BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0042.p (205 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754258.1| thiosulfate reductase cytochrome B subunit (... 311 5e-83 ref|YP_001896286.1| transmembrane hydrogenase cytochrome b-type ... 289 2e-76 ref|ZP_03265483.1| cytochrome b561 [Burkholderia sp. H160] >gi|2... 287 6e-76 ref|YP_003605531.1| transmembrane hydrogenase cytochrome b-type ... 287 7e-76 ref|YP_003906364.1| putative transmembrane hydrogenase cytochrom... 280 8e-74 >ref|YP_004754258.1| thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Collimonas fungivorans Ter331] gb|AEK63435.1| Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Collimonas fungivorans Ter331] Length = 221 Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 149/192 (77%), Positives = 169/192 (88%) Query: 14 IIHPLWLRVTHWTNALAVVLMILSGWRIYNASPIFPFAFPKAWTLGGWLGGALQWHFAAM 73 ++HP+WLRVTHW NALAV++MILSGWRIYNASPIFPF P WTLGGWLGGALQWHFAAM Sbjct: 30 VVHPIWLRVTHWLNALAVIIMILSGWRIYNASPIFPFRIPSEWTLGGWLGGALQWHFAAM 89 Query: 74 WLLAINGVIYLALNLLSGRARRKFFPLRPLEVFQDFVQALKGKLQHASLDHYNAVQKLAY 133 WLL NG++YL LN SGR +KF PLRP EV QDFV+AL+GKLQH +LDHYNAVQKLAY Sbjct: 90 WLLFFNGLVYLLLNTGSGRLWKKFLPLRPTEVVQDFVKALRGKLQHDALDHYNAVQKLAY 149 Query: 134 LSVIADLVLIVVSGLAIWKSVQLPLLRDLMGGYDNARIVHFFAMSFLVLFIAVHVAMVAL 193 +S I DL+L+VVSGLAIWKSVQ P+LR+LMGG+DNAR+VHF AM+FLV FI VH+ MVAL Sbjct: 150 VSAILDLILLVVSGLAIWKSVQFPVLRELMGGFDNARVVHFCAMAFLVAFIVVHIIMVAL 209 Query: 194 VPRTLLAMLRGR 205 VPRTLLAMLRGR Sbjct: 210 VPRTLLAMLRGR 221 >ref|YP_001896286.1| transmembrane hydrogenase cytochrome b-type subunit [Burkholderia phytofirmans PsJN] gb|ACD17062.1| putative transmembrane hydrogenase cytochrome b-type subunit [Burkholderia phytofirmans PsJN] Length = 213 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 145/198 (73%), Positives = 163/198 (82%), Gaps = 1/198 (0%) Query: 9 PTTSAIIHPLWLRVTHWTNALAVVLMILSGWRIYNASPIFP-FAFPKAWTLGGWLGGALQ 67 P S IHPLW+R+THW NALA +LM+LSGWRIY+ASPIFP F FP A TLGGWLGGALQ Sbjct: 16 PKKSGAIHPLWVRLTHWLNALAAILMMLSGWRIYDASPIFPAFHFPPAITLGGWLGGALQ 75 Query: 68 WHFAAMWLLAINGVIYLALNLLSGRARRKFFPLRPLEVFQDFVQALKGKLQHASLDHYNA 127 WHFAAMWLL NG++YLALNL SGR RKF P+ P V +DFV AL GKL HA L YNA Sbjct: 76 WHFAAMWLLVFNGLLYLALNLASGRFVRKFLPVSPRAVLRDFVAALTGKLSHADLRVYNA 135 Query: 128 VQKLAYLSVIADLVLIVVSGLAIWKSVQLPLLRDLMGGYDNARIVHFFAMSFLVLFIAVH 187 VQK AYL V+ DL+++V+SGLAIWKSVQ PLLR+LMGGYDNARIVHF AMS + FIAVH Sbjct: 136 VQKFAYLFVVCDLIVLVLSGLAIWKSVQFPLLRELMGGYDNARIVHFCAMSLMAAFIAVH 195 Query: 188 VAMVALVPRTLLAMLRGR 205 + MVALVPR+LLAMLRGR Sbjct: 196 LVMVALVPRSLLAMLRGR 213 >ref|ZP_03265483.1| cytochrome b561 [Burkholderia sp. H160] gb|EEA02908.1| cytochrome b561 [Burkholderia sp. H160] Length = 211 Score = 287 bits (735), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 144/202 (71%), Positives = 166/202 (82%), Gaps = 2/202 (0%) Query: 