BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0003.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774266.1| ferredoxin [4Fe-4S]-type protein [Herbaspiri... 444 e-123 ref|YP_004754214.1| iron-sulfur cluster-binding protein [Collimo... 409 e-112 ref|YP_001900373.1| iron-sulfur cluster binding protein [Ralston... 378 e-103 ref|YP_524541.1| 4Fe-4S cluster-binding [Rhodoferax ferrireducen... 376 e-102 ref|YP_002945344.1| iron-sulfur cluster binding protein [Variovo... 375 e-102 >ref|YP_003774266.1| ferredoxin [4Fe-4S]-type protein [Herbaspirillum seropedicae SmR1] gb|ADJ62358.1| ferredoxin [4Fe-4S]-type protein [Herbaspirillum seropedicae SmR1] Length = 347 Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust. Identities = 213/257 (82%), Positives = 230/257 (89%), Gaps = 2/257 (0%) Query: 2 VSLYARGRDYHKVLRARLQQLAGRIEKEIGAFGYRVFTDSAPVMEVALAEKSGLGWRGKH 61 VS+YARGRDYHKVLRARLQQLA RIE IG FGYRVFTDSAPVMEVALAEK+GLGWRGKH Sbjct: 90 VSIYARGRDYHKVLRARLQQLATRIEGRIGPFGYRVFTDSAPVMEVALAEKAGLGWRGKH 149 Query: 62 TLLLNREAGSMFFLGELFTDLALPVDEPVTPHCGQCSACIDVCPTQAIVAPYELDARRCI 121 TLLL+REAGSMFFLGE+ TDL LPVD+PVTPHCGQCSACI CPT AIVAPYELDARRCI Sbjct: 150 TLLLHREAGSMFFLGEMLTDLPLPVDDPVTPHCGQCSACITACPTGAIVAPYELDARRCI 209 Query: 122 SYLTIELKGSIPVELRSLIGNRVYGCDDCQLYCPWNKFAQTSTLPDFDARHGLGSASLIE 181 SYLTIELKGSIP ELR LIGNR+YGCDDCQLYCPWNKFAQ ++LPDFD RHGL SASL+ Sbjct: 210 SYLTIELKGSIPSELRPLIGNRIYGCDDCQLYCPWNKFAQRASLPDFDVRHGLDSASLVG 269 Query: 182 LLNWSEEDFNRNTEGSAIRRIGHERWLRNMAVGLGNA--AGTHKGDAEIVAALRPRLDHP 239 L WSEE+F +NTEGSAIRRIGHERWLRN+AVGLGNA A +H+GDA IVAALR RL HP Sbjct: 270 LFGWSEEEFLKNTEGSAIRRIGHERWLRNLAVGLGNAADAASHRGDAAIVAALRARLAHP 329 Query: 240 SELVREHVEWALAQHSL 256 S LV EHV+WALA+H + Sbjct: 330 SALVVEHVQWALARHGV 346 >ref|YP_004754214.1| iron-sulfur cluster-binding protein [Collimonas fungivorans Ter331] gb|AEK63391.1| Iron-sulfur cluster-binding protein [Collimonas fungivorans Ter331] Length = 368 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 202/256 (78%), Positives = 221/256 (86%) Query: 1 VVSLYARGRDYHKVLRARLQQLAGRIEKEIGAFGYRVFTDSAPVMEVALAEKSGLGWRGK 60 +SLYARGRDYHKVLR+RLQQLA RI+ EIG FGYRVFTDSAPVMEVALA+K+GLGWRGK Sbjct: 112 