BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0054.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFW86684.1| XRE family transcriptional regulator [Pseudomonas...    71   5e-11
gb|EGH15294.1| XRE family transcriptional regulator [Pseudomonas...    71   5e-11
gb|EFW78487.1| XRE family transcriptional regulator [Pseudomonas...    71   6e-11

>gb|EFW86684.1| XRE family transcriptional regulator [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 119

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 14/129 (10%)

Query: 1   MNIGQVLRKIRKERKASLEEIALVAGTDAANLSRVERDKQRLTPDMLENVAKALDVPVSS 60
           MNIG  +RK+R E+  +LE +AL AGT A NLS+VER +Q  + D+L  +++AL    S 
Sbjct: 1   MNIGAAIRKVRLEKGLTLEAVALDAGTYAGNLSKVERAQQLPSLDLLHKLSEALGTKTSE 60

Query: 61  LYFIAEQNMQSGKTVSDAGKAAAARLENALGRFILLAPRNTSTTGYYSXLLAPQDQQLAA 120
           LY +AE         SD    AA+      G  ++L  R+          L P++++LA 
Sbjct: 61  LYAVAESG-------SDNSSGAASEPSPEQGNEVILVRRHFQA-------LTPRNRKLAI 106

Query: 121 DFMELLLKS 129
           +F++LL +S
Sbjct: 107 EFLKLLGQS 115


>gb|EGH15294.1| XRE family transcriptional regulator [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 125

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 14/129 (10%)

Query: 1   MNIGQVLRKIRKERKASLEEIALVAGTDAANLSRVERDKQRLTPDMLENVAKALDVPVSS 60
           MNIG  +RK+R E+  +LE +AL AGT A NLS+VER +Q  + D+L  +++AL    S 
Sbjct: 7   MNIGAAIRKVRLEKGLTLEAVALDAGTYAGNLSKVERAQQLPSLDLLHKLSEALGTKTSE 66

Query: 61  LYFIAEQNMQSGKTVSDAGKAAAARLENALGRFILLAPRNTSTTGYYSXLLAPQDQQLAA 120
           LY +AE    SG   SD    AA+      G  ++L  R+          L P++++LA 
Sbjct: 67  LYAVAE----SG---SDNSSGAASEPSPEQGNEVILVRRHFQA-------LTPRNRKLAI 112

Query: 121 DFMELLLKS 129
           +F++LL +S
Sbjct: 113 EFLKLLGQS 121


>gb|EFW78487.1| XRE family transcriptional regulator [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 139

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 14/129 (10%)

Query: 1   MNIGQVLRKIRKERKASLEEIALVAGTDAANLSRVERDKQRLTPDMLENVAKALDVPVSS 60
           MNIG  +RK+R E+  +LE +AL AGT A NLS+VER +Q  + D+L  +++AL    S 
Sbjct: 21  MNIGAAIRKVRLEKGLTLEAVALDAGTYAGNLSKVERAQQLPSLDLLHKLSEALGTKTSE 80

Query: 61  LYFIAEQNMQSGKTVSDAGKAAAARLENALGRFILLAPRNTSTTGYYSXLLAPQDQQLAA 120
           LY +AE    SG   SD    AA+      G  ++L  R+          L P++++LA 
Sbjct: 81  LYAVAE----SG---SDNSSGAASEPSPEQGNEVILVRRHFQA-------LTPRNRKLAI 126

Query: 121 DFMELLLKS 129
           +F++LL +S
Sbjct: 127 EFLKLLGQS 135