BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0010.p (351 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754218.1| DNA mismatch repair protein MutL [Collimonas... 530 e-148 ref|YP_001352152.1| DNA mismatch repair protein [Janthinobacteri... 511 e-143 ref|YP_001098755.1| DNA mismatch repair protein [Herminiimonas a... 507 e-141 ref|YP_003774260.1| DNA mismatch repair protein [Herbaspirillum ... 487 e-135 ref|ZP_08273710.1| DNA mismatch repair protein MutL [Oxalobacter... 484 e-134 >ref|YP_004754218.1| DNA mismatch repair protein MutL [Collimonas fungivorans Ter331] gb|AEK63395.1| DNA mismatch repair protein MutL [Collimonas fungivorans Ter331] Length = 621 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 268/360 (74%), Positives = 293/360 (81%), Gaps = 25/360 (6%) Query: 1 VLHGDRYPSYALSLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAATSATSF 60 VLHGDRYPSY L LDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALA TSATSF Sbjct: 278 VLHGDRYPSYVLGLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAQTSATSF 337 Query: 61 GNAPAPQAASNGPLPWMRDQQGQPQ---------PQYQNAFGAQLRPNFSAGNFGVAQNT 111 G PAP + +G +PW+R Q Q PQ Q +FG P F+ GVAQ Sbjct: 338 GATPAPLPSPSGAMPWIRGSQEHLQAILQPNAQVPQQQTSFG----PQFAPAANGVAQTA 393 Query: 112 AEYGAMFQPGVQTNLDMASTFGSEAAPGAFVMPVSAGAPMQTLPADDFPLGFALAQLHGI 171 A YGA+F +T A GA + P + QTLP+DDFPLGFALAQLHGI Sbjct: 394 ANYGALFSGNERT------------ADGAAIYPATPQLASQTLPSDDFPLGFALAQLHGI 441 Query: 172 YVLAQNSKGLVVVDMHAAHERILYEQLKNALDDNSMFVQPLLIPVTFYADAVEVGTVEEH 231 Y+LAQN+KGLV+VDMHAAHERILYEQLK ALD+++M VQPLLIPVTF+ADAVEVGT EE+ Sbjct: 442 YILAQNTKGLVLVDMHAAHERILYEQLKGALDEDAMQVQPLLIPVTFFADAVEVGTAEEN 501 Query: 232 QETLSALGFDIAAMSPTTLAVRAVPALLKNADAQTLARDVLRDVREFGGSRVLLERRNEL 291 ++TL ALGFDIAA+SPTTLAVR+VPALLKNADAQTLARDVLRDVREFGGSRVL+ERRNEL Sbjct: 502 RDTLHALGFDIAAISPTTLAVRSVPALLKNADAQTLARDVLRDVREFGGSRVLVERRNEL 561 Query: 292 LGTLACHTAVRANRSLTVPEMNALLRQMEATERADQCNHGRPTWSQLALSDMDKLFLRGQ 351 LGTLACHTAVRANRSLT PEMNALLRQMEATERADQCNHGRPTWSQLALSD+DKLFLRGQ Sbjct: 562 LGTLACHTAVRANRSLTAPEMNALLRQMEATERADQCNHGRPTWSQLALSDLDKLFLRGQ 621 >ref|YP_001352152.1| DNA mismatch repair protein [Janthinobacterium sp. Marseille] sp|A6SV55.1|MUTL_JANMA RecName: Full=DNA mismatch repair protein mutL gb|ABR88766.1| DNA mismatch repair protein [Janthinobacterium sp. Marseille] Length = 613 Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust. Identities = 260/352 (73%), Positives = 288/352 (81%), Gaps = 22/352 (6%) Query: 1 VLHGDRYPSYALSLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAATSATSF 60 VLHGDRYPSY +SLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALA TSAT+F Sbjct: 283 VLHGDRYPSYVISLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAQTSATAF 342 Query: 61 GNAPAPQAASNGPLPWMRDQQGQPQPQYQNAFGAQLRPNFSAGNFGVAQNTAEYGAMFQP 120 G P+P A +G LPW+R+QQ Q F Q + + GVAQ TA