057.p (464 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774133.1| parvulin-like peptidyl-prolyl cis-trans isom... 604 e-171 ref|ZP_08273518.1| Survival protein SurA precursor (Peptidyl-pro... 530 e-148 ref|YP_001098720.1| periplasmic peptidyl-prolyl cis-trans isomer... 529 e-148 ref|YP_004754272.1| Survival protein surA (peptidyl-prolyl cis-t... 517 e-144 ref|YP_001352108.1| peptidyl-prolyl cis-trans isomerase SurA [Ja... 512 e-143 >ref|YP_003774133.1| parvulin-like peptidyl-prolyl cis-trans isomerase [Herbaspirillum seropedicae SmR1] emb|CAM32660.1| Parvulin-like peptidyl-prolyl [Herbaspirillum seropedicae] gb|ADJ62225.1| parvulin-like peptidyl-prolyl cis-trans isomerase protein [Herbaspirillum seropedicae SmR1] Length = 496 Score = 604 bits (1558), Expect = e-171, Method: Compositional matrix adjust. Identities = 326/499 (65%), Positives = 381/499 (76%), Gaps = 51/499 (10%) Query: 9 RHPLARITSGIV-LMCMSFGMIGSAQAQFAATATPAVPGLQLPPTATPAPAPAAATSRA- 66 R PL T + L+CM G+I +AQAQFA T P P P + PAPA A Sbjct: 5 RTPLLATTKTVTALLCM-LGVISNAQAQFATTIIPVTP-----PETSAQPAPANGKPPAA 58 Query: 67 ---------------------------PRPVDSILVVVNNDVITRQELSERLASVQKRLT 99 PRPVDSI+VVVNN+VITRQE+++RLASV KR++ Sbjct: 59 SPAAPAKAAAPAPAKATAAAPSQARVEPRPVDSIMVVVNNEVITRQEVADRLASVVKRMS 118 Query: 100 AQGVALPPRNQLQSQLLERMIVERAXDHPA---------------ILRIAEQNKMSLADF 144 AQ V LPPR+QL QL+ERMIVERA A + RIA+QNK+S+A F Sbjct: 119 AQNVQLPPRDQLVRQLVERMIVERAQAQMAKENGIVVDDAMLDRAMQRIADQNKLSMAQF 178 Query: 145 RVQLEREGMAYPAFREDIRREIIMQRLREREVDNKVLVSESEVDNYLAAENNTSVKHEDL 204 R +LE EGM Y +FRE+IRREI+ QRLREREVDNKV+V+ESEVDNYLAAE N + ++L Sbjct: 179 RTRLEAEGMNYASFREEIRREILSQRLREREVDNKVVVTESEVDNYLAAEANAGGQRQEL 238 Query: 205 NLAQILVRVPENASPEQVAARRQRAEEVLRQLKTGADFAKTAATYSDSSDALSGGDLGWR 264 ++AQIL+RVPENA+P+Q+A RR+RAE+VLRQLKTGADFAKTAA YSD+SDALSGGDLGWR Sbjct: 239 DIAQILIRVPENATPDQLAQRRERAEDVLRQLKTGADFAKTAAAYSDASDALSGGDLGWR 298 Query: 265 AQDRLPQLFLDAVASLKPGEVSSIVKSGNGFHILKLIDRRNASATGKAGAPAVEQTHARH 324 DRLPQLFLD VA L+ G+VS ++KSGNGFHILKL+ RR A A AV+QTH RH Sbjct: 299 PADRLPQLFLDGVAKLQDGQVSGLLKSGNGFHILKLVGRRTADGAQAAAP-AVQQTHVRH 357 Query: 325 ILIKVNQVVSAAEARRKLLELKERLDHKAATFEELAKLYSNDLSASKGGDLGWIYPGDTV 384 ILIKVNQVV+AAEA+RKL ELKERLDH +ATFEELAKLYSNDLSASKGGDLGW+YPGDTV Sbjct: 358 ILIKVNQVVTAAEAKRKLTELKERLDHGSATFEELAKLYSNDLSASKGGDLGWVYPGDTV 417 Query: 385 PEFERAMNELKPGEVSQPIESPFGFHLIQVVERKTDDGSQERARLAARQAIRERKIDEAT 444 PEFERAM++LKPGEVSQPIE+PFG+HLIQVVERKTDD S+ERAR AARQAIRERKIDEAT Sbjct: 418 PEFERAMDQLKPGEVSQPIETPFGYHLIQVVERKTDDASKERARQAARQAIRERKIDEAT 477 Query: 445 EDWLRQLRDRAYVEFRTDD 463 EDW+RQ+RDRAYVE+R D+ Sbjct: 478 EDWMRQIRDRAYVEYRNDE 496 >ref|ZP_08273518.