BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0028.p (522 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05926889.1| hypothetical protein VCJ_002880 [Vibrio sp. R... 402 e-110 ref|ZP_04752974.1| hypothetical protein AM305_06941 [Actinobacil... 391 e-106 ref|ZP_05876363.1| hypothetical protein VFA_000477 [Vibrio furni... 376 e-102 gb|EGT76955.1| Hypothetical protein GGA_0719 [Haemophilus haemol... 351 2e-94 ref|YP_002721062.1| hypothetical protein BHWA1_00865 [Brachyspir... 275 1e-71 >ref|ZP_05926889.1| hypothetical protein VCJ_002880 [Vibrio sp. RC341] gb|EEX64347.1| hypothetical protein VCJ_002880 [Vibrio sp. RC341] Length = 511 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/499 (45%), Positives = 314/499 (62%), Gaps = 12/499 (2%) Query: 32 LSTSETVSRFGDASAEFVKALRGVDNAAKEPIHFAKSHAGIFKNKINAQYAEQNIKQQAG 91 LS +ETV G A+AEF+K LRG+D + + F +S + ++K+N ++AEQN+KQQAG Sbjct: 17 LSVNETVKLHGSANAEFLKGLRGID--YESGVVFDRSLLKVSQSKVNTEFAEQNLKQQAG 74 Query: 92 YSAEVAATAKDNSEFIISGSKVRASRSDDLEQFGKNHPVVDRVRILDGEIIDGSQSQMKF 151 YSAE+A+ ++ N++ I+ G R SRS+DL FGKN VVD V I+DG + +++QMKF Sbjct: 75 YSAEIASVSRKNAQSILDGDTKRYSRSEDLASFGKNDTVVDIVEIVDGAVT--AEAQMKF 132 Query: 152 VGDRS--KLFNDIAKPDGK-----FCRYRGA-KLELPSEQYKDAAQFCRDKAATLRKNAA 203 VGD + L N IA K RY +L+LPS+Q A + C+ +AA+LR+ A Sbjct: 133 VGDNNLDSLLNKIADGQNKSGKNDLSRYMQVDELQLPSDQVDKAKEICQKRAASLREQAK 192 Query: 204 SAQAKGNAEAAARLEETARNYDQLADNVVDSGLTTEQAIFYRLHPELATALDIAKNSHQA 263 + G E A + E+ A NY +L V DSGLTT++A+ YRL PE T DIA+ SH+A Sbjct: 193 RLREDGKTELATQKEQLADNYCELEQKVSDSGLTTKEAMDYRLEPEKMTVKDIARTSHKA 252 Query: 264 GMEGAKYGAIIGACISVVQNGYQFAQGDADAADAIIAVAGDTAKAAAIGYATAATGSAIK 323 G+EGAK+GA IG IS+V N + GD + ++A I VA DT +A +GYA+A +GS IK Sbjct: 253 GLEGAKFGAAIGGSISLVTNLIAASSGDKELSEAAIDVAVDTTVSAGVGYASAFSGSVIK 312 Query: 324 SVMQQSGNQAMRNLAGTSAPALALSACIALGSSIKRYVKGEIDEAQFLMEIGEKGSGMLA 383 VMQQS ++ R L+ T+ PALA+S CIA SSI Y GEI E + L IG SGML+ Sbjct: 313 GVMQQSSSEYTRVLSSTALPALAVSVCIACASSISSYASGEIGEVELLQNIGGTASGMLS 372 Query: 384 TGMMGMVGQIAIPIPFVGAAIGGMIGCTLSNLFYQSAVDAAREAQASRELLARTRIIEQA 443 + M VGQI IP+P +G +GGMIG TLSNLFYQ + + EA+ SRE L A Sbjct: 373 SSMFSAVGQIVIPVPVLGGLVGGMIGYTLSNLFYQGFLSSMEEAKRSREQLTFIESKCLA 432 Query: 444 ARQRIAEEQARLDAFTATEIPALQSAVRELSLSLSVVNTDGDEIAISVNRFAALLGKQLE 503 ARQ A Q +LD+ + +I + A +L L+ + + D++ VN FA LLG++L+ Sbjct: 433 ARQMAAAYQQQLDSVFSQKISQVTEAKTQLFSVLNQSDMNVDKLCEEVNSFANLLGQELK 492 Query: 504 FGTKSEFDAFMLSDLPLTL 522 F T++EFD FM SD L L Sbjct: 493 FKTQTEFDDFMSSDDTLKL 511 >ref|ZP_04752974.1| hypothetical protein AM305_06941 [Actinobacillus minor NM305] gb|EER47680.1| hypothetical protein AM305_06941 [Actinobacillus minor NM305] Length = 504 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 223/498 (44%), Positives = 304/498 (61%), Gaps = 11/498 (2%) Query: 31 ALSTSETVSRFGDASAEFVKALRGVDNAAKEPIHFAKSHAGIFKNKINAQYAEQNIKQQA 90 A + E VSR+G A AEF+K LRG+D + I F +S I KIN E+ +KQQA Sbjct: 12 AAGSQELVSRYGSAGAEFLKGLRGID--YETGIKFDRSLTDIGNYKINPNDVEKTVKQQA 69 Query: 91 GYSAEVAATAKDNSEFIISGSKVRASRSDDLEQFGKNHPVVDRVRIL-DGEIIDGSQSQM 149 G+SAEVA ++ N+E II+ + SRS+D+ +FGKNH VVD V I GE I SQM Sbjct: 70 GFSAEVAHVSRKNAEAIINKTGSTFSRSEDIAEFGKNHNVVDIVEITASGEQI---TSQM 126 Query: 150 KFVGDRSKLFNDIAKPDG----KFCRYRGA-KLELPSEQYKDAAQFCRDKAATLRKNAAS 204 KFV D L IA+ +G RY +L+LP+EQ + A ++CR +A LRKNA + Sbjct: 127 KFVTDPESLLRKIAEGNGGGKNDLSRYMNVDRLDLPTEQVEKAKEYCRRRANELRKNAEA 186 Query: 205 AQAKGNAEAAARLEETARNYDQLADNVVDSGLTTEQAIFYRLHPELATALDIAKNSHQAG 264 A G + A +L + A NY++L+ + DSG++TE+AI YRL+P+ TA DIAK SH+AG Sbjct: 187 AAKAGKTDVAEKLNKAADNYEKLSTKISDSGISTEEAIKYRLNPKWETAKDIAKVSHRAG 246 Query: 265 MEGAKYGAIIGACISVVQNGYQFAQGDADAADAIIAVAGDTAKAAAIGYATAATGSAIKS 324 +EGAK+GA IG IS++ N G+ + ADA+ DT K+A +GY TA GSAIK Sbjct: 247 IEGAKFGAAIGGSISLITNMIAVRSGNKEFADALFDTTKDTLKSAGVGYGTAFAGSAIKG 306 Query: 325 VMQQSGNQAMRNLAGTSAPALALSACIALGSSIKRYVKGEIDEAQFLMEIGEKGSGMLAT 384 VMQQS A+RNL+ T PA+ +S CI+ G SIKRY KGEI+E + EIG + L+ Sbjct: 307 VMQQSSKAAIRNLSKTGLPAMIVSTCISTGKSIKRYAKGEINETELFREIGGVVNNTLSI 366 Query: 385 GMMGMVGQIAIPIPFVGAAIGGMIGCTLSNLFYQSAVDAAREAQASRELLARTRIIEQAA 444 M+GQIAIPIP +G+ IGGM+G TL+N FY S +D+ E +AS E + A Sbjct: 367 ATFSMIGQIAIPIPVLGSLIGGMVGYTLTNNFYHSFLDSLDEVKASEERYHYIEMCCLRA 