YGA+F Sbjct: 343 GAVPSPTPAPSGALPWLREQQ-------QTTFAPQFQQQY-----GVAQTTANYGALF-- 388 Query: 121 GVQTNLDMAST-FGSEAAPGAFVMPVSAGAPMQTLPADDFPLGFALAQLHGIYVLAQNSK 179 N D A T G+E AP AF +P QT+ D+FPLGFALAQLHGI++LAQN+K Sbjct: 389 ----NTDGAVTPLGTEPAP-AFA--AFTNSPAQTMSDDEFPLGFALAQLHGIFILAQNTK 441 Query: 180 GLVVVDMHAAHERILYEQLKNALDDNSMFVQPLLIPVTFYADAVEVGTVEEHQETLSALG 239 GLV+VDMHAAHERILYEQLKNALDDN+M VQPLLIP+TFYAD VEVGT E+ +ETL +LG Sbjct: 442 GLVLVDMHAAHERILYEQLKNALDDNAMQVQPLLIPITFYADDVEVGTAEDSKETLLSLG 501 Query: 240 FDIAAMSPTTLAVRAVPALLKNADAQTLARDVLRDVREFGGSRVLLERRNELLGTLACHT 299 FDIA MSPTTLA+RAVP LLKNADAQ+LARDVLRDVRE+GGSRVL+ERRNELLGTLACHT Sbjct: 502 FDIAVMSPTTLAIRAVPTLLKNADAQSLARDVLRDVREYGGSRVLVERRNELLGTLACHT 561 Query: 300 AVRANRSLTVPEMNALLRQMEATERADQCNHGRPTWSQLALSDMDKLFLRGQ 351 AVRANR LT PEMNALLRQMEATERADQCNHGRPTW QL LSD+DKLF RG+ Sbjct: 562 AVRANRMLTGPEMNALLRQMEATERADQCNHGRPTWVQLGLSDLDKLFERGR 613 >ref|YP_001098755.1| DNA mismatch repair protein [Herminiimonas arsenicoxydans] sp|A4G289.1|MUTL_HERAR RecName: Full=DNA mismatch repair protein mutL emb|CAL60626.1| DNA mismatch repair protein MutL [Herminiimonas arsenicoxydans] Length = 612 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 257/351 (73%), Positives = 291/351 (82%), Gaps = 21/351 (5%) Query: 1 VLHGDRYPSYALSLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAATSATSF 60 VLHGDRYPSY +SL+LDPALVDVNVHPSKIEVRFRDSR+VHQFVFHAV+RALA TSAT+F Sbjct: 283 VLHGDRYPSYVISLELDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVTRALAQTSATAF 342 Query: 61 GNAPAPQAASNGPLPWMRDQQGQPQPQYQNAFGAQLRPNFSAGNFGVAQNTAEYGAMFQP 120 G AP+P A + LPW+R+QQ Q+ F P F++ +GVAQ+ A YGA+F Sbjct: 343 GAAPSPTPAPSSALPWLREQQ-------QSTFA----PQFNS-PYGVAQSAANYGALFAN 390 Query: 121 GVQTNLDMASTFGSEAAPGAFVMPVSAGAPMQTLPADDFPLGFALAQLHGIYVLAQNSKG 180 G +N S +A + S GA TLP D+FPLGFALAQLHGI++LAQN+KG Sbjct: 391 GPASN-------DSNSAAPSLHTAGSHGA--TTLPDDEFPLGFALAQLHGIFILAQNTKG 441 Query: 181 LVVVDMHAAHERILYEQLKNALDDNSMFVQPLLIPVTFYADAVEVGTVEEHQETLSALGF 240 LV+VDMHAAHERILYEQLK+ALDDN + VQPLLIP+TFYAD +EVGT E++Q+ L ALGF Sbjct: 442 LVLVDMHAAHERILYEQLKHALDDNELQVQPLLIPITFYADGMEVGTTEDNQDILHALGF 501 Query: 241 DIAAMSPTTLAVRAVPALLKNADAQTLARDVLRDVREFGGSRVLLERRNELLGTLACHTA 300 DIAA+SPTTLAVRAVPALLKNADAQTLARDVLRDVREFGGSRVLLERRNELLGTLACHTA Sbjct: 502 DIAALSPTTLAVRAVPALLKNADAQTLARDVLRDVREFGGSRVLLERRNELLGTLACHTA 561 Query: 301 VRANRSLTVPEMNALLRQMEATERADQCNHGRPTWSQLALSDMDKLFLRGQ 351 VRANR+LTVPEMNALLRQMEATERADQCNHGRPTW QL LSD+DKLF RG+ Sbjct: 562 VRANRTLTVPEMNALLRQMEATERADQCNHGRPTWVQLGLSDLDKLFERGR 612 >ref|YP_003774260.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1] gb|ADJ62352.