BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0018.p (216 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EFW82227.1| hypothetical protein PsgB076_02800 [Pseudomonas s... 385 e-105 ref|ZP_08346132.1| Eco29kI restriction endonuclease superfamily ... 323 1e-86 gb|ABY83632.1| type II restriction endonuclease Cfr42I [Citrobac... 320 1e-85 ref|YP_002910056.1| Eco29kI restriction endonuclease [Burkholder... 273 1e-71 ref|ZP_08406413.1| hypothetical protein HGR_11087 [Hylemonella g... 272 3e-71 >gb|EFW82227.1| hypothetical protein PsgB076_02800 [Pseudomonas syringae pv. glycinea str. B076] Length = 216 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 185/216 (85%), Positives = 198/216 (91%) Query: 1 VTGKVIPFNPLDKKNLGASVAEALLTKEAHLLGNLPVFEGAGIYAIYYTGDFQAYQQISR 60 +T VIPFNPLDKKNLGASVAEALLTKE H LG++PVFEGAGIYAIYYTG F+AYQQI+R Sbjct: 1 MTSNVIPFNPLDKKNLGASVAEALLTKEIHPLGDIPVFEGAGIYAIYYTGKFRAYQQIAR 60 Query: 61 LNSDNKFLLPIYVGKAVPAGARMGGSVGLTAGKVLYQRLKEHAESVKAAENLDIKDFYCR 120 LN+ KFLLPIYVGKAVPAGARMG ++ L AGK L++RLKEHAESVKAAENL+I DFY R Sbjct: 61 LNNQEKFLLPIYVGKAVPAGARMGSNLELAAGKALHKRLKEHAESVKAAENLEINDFYYR 120 Query: 121 FLVVDDIWIPLGESLIIARFTPIWNSLIDGFGNHNPGKGRHAGMRPRWDVLHPGRGWAMN 180 FLVVDDIWIPLGESLIIARFTPIWNSLIDGFGNHNPGKGRHAGMRPRWDVLHPGRGW +N Sbjct: 121 FLVVDDIWIPLGESLIIARFTPIWNSLIDGFGNHNPGKGRHAGMRPRWDVLHPGRGWDVN 180 Query: 181 LAERLETAAQIAQDAETYLRVLPACLSGQFIEAQGE 216 LAER ETA QI QDAETYLRVLPACLS QFIEA+GE Sbjct: 181 LAERPETAEQIEQDAETYLRVLPACLSSQFIEAEGE 216 >ref|ZP_08346132.1| Eco29kI restriction endonuclease superfamily protein [Escherichia coli H736] gb|EGI08228.1| Eco29kI restriction endonuclease superfamily protein [Escherichia coli H736] Length = 216 Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 151/216 (69%), Positives = 181/216 (83%) Query: 1 VTGKVIPFNPLDKKNLGASVAEALLTKEAHLLGNLPVFEGAGIYAIYYTGDFQAYQQISR 60 +TGKVIPFNPLDK+NLGASVAEALL+K+AH L L F+GAGIYAIYYTGD AY+Q++ Sbjct: 1 MTGKVIPFNPLDKQNLGASVAEALLSKDAHPLEELTSFQGAGIYAIYYTGDHPAYRQLAE 60 Query: 61 LNSDNKFLLPIYVGKAVPAGARMGGSVGLTAGKVLYQRLKEHAESVKAAENLDIKDFYCR 120 LN D +F LPIYVGKAVPAGARMG + G VL++RLKEHAES++AAENL I+DFYCR Sbjct: 61 LNRDGQFRLPIYVGKAVPAGARMGLTNPDKVGNVLFRRLKEHAESIRAAENLSIEDFYCR 120 Query: 121 FLVVDDIWIPLGESLIIARFTPIWNSLIDGFGNHNPGKGRHAGMRPRWDVLHPGRGWAMN 180 FLVVDDIWIPLGESL+I+RF PIWNS IDGFGNH+PGK R+ G+RPRWD +HPGRGWA N Sbjct: 121 FLVVDDIWIPLGESLVISRFKPIWNSSIDGFGNHDPGKHRYTGLRPRWDFMHPGRGWAQN 180 Query: 181 LAERLETAAQIAQDAETYLRVLPACLSGQFIEAQGE 216 L ER ET ++ +D+ YL+ LP CL+ +FIEA+G+ Sbjct: 181 LRERDETVDELIRDSIQYLQNLPPCLAQKFIEAEGD 216 >gb|ABY83632.1| type II restriction endonuclease Cfr42I [Citrobacter freundii] Length = 216 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 151/216 (69%), Positives = 179/216 (82%) Query: 1 