BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0036.p         (176 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774152.1| nicotinamidase-like protein [Herbaspirillum ...   194   4e-48
ref|YP_004686186.1| nicotinamidase isochorismatase family [Cupri...   194   6e-48
ref|YP_726952.1| amidase [Ralstonia eutropha H16] >gi|113527239|...   192   1e-47
ref|YP_002006003.1| isochorismatase hydrolase [Cupriavidus taiwa...   186   1e-45
ref|YP_296123.1| isochorismatase hydrolase [Ralstonia eutropha J...   177   8e-43

>ref|YP_003774152.1| nicotinamidase-like protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ62244.1| nicotinamidase-like protein [Herbaspirillum seropedicae SmR1]
          Length = 202

 Score =  194 bits (494), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/199 (57%), Positives = 127/199 (63%), Gaps = 36/199 (18%)

Query: 13  MSIPKTLLQIAGAAPRXARAR------------------------------------ARA 36
           MS P+TL+QIAG +PR A  +                                    ARA
Sbjct: 1   MSTPQTLIQIAGGSPRAATWQEAALVIIDHQTEYTTGRAPLAGIGAAVAEVALLLEHARA 60

Query: 37  AGAPVFHVVHHAKPGAVLFDPQREFVGIIDGLQPQDGEVTVVKALPNSFAGTTLDAELKK 96
           A APV HVVHH KPG  +FDPQ   V IIDG+QPQ GE  + K LPNSFAGTTLD  LKK
Sbjct: 61  AAAPVIHVVHHGKPGGAMFDPQGPHVAIIDGVQPQPGEAVITKGLPNSFAGTTLDETLKK 120

Query: 97  AGKKELIIAGFATHMCISATTRSALDHGYASTVVAAACATRDLPDALGKGVVPAAEVQRA 156
            G+K LIIAGFATHMC+SAT RSALDHGYA TVVAAACATRDLPD LG   + AAE+QR 
Sbjct: 121 TGRKSLIIAGFATHMCVSATVRSALDHGYACTVVAAACATRDLPDPLGGPALSAAEIQRV 180

Query: 157 ALAALADRFATVVPDAAAL 175
           ALA LADR+ATVV  A  L
Sbjct: 181 ALAELADRYATVVAHAGLL 199


>ref|YP_004686186.1| nicotinamidase isochorismatase family [Cupriavidus necator N-1]
 gb|AEI77705.1| nicotinamidase isochorismatase family [Cupriavidus necator N-1]
          Length = 201

 Score =  194 bits (492), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 109/142 (76%)

Query: 35  RAAGAPVFHVVHHAKPGAVLFDPQREFVGIIDGLQPQDGEVTVVKALPNSFAGTTLDAEL 94
           R+ G PV HV HH +PG++ FDP   +   I+G+ PQ GE+TV K LPNSFAGTTL  EL
Sbjct: 59  RSHGTPVIHVAHHGRPGSMAFDPTGPYAAFIEGVGPQAGEITVTKGLPNSFAGTTLADEL 118

Query: 95  KKAGKKELIIAGFATHMCISATTRSALDHGYASTVVAAACATRDLPDALGKGVVPAAEVQ 154
            + G+KELI+AGF THMC+SAT RSALDHGY STVVAAACATRDLPD LG   VPAA++ 
Sbjct: 119 ARLGRKELIVAGFQTHMCVSATVRSALDHGYRSTVVAAACATRDLPDPLGGPAVPAADLH 178

Query: 155 RAALAALADRFATVVPDAAALN 176
           R+ LAAL DRFATVV DA A +
Sbjct: 179 RSTLAALNDRFATVVADAGAWH 200


>ref|YP_726952.1| amidase [Ralstonia eutropha H16]
 emb|CAJ93584.1| amidase related to nicotinamidase,Isochorismatase family [Ralstonia
           eutropha H16]
          Length = 201

 Score =  192 bits (488), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 108/142 (76%)

Query: 35  RAAGAPVFHVVHHAKPGAVLFDPQREFVGIIDGLQPQDGEVTVVKALPNSFAGTTLDAEL 94
           R  G PV HV HH +PG++ FDP   +   I+G+ PQ GE+TV K LPNSFAGTTL  EL
Sbjct: 59  RRHGTPVIHVAHHGRPGSMAFDPTGPYAAFIEGVGPQAGEITVTKGLPNSFAGTTLADEL 118

Query: 95  KKAGKKELIIAGFATHMCISATTRSALDHGYASTVVAAACATRDLPDALGKGVVPAAEVQ 154
            + G+KELI+AGF THMC+SAT RSALDHGY STVVAAACATRDLPD LG   VPAA++ 
Sbjct: 119 ARLGRKELIVAGFQTHMCVSATVRSALDHGYRSTVVAAACATRDLPDPLGGPAVPAADLH 178

Query: 155 RAALAALADRFATVVPDAAALN 176
           R+ LAAL DRFATVV DA A +
Sbjct: 179 RSTLAALNDRFATVVADAGAWH 200


>ref|YP_002006003.1| isochorismatase hydrolase [Cupriavidus taiwanensis LMG 19424]
 emb|CAQ69940.1| putative isochorismatase hydrolase family protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 201

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/138 (64%), Positives = 105/138 (76%)

Query: 38  GAPVFHVVHHAKPGAVLFDPQREFVGIIDGLQPQDGEVTVVKALPNSFAGTTLDAELKKA 97
           G PV HV HH +PG++ FDP   +   I+G+ P  GE+TV K LPNSFAGTTL  EL + 
Sbjct: 62  GTPVIHVAHHGRPGSLAFDPTGPYAAFIEGVGPDGGEITVTKGLPNSFAGTTLADELSRL 121

Query: 98  GKKELIIAGFATHMCISATTRSALDHGYASTVVAAACATRDLPDALGKGVVPAAEVQRAA 157
           G+KELI+AGF THMC+SAT R+ALDHG+ STVVAAACATRDLPD LG   VPAA++ R+ 
Sbjct: 122 GRKELIVAGFQTHMCVSATVRAALDHGFRSTVVAAACATRDLPDPLGGPAVPAADLHRST 181

Query: 158 LAALADRFATVVPDAAAL 175
           LAAL DRFATVV DA A 
Sbjct: 182 LAALNDRFATVVADAGAW 199


>ref|YP_296123.1| isochorismatase hydrolase [Ralstonia eutropha JMP134]
 gb|AAZ61279.1| Isochorismatase hydrolase [Ralstonia eutropha JMP134]
          Length = 203

 Score =  177 bits (448), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 101/142 (71%)

Query: 35  RAAGAPVFHVVHHAKPGAVLFDPQREFVGIIDGLQPQDGEVTVVKALPNSFAGTTLDAEL 94
           R  G PV HV+HH K     FDP+  +V  I+GL PQ GE TV K LPNSFAGT L A+L
Sbjct: 61  RQHGTPVIHVMHHGKGKGGAFDPEGPYVAFIEGLTPQAGEQTVAKHLPNSFAGTDLAAKL 120

Query: 95  KKAGKKELIIAGFATHMCISATTRSALDHGYASTVVAAACATRDLPDALGKGVVPAAEVQ 154
              G+KELI+AGF THMCISAT RSALDHGY  T+VA ACATRDLPD LG   + AAE+Q
Sbjct: 121 AALGRKELIVAGFQTHMCISATVRSALDHGYRVTLVANACATRDLPDPLGGAPLSAAELQ 180

Query: 155 RAALAALADRFATVVPDAAALN 176
           R  LAAL DRFATVV DA+   
Sbjct: 181 RVTLAALHDRFATVVSDASVWK 202