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1] Length = 627 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 268/365 (73%), Positives = 285/365 (78%), Gaps = 26/365 (7%) Query: 1 VLHGDRYPSYALSLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAATSATSF 60 VLHGDRYP+YALSL LDPALVDVNVHPSKIEVRFRDSR+VHQFVFHAVSRALA TSA SF Sbjct: 275 VLHGDRYPAYALSLTLDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVSRALAQTSAVSF 334 Query: 61 GNAP--APQAASNGPLP---------WMRDQQGQPQPQYQNAFGAQL-RPNFSAGN--FG 106 GN P APQ+ + P W+ G+ Q Q +A A+ RP GN FG Sbjct: 335 GNLPGAAPQSDDSAGAPPPAANAPLPWI----GEQQQQSFSAQFAEAPRPFSFGGNSGFG 390 Query: 107 VAQNTAEYGAMFQPGVQTNLDMASTFGSEAAPGAFVMPVSAGAPMQTLPADDFPLGFALA 166 V QNT YG+MF+ A T G + A LP DFPLGFALA Sbjct: 391 VRQNTEAYGSMFRS--------APTSGEPDGSAPAAYGATPAAAPAALPEGDFPLGFALA 442 Query: 167 QLHGIYVLAQNSKGLVVVDMHAAHERILYEQLKNALDDNSMFVQPLLIPVTFYADAVEVG 226 QLHGIYVLAQN GLVVVDMHAAHERILYEQLK ALD N MFVQPLLIPVTFYAD VEVG Sbjct: 443 QLHGIYVLAQNQAGLVVVDMHAAHERILYEQLKTALDGNEMFVQPLLIPVTFYADPVEVG 502 Query: 227 TVEEHQETLSALGFDIAAMSPTTLAVRAVPALLKNADAQTLARDVLRDVREFGGSRVLLE 286 TVEEHQETLSALGFDIA MSPTTLAVRAVPALLKNADAQTLARDVLRDVRE+GGSRVLLE Sbjct: 503 TVEEHQETLSALGFDIAVMSPTTLAVRAVPALLKNADAQTLARDVLRDVREYGGSRVLLE 562 Query: 287 RRNELLGTLACHTAVRANRSLTVPEMNALLRQMEATERADQCNHGRPTWSQLALSDMDKL 346 RRNELLGTLACHTAVRANRSLT+PEMNALLRQMEATER+DQCNHGRPTW+Q+ LSD+DKL Sbjct: 563 RRNELLGTLACHTAVRANRSLTLPEMNALLRQMEATERSDQCNHGRPTWTQMGLSDLDKL 622 Query: 347 FLRGQ 351 FLRGQ Sbjct: 623 FLRGQ 627 >ref|ZP_08273710.1| DNA mismatch repair protein MutL [Oxalobacteraceae bacterium IMCC9480] gb|EGF32819.1| DNA mismatch repair protein MutL [Oxalobacteraceae bacterium IMCC9480] Length = 612 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 252/352 (71%), Positives = 281/352 (79%), Gaps = 18/352 (5%) Query: 1 VLHGDRYPSYALSLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAATSATSF 60 VLHGDRYPSY L+LDLDPALVDVNVHPSKIEVRFRDSR+VHQFVFHAV+RAL+ TSAT+ Sbjct: 278 VLHGDRYPSYVLALDLDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVTRALSQTSATAD 337 Query: 61 GNAPAPQAASNGPLPWMRDQQGQPQP-QYQNAFGAQLRPNFSAGNFGVAQNTAEYGAMFQ 119 G PAPQAA G +PW QQ QP Q +F Q P G+AQN+A YGA+F Sbjct: 338 GMVPAPQAA--GAMPWHSTQQTPAQPYTRQGSFSQQAEP-------GIAQNSARYGALFG 388 Query: 120 PGVQTNLDMASTFGSEAAPGAFVMPVSAGAPMQTLPADDFPLGFALAQLHGIYVLAQNSK 179 + + D F A G P A AP T +FPLGFALAQL GIY+LAQN Sbjct: 389 ---EKSGDSNEAFEQVAVAG--WQPSPAVAPSGTA---EFPLGFALAQLQGIYILAQNLT 440 Query: 180 GLVVVDMHAAHERILYEQLKNALDDNSMFVQPLLIPVTFYADAVEVGTVEEHQETLSALG 239 GLV+VDMHAAHERILYEQ K ALD +++ VQPLLIPVTF+ADAVEVGT E+Q TL+ALG Sbjct: 441 GLVLVDMHAAHERILYEQFKTALDTDAVVVQPLLIPVTFHADAVEVGTTAENQATLAALG 500 Query: 240 FDIAAMSPTTLAVRAVPALLKNADAQTLARDVLRDVREFGGSRVLLERRNELLGTLACHT 299 FDIAA+SPTTLAVRA+PALLKNADAQ+LARDVLRDVREFGGSRVL+ERRNELLGTLACHT Sbjct: 501 FDIAALSPTTLAVRAIPALLKNADAQSLARDVLRDVREFGGSRVLMERRNELLGTLACHT 560 Query: 300 AVRANRSLTVPEMNALLRQMEATERADQCNHGRPTWSQLALSDMDKLFLRGQ 351 AVRANR LT+PEMNALLRQMEATERADQCNHGRPTW Q+ALSD+D+LF RGQ Sbjct: 561 AVRANRILTLPEMNALLRQMEATERADQCNHGRPTWVQMALSDLDRLFQRGQ 612