TISLYARGRDYHKVLRSRLQQLADRIKGEIGEFGYRVFTDSAPVMEVALAQKAGLGWRGK 171 Query: 61 HTLLLNREAGSMFFLGELFTDLALPVDEPVTPHCGQCSACIDVCPTQAIVAPYELDARRC 120 HTLLLNREAGS FFLGE+ TDL LPVD+ ++ HCGQCSACIDVCPTQAIV PY LDARRC Sbjct: 172 HTLLLNREAGSFFFLGEILTDLPLPVDQAISSHCGQCSACIDVCPTQAIVGPYRLDARRC 231 Query: 121 ISYLTIELKGSIPVELRSLIGNRVYGCDDCQLYCPWNKFAQTSTLPDFDARHGLGSASLI 180 ISYLTIELKGSIPVELR LIGNRVYGCDDCQL+CPWNKFAQ STL DFD R+GL A+L+ Sbjct: 232 ISYLTIELKGSIPVELRPLIGNRVYGCDDCQLFCPWNKFAQPSTLGDFDVRNGLDQATLV 291 Query: 181 ELLNWSEEDFNRNTEGSAIRRIGHERWLRNMAVGLGNAAGTHKGDAEIVAALRPRLDHPS 240 EL WSEE FN EGS IRRIG++RWLRNMAVGLGNAA G EI+AAL+ R D+PS Sbjct: 292 ELFGWSEEQFNSRMEGSPIRRIGYQRWLRNMAVGLGNAAAAGAGSPEIIAALQQRSDYPS 351 Query: 241 ELVREHVEWALAQHSL 256 ELVREHV WAL QH + Sbjct: 352 ELVREHVAWALQQHGI 367 >ref|YP_001900373.1| iron-sulfur cluster binding protein [Ralstonia pickettii 12J] gb|ACD27941.1| iron-sulfur cluster binding protein [Ralstonia pickettii 12J] Length = 385 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 180/258 (69%), Positives = 207/258 (80%), Gaps = 3/258 (1%) Query: 1 VVSLYARGRDYHKVLRARLQQLAGRIEKEIGAFGYRVFTDSAPVMEVALAEKSGLGWRGK 60 +SLYARGRDYHKVLR RLQ+LA +I IG +G+RVFTDSAPV+EVALA GLGWRGK Sbjct: 128 TISLYARGRDYHKVLRQRLQKLAEKIAGAIGPYGFRVFTDSAPVLEVALATNGGLGWRGK 187 Query: 61 HTLLLNREAGSMFFLGELFTDLALPVDEPVTPHCGQCSACIDVCPTQAIVAPYELDARRC 120 HTLLL+R+AGSMFFLGE+ DL PVD PV P CG C+ CIDVCPTQAIVAPY +DARRC Sbjct: 188 HTLLLDRDAGSMFFLGEILVDLPFPVDPPVEPLCGNCTRCIDVCPTQAIVAPYTVDARRC 247 Query: 121 ISYLTIELKGSIPVELRSLIGNRVYGCDDCQLYCPWNKFAQTSTLPDFDARHGLGSASLI 180 ISYLTIE KGSIPVELR+ +GNRVYGCDDCQL CPWNKFA + LPDFD R+GL +A+L Sbjct: 248 ISYLTIEHKGSIPVELRAAMGNRVYGCDDCQLICPWNKFAVPANLPDFDVRNGLDAATLA 307 Query: 181 ELLNWSEEDFNRNTEGSAIRRIGHERWLRNMAVGLGNAAGTHKGD---AEIVAALRPRLD 237 EL NW++ +FN+ EGS IRRIGHERWLRN+AV +GNA D A++ AAL+ R D Sbjct: 308 ELFNWTDAEFNQRLEGSPIRRIGHERWLRNIAVAIGNALRAPLPDTTRAQLFAALKARAD 367 Query: 238 HPSELVREHVEWALAQHS 255 SELVREHV WALAQ + Sbjct: 368 DASELVREHVAWALAQTT 385 >ref|YP_524541.1| 4Fe-4S cluster-binding [Rhodoferax ferrireducens T118] gb|ABD71010.1| 4Fe-4S cluster binding [Rhodoferax ferrireducens T118] Length = 372 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/251 (71%), Positives = 203/251 (80%), Gaps = 1/251 (0%) Query: 1 VVSLYARGRDYHKVLRARLQQLAGRIEKEIGAFGYRVFTDSAPVMEVALAEKSGLGWRGK 60 +VS+YARGRDYHKVLR RLQQL+ RI E+G FG+RVFTDSAPV+E LA +SG GWRGK Sbjct: 109 IVSVYARGRDYHKVLRKRLQQLSERIALEMGPFGHRVFTDSAPVLEAELAARSGQGWRGK 168 Query: 61 HTLLLNREAGSMFFLGELFTDLALPVDEPVTPHCGQCSACIDVCPTQAIVAPYELDARRC 120 HTL+L+REAGSMFFLGE++ DLALP PV HCG CSACI+VCPTQAIVAP +LDARRC Sbjct: 169 HTLVLSREAGSMFFLGEIYVDLALPTSAPVLGHCGSCSACIEVCPTQAIVAPQQLDARRC 228 Query: 121 ISYLTIELKGSIPVELRSLIGNRVYGCDDCQLYCPWNKFAQTSTLPDFDARHGLGSASLI 180 ISYLTIE G IP+ELR LIGNR+YGCDDCQL CPWNKFAQ S LPDFD R GLG + ++ Sbjct: 229 ISYLTIEHAGPIPLELRPLIGNRIYGCDDCQLICPWNKFAQRSALPDFDERPGLGGSQMV 288 Query: 181 ELLNWSEEDFNRNTEGSAIRRIGHERWLRNMAVGLGNAAGTHKGDAEIVAALRPRLDHPS 240 L W+EEDF R TEGS IRRIGHERWLRN+AV LGNA A++V AL R +HPS Sbjct: 289 TLFAWTEEDFLRLTEGSPIRRIGHERWLRNIAVALGNALRADPA-ADLVQALALRAEHPS 347 Query: 241 ELVREHVEWAL 251 LVREHV WAL Sbjct: 348 ALVREHVAWAL 358 >ref|YP_002945344.1| iron-sulfur cluster binding protein [Variovorax paradoxus S110] gb|ACS20078.1| iron-sulfur cluster binding protein [Variovorax paradoxus S110] Length = 362 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 179/253 (70%), Positives = 203/253 (80%), Gaps = 2/253 (0%) Query: 1 VVSLYARGRDYHKVLRARLQQLAGRIEKEIGAFGYRVFTDSAPVMEVALAEKSGLGWRGK 60 +VS+YARGRDYHKV+RARL +LA RI +E+G FG+R FTDSAPV+E LA +SG GWRGK Sbjct: 104 IVSVYARGRDYHKVMRARLARLAERIAEEVGPFGHRAFTDSAPVLEAELASRSGQGWRGK 163 Query: 61 HTLLLNREAGSMFFLGELFTDLALPVDEPVTPHCGQCSACIDVCPTQAIVAPYELDARRC 120 HTL+L+R AGSMFFLGE++ D+ALP EPV+ HCG CSACIDVCPT+AIVAPY LDARRC Sbjct: 164 HTLVLDRSAGSMFFLGEIYVDMALPESEPVSAHCGSCSACIDVCPTKAIVAPYRLDARRC 223 Query: 121 ISYLTIELKGSIPVELRSLIGNRVYGCDDCQLYCPWNKFAQTSTLPDFDARHGLGSASLI 180 ISYLTIE G IP+ELR L+GNR+YGCDDCQL CPWNKFA+ S LPDFDAR GL SL Sbjct: 224 ISYLTIEHGGPIPLELRPLMGNRIYGCDDCQLICPWNKFAKKSALPDFDAREGLTGQSLA 283 Query: 181 ELLNWSEEDFNRNTEGSAIRRIGHERWLRNMAVGLGNAAGTHKGDAEIVAALRPRLDHPS 240 L WSEE+F R TEGS IRRIGHERWLRN+AV LGNA G++ AL R PS Sbjct: 284 ALFAWSEEEFLRFTEGSPIRRIGHERWLRNIAVALGNA--LRAGESGAAEALATRASDPS 341 Query: 241 ELVREHVEWALAQ 253 ELVREHV WALAQ Sbjct: 342 ELVREHVAWALAQ 354