5 APILPTTSAIIHPLWLRVTHWTNALAVVLMILSGWRIYNASPIFP-FAFPKAWTLGGWLG 63 AP P +IHPLWLR+THW NALA ++M+LSGWRIY+ASPIFP F+FP A TLGGWLG Sbjct: 11 APAAPK-RGVIHPLWLRITHWLNALAAIVMMLSGWRIYDASPIFPAFSFPTAITLGGWLG 69 Query: 64 GALQWHFAAMWLLAINGVIYLALNLLSGRARRKFFPLRPLEVFQDFVQALKGKLQHASLD 123 GALQWHFAAMWLL NG++YL+LNL SGR RKF PL P V +DFV AL+GKL+H L Sbjct: 70 GALQWHFAAMWLLVFNGLVYLSLNLASGRFLRKFLPLTPRAVLRDFVTALRGKLKHDDLR 129 Query: 124 HYNAVQKLAYLSVIADLVLIVVSGLAIWKSVQLPLLRDLMGGYDNARIVHFFAMSFLVLF 183 YNAVQK AYL VI DL+++V+SGLAIWKS Q PLLR+LMGGYDNAR+VHF AMS L F Sbjct: 130 VYNAVQKFAYLFVIVDLIVLVLSGLAIWKSAQFPLLRELMGGYDNARVVHFSAMSLLAAF 189 Query: 184 IAVHVAMVALVPRTLLAMLRGR 205 +AVH+AMV LVPR+LLAMLRGR Sbjct: 190 LAVHLAMVGLVPRSLLAMLRGR 211 >ref|YP_003605531.1| transmembrane hydrogenase cytochrome b-type subunit [Burkholderia sp. CCGE1002] gb|ADG16020.1| putative transmembrane hydrogenase cytochrome b-type subunit [Burkholderia sp. CCGE1002] Length = 216 Score = 287 bits (734), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 141/193 (73%), Positives = 163/193 (84%), Gaps = 1/193 (0%) Query: 14 IIHPLWLRVTHWTNALAVVLMILSGWRIYNASPIFP-FAFPKAWTLGGWLGGALQWHFAA 72 +IHPLWLR+THW NA A ++M+LSGWRIY+ASPIFP F+FP A TLGGWLGGALQWHFAA Sbjct: 24 VIHPLWLRITHWLNAFAAIVMMLSGWRIYDASPIFPAFSFPTAITLGGWLGGALQWHFAA 83 Query: 73 MWLLAINGVIYLALNLLSGRARRKFFPLRPLEVFQDFVQALKGKLQHASLDHYNAVQKLA 132 MWLL NG++Y+ALNL SGR RKF PL P V +DF+ AL+GKL H L YNAVQK A Sbjct: 84 MWLLVFNGLVYIALNLASGRFVRKFLPLTPRAVLRDFIAALRGKLSHDDLRVYNAVQKFA 143 Query: 133 YLSVIADLVLIVVSGLAIWKSVQLPLLRDLMGGYDNARIVHFFAMSFLVLFIAVHVAMVA 192 YL IADL+++V+SGLAIWKSVQ PLLR+LMGGYDNAR+VHF AMS L F+AVH+AMVA Sbjct: 144 YLFAIADLIVLVLSGLAIWKSVQFPLLRELMGGYDNARVVHFTAMSLLAAFLAVHLAMVA 203 Query: 193 LVPRTLLAMLRGR 205 LVPR+LLAMLRGR Sbjct: 204 LVPRSLLAMLRGR 216 >ref|YP_003906364.1| putative transmembrane hydrogenase cytochrome b-type subunit [Burkholderia sp. CCGE1003] gb|ADN57073.1| putative transmembrane hydrogenase cytochrome b-type subunit [Burkholderia sp. CCGE1003] Length = 212 Score = 280 bits (716), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 139/195 (71%), Positives = 162/195 (83%), Gaps = 1/195 (0%) Query: 12 SAIIHPLWLRVTHWTNALAVVLMILSGWRIYNASPIF-PFAFPKAWTLGGWLGGALQWHF 70 S IHP W+R+THW NALA +LM+LSGWRIY+ASP+F F+FP TLGGWLGGALQWHF Sbjct: 18 SGAIHPRWVRITHWLNALAAILMMLSGWRIYDASPVFASFSFPTQITLGGWLGGALQWHF 77 Query: 71 AAMWLLAINGVIYLALNLLSGRARRKFFPLRPLEVFQDFVQALKGKLQHASLDHYNAVQK 130 AAMWLL NG+IY+ALNL+SGR RKF PL P V++DFV AL GKL HA L YNAVQK Sbjct: 78 AAMWLLVANGLIYIALNLVSGRFARKFLPLTPRAVWRDFVAALTGKLSHADLRVYNAVQK 137 Query: 131 LAYLSVIADLVLIVVSGLAIWKSVQLPLLRDLMGGYDNARIVHFFAMSFLVLFIAVHVAM 190 AYL V+ DL+++V+SGLAIWKSVQ PLLR+LMGGYDNAR+VHF AM+ + FI VH+AM Sbjct: 138 FAYLFVVFDLIVLVLSGLAIWKSVQFPLLRELMGGYDNARVVHFCAMALMAAFIVVHLAM 197 Query: 191 VALVPRTLLAMLRGR 205 VALVPR+LLAMLRGR Sbjct: 198 VALVPRSLLAMLRGR 212