426 Query: 445 RQRIAEEQARLDAFTATEIPALQSAVRELSLSLSVVNTDGDEIAISVNRFAALLGKQLEF 504 R + + LD A ++ L+ +L SL NT+ DE ++N+FA +LGK+L F Sbjct: 427 RATMRGYRYYLDNLFANKLSELRIESEKLFNSLENQNTNIDEFCQNINQFADVLGKKLPF 486 Query: 505 GTKSEFDAFMLSDLPLTL 522 EF+ FMLSD L + Sbjct: 487 NNIDEFNDFMLSDSTLKI 504 >ref|ZP_05876363.1| hypothetical protein VFA_000477 [Vibrio furnissii CIP 102972] gb|EEX42720.1| hypothetical protein VFA_000477 [Vibrio furnissii CIP 102972] Length = 511 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 216/508 (42%), Positives = 315/508 (62%), Gaps = 12/508 (2%) Query: 23 KNVADAGAALSTSETVSRFGDASAEFVKALRGVDNAAKEPIHFAKSHAGIFKNKINAQYA 82 +N + LS +TVS+FG A+AEF+K LRGVD+ + + +S + ++K+N ++ Sbjct: 8 RNQVNTAIGLSNVDTVSKFGSATAEFLKGLRGVDHES--GVFSDRSLIKVSQSKVNCEFV 65 Query: 83 EQNIKQQAGYSAEVAATAKDNSEFIISGSKVRASRSDDLEQFGKNHPVVDRVRILDGEII 142 EQN+KQQAGYSAE+A+T++ N++ II GSK R SRS+D+ FGKN PVVD V +LDG + Sbjct: 66 EQNLKQQAGYSAEIASTSRKNAQSIIEGSKARYSRSEDVPSFGKNDPVVDIVELLDGSV- 124 Query: 143 DGSQSQMKFVGDRS--KLFNDIAKPDGK-----FCRYRGA-KLELPSEQYKDAAQFCRDK 194 S +QMKFVGD L N IA K RY +L+LP+ Q + A CR++ Sbjct: 125 -ESTAQMKFVGDDKLGTLLNKIADGSNKSGKNDLSRYLEVDELQLPTNQVERAKDICRER 183 Query: 195 AATLRKNAASAQAKGNAEAAARLEETARNYDQLADNVVDSGLTTEQAIFYRLHPELATAL 254 A LR+ A + GN + A + E+ A NY++L + DS LT+++A+ YRL P TA Sbjct: 184 ATKLREQANRLRENGNIQLADQKEQVANNYNELEKKISDSKLTSDEAMQYRLEPNKMTAK 243 Query: 255 DIAKNSHQAGMEGAKYGAIIGACISVVQNGYQFAQGDADAADAIIAVAGDTAKAAAIGYA 314 DI + SH+AG+EGAK+G IG IS++ N + G+ + ++A I DT +A +GY Sbjct: 244 DIVRTSHKAGVEGAKFGVAIGGSISLITNLIAVSSGNKELSEAAIDTVIDTTLSAGVGYV 303 Query: 315 TAATGSAIKSVMQQSGNQAMRNLAGTSAPALALSACIALGSSIKRYVKGEIDEAQFLMEI 374 +A +GSA+K ++QQS ++ R L+ T+ PAL +S CIA GSS+ Y G+I+EA+ L I Sbjct: 304 SAFSGSALKGMLQQSSSEYTRALSATALPALVVSVCIACGSSVLSYTSGDIEEAELLQNI 363 Query: 375 GEKGSGMLATGMMGMVGQIAIPIPFVGAAIGGMIGCTLSNLFYQSAVDAAREAQASRELL 434 G GML++ M +GQ+AIPIP +G +GGM+G TLSNLFYQ + + +A+ SRE L Sbjct: 364 GGSVGGMLSSSMFASIGQLAIPIPILGGLVGGMVGYTLSNLFYQGFLSSLDDAKKSREQL 423 Query: 435 ARTRIIEQAARQRIAEEQARLDAFTATEIPALQSAVRELSLSLSVVNTDGDEIAISVNRF 494 