BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0019.p (412 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EFW82226.1| DNA-cytosine methyltransferase [Pseudomonas syrin... 724 0.0 ref|ZP_08346131.1| DNA cytosine methyltransferase M.NgoMIII [Esc... 643 0.0 gb|ABY83631.1| DNA methyltransferase Cfr42I [Citrobacter freundii] 640 0.0 ref|YP_002910057.1| DNA cytosine methyltransferase [Burkholderia... 600 e-169 ref|ZP_08406414.1| DNA cytosine methyltransferase M.NgoMIII [Hyl... 529 e-148 >gb|EFW82226.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 404 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/412 (83%), Positives = 377/412 (91%), Gaps = 8/412 (1%) Query: 1 MRSVELFAGAGAVPPPPPGGLAMGCEIAGFEHLAVVEWDKWACDTVRENQRRGYPLLAGW 60 MRSVELFAGAG GLAMGCEIAGFEHLAVVEWDKWACDTVRENQ+RGYP+LAGW Sbjct: 1 MRSVELFAGAG--------GLAMGCEIAGFEHLAVVEWDKWACDTVRENQKRGYPILAGW 52 Query: 61 NLHEGDVRAFDWSSIPQDIELLAGGPPCQPFSIGGKHKADQDNRDMFPATVEVIRRLRPK 120 NLHEGDVRAFDWS+IPQDIELLAGGPPCQPFSIGGKHKA QDNRDMFPATVE+IRRLRPK Sbjct: 53 NLHEGDVRAFDWSTIPQDIELLAGGPPCQPFSIGGKHKAHQDNRDMFPATVEIIRRLRPK 112 Query: 121 AFIVENVKGLTRSTFANYFHYIQLQLEFPELPPRQDEEWVNHLARLQVEKTSGKRKGRGL 180 AFIVENVKGLTRSTFANYFHYIQLQLEFPE PPR+DE+W +HLARLQVEKTSGK KG G+ Sbjct: 113 AFIVENVKGLTRSTFANYFHYIQLQLEFPEFPPREDEDWADHLARLQVEKTSGKSKGSGM 172 Query: 181 TYNVIPTLVNAADYGVPQKRERVFIIGFRDDLGIEWSFPAPTHSHDALLYDQWVTGAYWK 240 TYNVI TLVNAADYGVPQKRERVF+IGFRDDL +EWSFPAPTHS+DAL++DQWVTG+YW+ Sbjct: 173 TYNVIATLVNAADYGVPQKRERVFLIGFRDDLEVEWSFPAPTHSYDALIHDQWVTGSYWQ 232 Query: 241 RHGVAQPKMPARVATRVARLARAEEPPRTLPWRTVRDAIQGLPDPESSGASRLPNHVFQP 300 RHG+ +PK P ++ R +RLA +++P TLPWRTVRDAI GLPDPE + S +PNH FQ Sbjct: 233 RHGLPRPKTPQKMVARASRLALSKDPLTTLPWRTVRDAILGLPDPEFNNTSDVPNHAFQA 292 Query: 301 GARVYPGHTGSPLDLPAKTLKAGDHGVPGGENMLVRKDGSVRYFTIRESARIQTFPDGFR 360 GAR+YPGHTGSPLDLPAKTLKAGDHGVPGGENMLVR++ SVRYF+IRESARIQTFPDGFR Sbjct: 293 GARIYPGHTGSPLDLPAKTLKAGDHGVPGGENMLVRENSSVRYFSIRESARIQTFPDGFR 352 Query: 361 FHGSWTETMRQLGNAVPVVLAQRVATSVAEQLALAELARLTKIEQSIKRKRA 412 FHGSW+ETMRQLGNAVPV+LAQRVATSVAE+LA+AEL RL + EQS+KRKRA Sbjct: 353 FHGSWSETMRQLGNAVPVLLAQRVATSVAEKLAMAELKRLARSEQSVKRKRA 404 >ref|ZP_08346131.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736] gb|EGI08227.