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Oxalobacteraceae bacterium IMCC9480] gb|EGF33013.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Oxalobacteraceae bacterium IMCC9480] Length = 475 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 269/415 (64%), Positives = 331/415 (79%), Gaps = 18/415 (4%) Query: 67 PRPVDSILVVVNNDVITRQELSERLASVQKRLTAQGVALPPRNQLQSQLLERMIVERAXD 126 P+ +DSI+ VVN+DVITR +L+ R+A V+ R+ QG LP R L+ Q+LERMIV+RA Sbjct: 60 PQVIDSIVAVVNSDVITRLDLNSRVALVETRMKQQGSQLPQRALLEKQILERMIVDRAQL 119 Query: 127 H---------------PAILRIAEQNKMSLADFRVQLEREGMAYPAFREDIRREIIMQRL 171 A+ R+AEQNK+S+ DFR QLEREG + FRE+IR EI MQR+ Sbjct: 120 QLAADSGIKIDDVMLDRAMARLAEQNKLSMQDFRNQLEREGTPFSRFREEIREEIAMQRI 179 Query: 172 REREVDNKVLVSESEVDNYLAAENNTSVKHEDLNLAQILVRVPENASPEQVAARRQRAEE 231 REREVDNK+ ++ESEVDNYL AE N + NLAQIL+R+PENA+ EQ+AARR RA++ Sbjct: 180 REREVDNKLQITESEVDNYLDAEKNAPQIQPEYNLAQILIRIPENATAEQIAARRARADD 239 Query: 232 VLRQLKTGADFAKTAATYSDSSDALSGGDLGWRAQDRLPQLFLDAVASLKPGEVSSIVKS 291 V RQL++GADFAK AA+YSDS +AL GG+LGWR DRLPQLF+DAVA L GE+S+++KS Sbjct: 240 VARQLRSGADFAKLAASYSDSIEALKGGELGWRTADRLPQLFVDAVARLNEGELSAVIKS 299 Query: 292 GNGFHILKLIDRRN---ASATGKAGAPAVEQTHARHILIKVNQVVSAAEARRKLLELKER 348 +GFHILK+ +R S+T A APAV+QT ARHILIKVN +V+AAEA RKL +LK+R Sbjct: 300 ASGFHILKVAGKRTRSADSSTASAAAPAVQQTRARHILIKVNTIVTAAEALRKLTDLKQR 359 Query: 349 LDHKAATFEELAKLYSNDLSASKGGDLGWIYPGDTVPEFERAMNELKPGEVSQPIESPFG 408 LD+KAATFEELAKLYSNDLSASKGGDLGWIYPGDTVPEFERAMN LKPGEVS PIE+PFG Sbjct: 360 LDNKAATFEELAKLYSNDLSASKGGDLGWIYPGDTVPEFERAMNLLKPGEVSAPIETPFG 419 Query: 409 FHLIQVVERKTDDGSQERARLAARQAIRERKIDEATEDWLRQLRDRAYVEFRTDD 463 +HLI+V+ERK+ D SQER RL+ARQA+RERK++EAT+DW+RQLRDRAYVE+R +D Sbjct: 420 YHLIEVIERKSQDVSQERKRLSARQALRERKLEEATQDWIRQLRDRAYVEYRLED 474 >ref|YP_001098720.1| periplasmic peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Herminiimonas arsenicoxydans] emb|CAL60591.1| Chaperone SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (Rotamase SurA) [Herminiimonas arsenicoxydans] Length = 469 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 268/429 (62%), Positives = 331/429 (77%), Gaps = 23/429 (5%) Query: 58 APAAATSR-APRPVDSILVVVNNDVITRQELSERLASVQKRLTAQGVALPPRNQLQSQLL 116 AP A+TSR PR D+ILVVVNN+VITR E ERL ++ RL QG +PP QLQ QLL Sbjct: 40 APNASTSRLQPRLADAILVVVNNEVITRYEFIERLKVIENRLKGQGGQMPPMEQLQRQLL 99 Query: 117 ERMIVERAXDHPA---------------ILRIAEQNKMSLADFRVQLEREGMAYPAFRED 161 ERMIVERA A + RIA+QN++++ +FR +LE++GM Y FRE+ Sbjct: 100 ERMIVERAQLQQAKESGIKVDDAMLDRAVARIADQNQLTMPEFRKRLEQDGMVYFQFREE 159 Query: 162 IRREIIMQRLREREVDNKVLVSESEVDNYLAAENNTSVKH-EDLNLAQILVRVPENASPE 220 IR E+I+QRLREREVDNK+ VS++EVD Y+A + T+ ++LNL QIL+RVPENA+P+ Sbjct: 160 IRSEMILQRLREREVDNKIQVSDAEVDAYMAEHSGTNANAPQELNLGQILIRVPENATPQ 219 Query: 221 QVAARRQRAEEVLRQLKTGADFAKTAATYSDSSDALSGGDLGWRAQDRLPQLFLDAVASL 280 Q+A R+RAEEVL QL G DFAK AA YSD +D L+GG+LGWR QDRLPQLF+DA ASL Sbjct: 220 QLADSRKRAEEVLAQLNAGGDFAKLAAAYSDGTDGLTGGELGWRTQDRLPQLFVDATASL 279 Query: 281 KPGEVSSIVKSGNGFHILKLIDRRNASA------TGKAGAPAVEQTHARHILIKVNQVVS 334 + G+++ +VKSGNGFHILK++ +R S A A V+QTHA HILIKVNQVVS Sbjct: 280 QQGQIAPLVKSGNGFHILKVLGKRTQSVLRAAPGANPAAANTVKQTHASHILIKVNQVVS 339 Query: 335 AAEARRKLLELKERLDHKAATFEELAKLYSNDLSASKGGDLGWIYPGDTVPEFERAMNEL 394 AA+ARRKL ELK+RLD+KAATFEELA+L+SND SASKGGDLGWIYPGDTVPEFERAM+ L Sbjct: 340 AADARRKLTELKQRLDNKAATFEELARLHSNDFSASKGGDLGWIYPGDTVPEFERAMDAL 399 Query: 395 KPGEVSQPIESPFGFHLIQVVERKTDDGSQERARLAARQAIRERKIDEATEDWLRQLRDR 454 GEVS+PIESPFG+HLI V ERK+DD SQER RL RQA+R +K++EAT+DWLRQ+RDR Sbjct: 400 PVGEVSEPIESPFGYHLILVKERKSDDVSQERQRLVVRQALRAQKVEEATQDWLRQVRDR 459 Query: 455 AYVEFRTDD 463 AYVE+R ++ Sbjct: 460 AYVEYRLEE 468 >ref|YP_004754272.1| Survival protein surA (peptidyl-prolyl cis-trans isomerase surA) [Collimonas fungivorans Ter331] gb|AEK63449.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans isomerase surA) [Collimonas fungivorans Ter331] Length = 483 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 282/482 (58%), Positives = 357/482 (74%), Gaps = 19/482 (3%) Query: 1 MNASISSRR-HPLARITSGIVLMCMSFGMIG-SAQAQFAATATPAVPGLQLPPTATPAPA 58 MN S S P+ R T+ I L M+F ++ +A +A A+ A A Sbjct: 1 MNPSFSLMNVFPIMRKTNQIQLAAMAFSLLSVTAGGAWAQAASTAQTAPPAVAPTAAPAA 60 Query: 59 PAAATSRAPRPVDSILVVVNNDVITRQELSERLASVQKRLTAQGVALPPRNQLQSQLLER 118 AA P+ VD+I+ VVN DVIT+QEL++R++ V +R+ AQ + LPP +LQ QLLER Sbjct: 61 KPAAAKANPQTVDAIVAVVNTDVITQQELAKRMSDVTQRMRAQNIELPPVAELQKQLLER 120 Query: 119 MIVERAXDH---------------PAILRIAEQNKMSLADFRVQLEREGMAYPAFREDIR 163 MI+ERA AI RIAEQNK+S+ DF+ QL ++ + Y +FRE+IR Sbjct: 121 MILERAEVQLAKENGLSVDDVMLDRAISRIAEQNKLSMGDFQKQLAQDKIPYASFREEIR 180 Query: 164 REIIMQRLREREVDNKVLVSESEVDNYLAAENNTSVKHEDLNLAQILVRVPENASPEQVA 223 +E+++QRLREREVDNK+ +SESEVDNY+AAEN ++L+LAQILVRVPENAS EQ+A Sbjct: 181 QEMLLQRLREREVDNKIQISESEVDNYIAAENANKQTAQELDLAQILVRVPENASAEQIA 240 Query: 224 ARRQRAEEVLRQLKTGADFAKTAATYSDSSDALSGGDLGWRAQDRLPQLFLDAVASLKPG 283 R +RAEE ++Q+K+G +FA AA YSD+SDAL+GGD+GWRAQDRLP LF++AVA+L PG Sbjct: 241 QRAKRAEEAMQQIKSGGNFAAVAAAYSDASDALTGGDMGWRAQDRLPALFVEAVANLNPG 