R AA+Q + Q RLD + +I L A +L +L+ N +++ +N F Sbjct: 424 ELIRNKCLAAKQMVGVYQNRLDEIFSKKISQLNDAKEQLFSALNQPNVSVNQLCNDINLF 483 Query: 495 AALLGKQLEFGTKSEFDAFMLSDLPLTL 522 A LL K+L+F T++EFD FM D L L Sbjct: 484 ALLLEKELQFQTQAEFDDFMSGDDTLEL 511 >gb|EGT76955.1| Hypothetical protein GGA_0719 [Haemophilus haemolyticus M21127] Length = 504 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 205/510 (40%), Positives = 297/510 (58%), Gaps = 23/510 (4%) Query: 24 NVADAGAALSTSETVSRFGDASAEFVKALRGVDNAAKEPIHFAKSHAGIFKNKINAQYA- 82 N+ + A E V+R+G A AEF+K RG+D I + K G+ K +QY Sbjct: 7 NLKNFAIASGLQEIVNRYGSAGAEFIKGYRGID----YEIPYNKIERGL---KQISQYKI 59 Query: 83 --EQNIKQQAGYSAEVAATAKDNSEFIISGSKVRASRSDDLEQFGKNHPVVDRVRILDGE 140 E ++KQ AG++AEVA ++ N++ II+ S R SRS+DLE FGKN+P+VD V DG Sbjct: 60 GNENSVKQHAGFAAEVAKVSRGNAKNIINKSNTRFSRSEDLEGFGKNNPIVDIVEYSDGR 119 Query: 141 IIDGSQSQMKFVGDRSKLFNDIAK-PDGK---FCRYRGA-KLELPSEQYKDAAQFCRDKA 195 II SQSQMKFV + L +IA+ +G+ RY KLELP+EQ ++A +CR +A Sbjct: 120 II--SQSQMKFVNNPKTLLRNIAEGENGRSKDLSRYLANDKLELPTEQVEEAKVYCRKRA 177 Query: 196 ATLRKNAASAQAKGNAEAAARLEETARNYDQLADNVVDSGLTTEQAIFYRLHPELATALD 255 +NA + KG E A R + A+NY++L + D+G+T EQA Y +P+ T D Sbjct: 178 KEFLENADVVEKKGKHELAQRYRKQAKNYEKLETQISDAGMTREQAENYFKNPKWETTKD 237 Query: 256 IAKNSHQAGMEGAKYGAIIGACISVVQNGYQFAQGDADAADAIIAVAGDTAKAAAIGYAT 315 IA SH+AG+EGAK+GA IG IS++ N D D + A++ A DT +A +GY T Sbjct: 238 IANVSHKAGIEGAKFGAAIGGSISLITNAIAVYSNDKDFSKALLDTATDTLTSAGVGYLT 297 Query: 316 AATGSAIKSVMQQSGNQAMRNLAGTSAPALALSACIALGSSIKRYVKGEIDEAQFLMEIG 375 + TGS IK ++QQS +Q MRNL+ + P + +S C+A S+ +Y G+I+ + EIG Sbjct: 298 SFTGSTIKGILQQSSSQVMRNLSKSGLPTMVVSTCLAASKSLYQYSSGKIELEECFTEIG 357 Query: 376 EKGSGMLATGMMGMVGQIAIPIPFVGAAIGGMIGCTLSNLFYQSAVDAAREAQASRELLA 435 +GML++ M+GQIAIPIP +G IGGM+G TL+N FY +++ E ++ A Sbjct: 358 ATLNGMLSSATFSMLGQIAIPIPVIGGLIGGMVGHTLTNSFYHELINSRYEVNLTK---A 414 Query: 436 RTRIIEQ--AARQRIAEE-QARLDAFTATEIPALQSAVRELSLSLSVVNTDGDEIAISVN 492 R IIE AA + +AE+ Q + ++ L + + +L+ DE +N Sbjct: 415 RREIIEMQCAAVKELAEKYQKNISKLFTKKLIQLDEETKSVFAALNNPMISADEFGKKMN 474 Query: 493 RFAALLGKQLEFGTKSEFDAFMLSDLPLTL 522 +FA LLGK L + TK EFD+ MLS L L Sbjct: 475 KFAELLGKDLPYKTKEEFDSAMLSTKTLIL 504 >ref|YP_002721062.1| hypothetical protein BHWA1_00865 [Brachyspira hyodysenteriae WA1] gb|ACN83358.1| hypothetical protein BHWA1_00865 [Brachyspira hyodysenteriae WA1] Length = 517 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 185/510 (36%), Positives = 280/510 (54%), Gaps = 22/510 (4%) Query: 22 FKNVADAGAALSTSETVSRFGDASAEFVKALRGVDNAAKEPIHFAKSHAGIFKNKINAQY 81 F NV AA SE V R+G A E A GVDN A + K I + K+N + Sbjct: 21 FDNVILGNAA---SEVVDRYGSAVKEHFVAYSGVDNEAGK--QLTKGLKDISQYKVNPEN 75 Query: 82 AEQNIKQQAGYSAEVAATAKDNSEFIISGSKVRASRSDDLEQFGKNHPVVDRVRILD-GE 140 N+KQQAG+SAEV A+ N+E II+ + R R+DD+ + N + D V + G Sbjct: 76 EYSNLKQQAGFSAEVKHVARKNAENIINKNGQRVVRTDDVGRV--NDQLYDHVTYDEHGN 133 Query: 141 IIDGSQSQMKFVG-DRSKLFNDIAKPDGKFCRYRGAKLELPSEQYKDAAQFCRDKAATLR 199 II+ QSQMKFVG D S +A D + +++PSEQY+ KA + Sbjct: 134 IIE--QSQMKFVGHDSSSALQKLASKDYQKYLDNDVPMDVPSEQYEGIKIEAEAKAKSCY 191 Query: 200 KNAASAQAKGNAEAAARLEETARNYDQLADNVVDSGLTTEQAIFYRLHPELATALDIAKN 259 + A + G + A + E A+ Y++++ N+ S +++++++ R++PE++TA DI K Sbjct: 192 EQAERLKQDGKFDIAEKKIEEAKKYEKISKNIRKSTVSSDESMEARVNPEVSTAKDIVKL 251 Query: 260 SHQAGMEGAKYGAIIGACISVVQNGYQFAQGDADAADAIIAVAGDTAKAAAIGYATAATG 319 H+AG+E AK GA IG IS+++N GD + DAI VA DT KAAA+ Y TA TG Sbjct: 252 GHRAGLEQAKMGAAIGGGISIIRNCVACFNGDKEPEDAIKDVALDTGKAAAVSYGTAFTG 311 Query: 320 SAIKSVMQQSGNQAMRNLAGTSAPALALSACIALGSSIKRYVKGEIDEAQFLMEIGEKGS 379 S IK MQ S N ++N++ TS PA+ ++ + +G + KRY GEID Q E+GEKG Sbjct: 312 SVIKGAMQNSKNAMLQNVSKTSLPAMLVTTTLEVGKTFKRYFSGEIDGVQCFEELGEKGV 371 Query: 380 GMLATGMMGMVGQIAIPIPFVGAAIGGMIGCTLSNLFYQSAVDAAREAQASRELLARTRI 439 GM+++ M + Q AIPIP VGA +G M+G S+ +Y+ ++ +EA+ + E R RI Sbjct: 372 GMMSSSMFAVAFQAAIPIPVVGALVGSMVGYAFSSAYYKEVLNVFKEAKLAHE--RRLRI 429 Query: 440 IEQAAR--QRIAEEQARLDA----FTATEIPALQSAVRELSLSLSVVNTDGDEIAISVNR 493 + A + I E + RL++ + I A+ +++ +L + D D N+ Sbjct: 430 EAECAEAIKMIREYRERLESIISEYLIDHITVFNDAINQMNSALEL--GDIDSFIEGNNK 487 Query: 494 FAALLGKQLEFGTKSEFDAFMLSDL-PLTL 522 LGK+ +F + E D FM SD+ LT+ Sbjct: 488 IINKLGKKSQFNSFKEIDDFMNSDIDTLTI 517