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736] Length = 413 Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/412 (74%), Positives = 345/412 (83%), Gaps = 10/412 (2%) Query: 1 MRSVELFAGAGAVPPPPPGGLAMGCEIAGFEHLAVVEWDKWACDTVRENQRRGYPLLAGW 60 M+SVELFAGAG GLAMGCEIAGFEHLAVVEWDKWACDTVREN++ G+PLL+ W Sbjct: 12 MKSVELFAGAG--------GLAMGCEIAGFEHLAVVEWDKWACDTVRENKKNGFPLLSDW 63 Query: 61 NLHEGDVRAFDWSSIPQDIELLAGGPPCQPFSIGGKHKADQDNRDMFPATVEVIRRLRPK 120 +L EGDVR FDWS IP+ I+LLAGGPPCQPFSIGGKHKA+ D+RDMFPAT E IR++RPK Sbjct: 64 DLFEGDVREFDWSKIPKGIDLLAGGPPCQPFSIGGKHKANSDSRDMFPATAEAIRQIRPK 123 Query: 121 AFIVENVKGLTRSTFANYFHYIQLQLEFPELPPRQDEEWVNHLARLQVEKTSGKRKGRGL 180 AFIVENVKGLTR+TFA+YF YIQLQLEFPE+ PR E+W HL RLQ EKTSGK KGRGL Sbjct: 124 AFIVENVKGLTRATFASYFQYIQLQLEFPEVAPRNGEDWSEHLKRLQEEKTSGKNKGRGL 183 Query: 181 TYNVIPTLVNAADYGVPQKRERVFIIGFRDDLGIEWSFPAPTHSHDALLYDQWVTGAYWK 240 TYNV+ TLVNAADYGVPQKRERVFI+GFRDDL IEWSFP PTHS+DAL+YDQWVTG YWK Sbjct: 184 TYNVLATLVNAADYGVPQKRERVFIVGFRDDLEIEWSFPKPTHSYDALVYDQWVTGDYWK 243 Query: 241 RHGVAQPKMPARVATRVARLARAEEPPRTLPWRTVRDAIQGLPDPESSGASRLPNHVFQP 300 RHG+ P +P+++ R+A+L + PP TLPW+TVRDAI LPDPE+ A + NH FQ Sbjct: 244 RHGLEMPTVPSQMVNRIAKLRK--NPPDTLPWKTVRDAIADLPDPETKAAKMIRNHAFQA 301 Query: 301 GARVYPGHTGSPLDLPAKTLKAGDHGVPGGENMLVRKDGSVRYFTIRESARIQTFPDGFR 360 GAR YPGHTGSPLDLPAKTLKAG HGVPGGENMLVR DGSVRYFT+RESARIQTFPD +R Sbjct: 302 GARTYPGHTGSPLDLPAKTLKAGAHGVPGGENMLVRDDGSVRYFTVRESARIQTFPDSYR 361 Query: 361 FHGSWTETMRQLGNAVPVVLAQRVATSVAEQLALAELARLTKIEQSIKRKRA 412 FHGSWTETMRQLGNAVPV LA VA+SVAE+L +E+ + K + KR A Sbjct: 362 FHGSWTETMRQLGNAVPVHLAYCVASSVAEKLLTSEIGNILKQGGNYKRASA 413 >gb|ABY83631.1| DNA methyltransferase Cfr42I [Citrobacter freundii] Length = 402 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/412 (74%), Positives = 345/412 (83%), Gaps = 10/412 (2%) Query: 1 MRSVELFAGAGAVPPPPPGGLAMGCEIAGFEHLAVVEWDKWACDTVRENQRRGYPLLAGW 60 M+SVELFAGAG GLAMGCEIAGFEHLAVVEWDKWACDTVREN++ G+PLL+ W Sbjct: 1 MKSVELFAGAG--------GLAMGCEIAGFEHLAVVEWDKWACDTVRENKKSGFPLLSDW 52 Query: 61 NLHEGDVRAFDWSSIPQDIELLAGGPPCQPFSIGGKHKADQDNRDMFPATVEVIRRLRPK 120 +L EGDVR FDWS IP+ I+LLAGGPPCQPFSIGGKHKA+ D+RDMFPAT E IR++RPK Sbjct: 53 DLFEGDVREFDWSKIPKGIDLLAGGPPCQPFSIGGKHKANSDSRDMFPATAEAIRQIRPK 112 Query: 121 