VTGKVIPFNPLDKKNLGASVAEALLTKEAHLLGNLPVFEGAGIYAIYYTGDFQAYQQISR 60 +TGKVIPFNPLDK+NLGASVAEALL+K+AH + L F GAGIYAIYYTGD AY Q++ Sbjct: 1 MTGKVIPFNPLDKQNLGASVAEALLSKDAHPMEELTSFPGAGIYAIYYTGDHPAYGQLAE 60 Query: 61 LNSDNKFLLPIYVGKAVPAGARMGGSVGLTAGKVLYQRLKEHAESVKAAENLDIKDFYCR 120 LN D +F LPIYVGKAVPAGARMG + G VL++RLKEHAESV+AAENL I+DFYCR Sbjct: 61 LNRDGQFRLPIYVGKAVPAGARMGLTNPDKVGNVLFRRLKEHAESVRAAENLSIEDFYCR 120 Query: 121 FLVVDDIWIPLGESLIIARFTPIWNSLIDGFGNHNPGKGRHAGMRPRWDVLHPGRGWAMN 180 FLVVDDIWIPLGESL+I+RF PIWNS IDGFGNH+PGK R+ G+RPRWD +HPGRGWA N Sbjct: 121 FLVVDDIWIPLGESLVISRFKPIWNSSIDGFGNHDPGKHRYTGLRPRWDFMHPGRGWAQN 180 Query: 181 LAERLETAAQIAQDAETYLRVLPACLSGQFIEAQGE 216 L ER ET ++ +D+ YL+ LP CL+ +FIEA+G+ Sbjct: 181 LRERDETVDELIRDSIQYLQNLPPCLAQKFIEAEGD 216 >ref|YP_002910056.1| Eco29kI restriction endonuclease [Burkholderia glumae BGR1] gb|ACR27352.1| Eco29kI restriction endonuclease [Burkholderia glumae BGR1] Length = 220 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 128/200 (64%), Positives = 148/200 (74%) Query: 3 GKVIPFNPLDKKNLGASVAEALLTKEAHLLGNLPVFEGAGIYAIYYTGDFQAYQQISRLN 62 G +IPFNPLDKKNLGASVAEA+L ++ LG L F G GIYAIYY GDF+AY ++ N Sbjct: 6 GNIIPFNPLDKKNLGASVAEAMLEQKPQPLGELKQFFGVGIYAIYYVGDFEAYAPLAERN 65 Query: 63 SDNKFLLPIYVGKAVPAGARMGGSVGLTAGKVLYQRLKEHAESVKAAENLDIKDFYCRFL 122 + PIYVGKAVP GAR GG VG K LY RL+EHAESV+ A NLDIKDF CRFL Sbjct: 66 RNGALQAPIYVGKAVPKGARKGGGVGEVRSKALYDRLREHAESVQLATNLDIKDFVCRFL 125 Query: 123 VVDDIWIPLGESLIIARFTPIWNSLIDGFGNHNPGKGRHAGMRPRWDVLHPGRGWAMNLA 182 VVDDIWIPLGESL+IA+F P+WN+LIDGFGNH+PG GR+ G+RPRWDVLHPGR WA Sbjct: 126 VVDDIWIPLGESLLIAKFAPLWNALIDGFGNHDPGSGRYNGLRPRWDVLHPGRAWAEKCK 185 Query: 183 ERLETAAQIAQDAETYLRVL 202 R ET I +D + Y + Sbjct: 186 AREETQGHIVRDVQNYFSTI 205 >ref|ZP_08406413.1| hypothetical protein HGR_11087 [Hylemonella gracilis ATCC 19624] gb|EGI76426.1| hypothetical protein HGR_11087 [Hylemonella gracilis ATCC 19624] Length = 238 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 135/215 (62%), Positives = 165/215 (76%), Gaps = 5/215 (2%) Query: 6 IPFNPLDKKNLGASVAEALLTKEAHLLGNLPVFEGAGIYAIYYTGDFQAYQQISRLN--S 63 +PFNPLDK+NLGASVAEALL ++ H L NLP+F GAGIYA+YY GDF Y +S N S Sbjct: 5 VPFNPLDKQNLGASVAEALLGRKPHPLANLPMFHGAGIYALYYGGDFAPYLSLSLRNRES 64 Query: 64 DNKFLLPIYVGKAVPAGARMGGSVGLTAG-KVLYQRLKEHAESVKAAENLDIKDFYCRFL 122 D + PIYVGKAVPAG R GG++ T+ K L+ RL EHAES+ AA NL I+DF CRFL Sbjct: 65 DGNPIAPIYVGKAVPAGGRKGGALDQTSKTKALWNRLNEHAESIAAASNLRIEDFQCRFL 124 Query: 123 VVDDIWIPLGESLIIARFTPIWNSLIDGFGNHNPGKGRHAGMRPRWDVLHPGRGWAMNLA 182 VVDDIWIPLGESL+IA+FTPIWN+LIDGFGNH+PGKGR+ GM+P+WDVLHPGR WA+ Sbjct: 125 VVDDIWIPLGESLLIAKFTPIWNALIDGFGNHDPGKGRYNGMQPKWDVLHPGRAWALKCQ 184 Query: 183 ERLETAAQIAQDAETYLRVLPACLSGQFI--EAQG 215 R E+A QIA++A+ +L + S F+ EA+G Sbjct: 185 PRPESAEQIAREAKDHLESILPPRSPHFLVEEARG 219