300 Query: 284 EVSSIVKSGNGFHILKLIDRRNASATGKAGAPA--VEQTHARHILIKVNQVVSAAEARRK 341 +VSSI+KS NGFHI+KL+++R A+A A V+QTH RHILIKV V+A EARR+ Sbjct: 301 QVSSILKSANGFHIIKLVNKRAAAAAAATDTAAAPVQQTHVRHILIKVTPTVTATEARRR 360 Query: 342 LLELKERLDHKAATFEELAKLYSNDLSASKGGDLGWIYPGDTVPEFERAMNELKPGEVSQ 401 L +LKER+D+K ATFE+LAKLYSNDLSASKGGDLGW+YPGDTVPEFERAM+ LKPG++S Sbjct: 361 LADLKERIDNKVATFEDLAKLYSNDLSASKGGDLGWVYPGDTVPEFERAMDALKPGQISD 420 Query: 402 PIESPFGFHLIQVVERKTDDGSQERARLAARQAIRERKIDEATEDWLRQLRDRAYVEFRT 461 PIESPFG+HLIQVVERK +D S+ER RL AR AIRERK +EAT DWLRQLRDR YVE+R Sbjct: 421 PIESPFGYHLIQVVERKANDVSKERQRLTARLAIRERKTEEATNDWLRQLRDRTYVEYRG 480 Query: 462 DD 463 DD Sbjct: 481 DD 482 >ref|YP_001352108.1| peptidyl-prolyl cis-trans isomerase SurA [Janthinobacterium sp. Marseille] gb|ABR90526.1| peptidyl-prolyl cis-trans isomerase SurA [Janthinobacterium sp. Marseille] Length = 469 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 269/448 (60%), Positives = 333/448 (74%), Gaps = 26/448 (5%) Query: 43 AVPGLQLPPTATPAPAPAAATSRAPRPVDSILVVVNNDVITRQELSERLASVQKRLTAQG 102 A+ GL A A + PR D+I+VVVNN+VITR + ER ++ RL +QG Sbjct: 22 ALLGLTCGVMAHVQAQGQTAAAVQPRLADAIIVVVNNEVITRYDFLERYKMIEARLQSQG 81 Query: 103 VALPPRNQLQSQLLERMIVERAXDHPA---------------ILRIAEQNKMSLADFRVQ 147 LPPR QLQ QLLERMIVERA A + RIAEQNK+S+ +FR + Sbjct: 82 GNLPPREQLQRQLLERMIVERAQLQQAKETGIKIDDTMLDRAMGRIAEQNKLSMPEFRKR 141 Query: 148 LEREGMAYPAFREDIRREIIMQRLREREVDNKVLVSESEVDNYLAAENNTSVKH-EDLNL 206 LE +G+ Y FR +IR E+ +QRLREREVDNKV VS+ E+D Y+AA N + ++L++ Sbjct: 142 LEEDGLVYSKFRNEIRDEMAIQRLREREVDNKVQVSDVEIDAYMAAHNAPAATAPQELHI 201 Query: 207 AQILVRVPENASPEQVAARRQRAEEVLRQLKTGADFAKTAATYSDSSDALSGGDLGWRAQ 266 AQIL+RVPENA+ +Q+A ++RA+EV+ QL GADFAK A+ YSD +D L+GG+LGWR+ Sbjct: 202 AQILIRVPENATQKQLADSKRRADEVVAQLAAGADFAKLASAYSDGTDGLTGGELGWRSA 261 Query: 267 DRLPQLFLDAVASLKPGEVSSIVKSGNGFHILKLIDRRNASA----------TGKAGAPA 316 +RLPQLF+DA A+L+ G+++ IVKSGNGFHILKL+ RR S T A A Sbjct: 262 ERLPQLFVDATANLQDGQIAPIVKSGNGFHILKLLGRRTQSVLRADGGASGATAAAAPAA 321 Query: 317 VEQTHARHILIKVNQVVSAAEARRKLLELKERLDHKAATFEELAKLYSNDLSASKGGDLG 376 V+QTHA HILIKVNQVVSAAEARRKLLELK+RLD+KAATFEELAKLYSND SA+KGGDLG Sbjct: 322 VKQTHASHILIKVNQVVSAAEARRKLLELKQRLDNKAATFEELAKLYSNDFSAAKGGDLG 381 Query: 377 WIYPGDTVPEFERAMNELKPGEVSQPIESPFGFHLIQVVERKTDDGSQERARLAARQAIR 436 WIYPGDTVPEFERAM+ L G+VS+PIESPFG+HLI V ERK+DD SQER R+ ARQAIR Sbjct: 382 WIYPGDTVPEFERAMDALPIGQVSEPIESPFGYHLILVTERKSDDVSQERQRMIARQAIR 441 Query: 437 ERKIDEATEDWLRQLRDRAYVEFRTDDN 464 E+K++EAT+DWLRQ+RDRAYVE+R DD Sbjct: 442 EQKVEEATQDWLRQVRDRAYVEYRMDDQ 469