AFIVENVKGLTRSTFANYFHYIQLQLEFPELPPRQDEEWVNHLARLQVEKTSGKRKGRGL 180 AFIVENVKGLTR+TFA YF YIQLQLEFPE+ PR E+W HL RLQ EKTSGK KGRGL Sbjct: 113 AFIVENVKGLTRATFATYFQYIQLQLEFPEVAPRNGEDWSEHLKRLQEEKTSGKNKGRGL 172 Query: 181 TYNVIPTLVNAADYGVPQKRERVFIIGFRDDLGIEWSFPAPTHSHDALLYDQWVTGAYWK 240 TYNV+ TLVNAADYG+PQKRERVFI+GFRDDL IEWSFP PTHS+DAL+YDQWVTG YWK Sbjct: 173 TYNVLATLVNAADYGIPQKRERVFIVGFRDDLEIEWSFPKPTHSYDALIYDQWVTGDYWK 232 Query: 241 RHGVAQPKMPARVATRVARLARAEEPPRTLPWRTVRDAIQGLPDPESSGASRLPNHVFQP 300 RHG+ P +P+++ +R+A+L + PP TLPW+TVRDAI LPDPE+ A + NH FQ Sbjct: 233 RHGLEMPTVPSQMVSRIAKLRK--NPPDTLPWKTVRDAIADLPDPETKAAKMIRNHGFQA 290 Query: 301 GARVYPGHTGSPLDLPAKTLKAGDHGVPGGENMLVRKDGSVRYFTIRESARIQTFPDGFR 360 GAR YPGHTGSPLDLPAKTLKAG HGVPGGENMLVR DGSVRYFT+RESARIQTFPD +R Sbjct: 291 GARTYPGHTGSPLDLPAKTLKAGAHGVPGGENMLVRDDGSVRYFTVRESARIQTFPDSYR 350 Query: 361 FHGSWTETMRQLGNAVPVVLAQRVATSVAEQLALAELARLTKIEQSIKRKRA 412 FHGSWTETMRQLGNAVPV LA VA+SVAE+L +E+ + K + KR A Sbjct: 351 FHGSWTETMRQLGNAVPVHLAYCVASSVAEKLLTSEIGNILKQGGNNKRATA 402 >ref|YP_002910057.1| DNA cytosine methyltransferase [Burkholderia glumae BGR1] gb|ACR27353.1| DNA cytosine methyltransferase M.NgoMIII [Burkholderia glumae BGR1] Length = 407 Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust. Identities = 290/412 (70%), Positives = 343/412 (83%), Gaps = 12/412 (2%) Query: 1 MRSVELFAGAGAVPPPPPGGLAMGCEIAGFEHLAVVEWDKWACDTVRENQRRGYPLLAGW 60 M++VEL+AGAG GLAMG +AGF+ LAVVEWD+WACDT+RENQRRG+PL+A W Sbjct: 1 MKAVELYAGAG--------GLAMGVGLAGFKPLAVVEWDRWACDTIRENQRRGFPLVADW 52 Query: 61 NLHEGDVRAFDWSSIP-QDIELLAGGPPCQPFSIGGKHKADQDNRDMFPATVEVIRRLRP 119 L+EGDVR FDWS + ++I+LLAGGPPCQPFS+GGKH+A D+RDMFPATV+++R+LRP Sbjct: 53 PLYEGDVRKFDWSRLEGEEIDLLAGGPPCQPFSMGGKHQAHDDSRDMFPATVDIVRKLRP 112 Query: 120 KAFIVENVKGLTRSTFANYFHYIQLQLEFPELPPRQDEEWVNHLARLQVEKTSGKRKGRG 179 KAFIVENVKGLTRSTFANY+ YI LQLEFPE+P R++EEW H RLQ E+TSG++KG+ Sbjct: 113 KAFIVENVKGLTRSTFANYYQYILLQLEFPEVPARRNEEWFEHHLRLQAERTSGRQKGKK 172 Query: 180 LTYNVIPTLVNAADYGVPQKRERVFIIGFRDDLGIEWSFPAPTHSHDALLYDQWVTGAYW 239 LTYNV+PTLVNAADYGVPQKRERVFI+GFR DL ++WSFP PTHS+D+LL DQWVTG YW Sbjct: 173 LTYNVVPTLVNAADYGVPQKRERVFIVGFRSDLDVDWSFPRPTHSYDSLLRDQWVTGEYW 232 Query: 240 KRHGV---AQPKMPARVATRVARLARAEEPPRTLPWRTVRDAIQGLPDPESSGASRLPNH 296 +RH V A+P MP VA+RV RLA + LPWRTVRDAI GLP P + AS+ +H Sbjct: 233 ERHQVPRRARPTMPESVASRVRRLAGSLPFATELPWRTVRDAIAGLPSPLARTASQYQDH 292 Query: 297 VFQPGARVYPGHTGSPLDLPAKTLKAGDHGVPGGENMLVRKDGSVRYFTIRESARIQTFP 356 FQPGARVYPGHTGSPLDLPAKTLKAGDHGVPGGENMLV DGSVRYF+IRESAR+QTFP Sbjct: 293 RFQPGARVYPGHTGSPLDLPAKTLKAGDHGVPGGENMLVNTDGSVRYFSIRESARVQTFP 352 Query: 357 DGFRFHGSWTETMRQLGNAVPVVLAQRVATSVAEQLALAELARLTKIEQSIK 408 DGF+FHGSWTETMRQLGNAVPV L VA SVAE+LA+ +L +L + +++ Sbjct: 353 DGFKFHGSWTETMRQLGNAVPVALGHVVARSVAERLAIVQLEQLARRRVTVR 404 >ref|ZP_08406414.1| DNA cytosine methyltransferase M.NgoMIII [Hylemonella gracilis ATCC 19624] gb|EGI76427.1| DNA cytosine methyltransferase M.NgoMIII [Hylemonella gracilis ATCC 19624] Length = 413 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/404 (66%), Positives = 307/404 (75%), Gaps = 16/404 (3%) Query: 1 MRSVELFAGAGAVPPPPPGGLAMGCEIAGFEHLAVVEWDKWACDTVRENQRRGYPLLAGW 60 + S+ELFAGAG GLAMG +AGF AVVEWDKWACDTVR+NQ RG+PL+ W Sbjct: 3 LTSIELFAGAG--------GLAMGVALAGFRSHAVVEWDKWACDTVRQNQERGHPLVRDW 54 Query: 61 NLHEGDVRA----FDWSSIPQDIELLAGGPPCQPFSIGGKHKADQDNRDMFPATVEVIRR 116 + EGDVR FD S + ++LLAGGPPCQPFS+GGKHKA QD RDMFPATV+VIRR Sbjct: 55 PVVEGDVRNWARDFDASGLEGKLDLLAGGPPCQPFSMGGKHKAHQDGRDMFPATVDVIRR 114 Query: 117 LRPKAFIVENVKGLTRSTFANYFHYIQLQLEFPELPPRQDEEWVNHLARLQVEKTSGKRK 176 LRP+AFIVENVKGLTRSTF NY+ YI LQLEFPEL DE W +H RLQ KT+ +R Sbjct: 115 LRPRAFIVENVKGLTRSTFHNYYQYILLQLEFPELTRLVDESWADHHQRLQRFKTAKRRG 174 Query: 177 GRGLTYNVIPTLVNAADYGVPQKRERVFIIGFRDDLGIEWSFPAPTHSHDALLYDQWVTG 236 G GL YNV+PTLVNAA+YGVPQ+RERVFI+GFR DL I+WSFP THS DALL+DQWVTG Sbjct: 175 GFGLAYNVVPTLVNAANYGVPQRRERVFIVGFRRDLPIQWSFPRETHSLDALLHDQWVTG 234 Query: 237 AYWKRHGVAQ---PKMPARVATRVARLARAEEPPRTLPWRTVRDAIQGLPDPESSGASRL 293 YW+RHGVA+ P+ A + RL PP PWRTVRDA+ GLPDP+ S L Sbjct: 235 EYWERHGVAKRARPQPHKSHAGLIERLKGLGLPPTRAPWRTVRDALLGLPDPQRSEGDVL 294 Query: 294 PNHVFQPGARVYPGHTGSPLDLPAKTLKAGDHGVPGGENMLVRKDGSVRYFTIRESARIQ 353 NH FQ GAR YPGHTGSPLDLPAKTLKAGDHGVPGGENM+V+ G RYFT+RESAR+Q Sbjct: 295 -NHQFQAGARAYPGHTGSPLDLPAKTLKAGDHGVPGGENMMVKPTGEARYFTVRESARLQ 353 Query: 354 TFPDGFRFHGSWTETMRQLGNAVPVVLAQRVATSVAEQLALAEL 397 TFPDG+ HGSWTE MRQLGNAVPV L + VA SVA+ L A+L Sbjct: 354 TFPDGYVLHGSWTEAMRQLGNAVPVALGRVVACSVAQHLLEADL 397