BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0001.p (633 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003748701.1| hypothetical protein RCFBP_mp30241 [Ralstoni... 265 3e-68 ref|YP_003749135.1| aromatic compound dioxygenase domain [Ralsto... 262 1e-67 ref|YP_004157985.1| hypothetical protein Varpa_5721 [Variovorax ... 262 2e-67 ref|ZP_02242508.1| hypothetical protein Xoryp_07510 [Xanthomonas... 251 2e-64 ref|YP_450378.1| hypothetical protein XOO_1349 [Xanthomonas oryz... 250 5e-64 >ref|YP_003748701.1| hypothetical protein RCFBP_mp30241 [Ralstonia solanacearum CFBP2957] emb|CBJ54327.1| conserved protein of unknown function, aromatic compound dioxygenase domain [Ralstonia solanacearum CFBP2957] Length = 708 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 182/528 (34%), Positives = 277/528 (52%), Gaps = 76/528 (14%) Query: 2 VKIGLFFDGTSNNKYRDEPNQAHTNVVKLFNAHKDVKGEGYQKDSSCFRFYIPGVGTRFP 61 + +GLFFDGT+NN RD P+Q+HTNVV LFNAH+D + + F FY+PGVGT+FP Sbjct: 128 IHVGLFFDGTNNNMVRDTPSQSHTNVVVLFNAHRDDRQDH-------FAFYVPGVGTKFP 180 Query: 62 ENQEWKETQEGKAMGKGGQARILFGILQVYNAVYQAFNEGTRLFTDSEL------TAKLK 115 E E +E GK GG+ARI +G+LQV+NAV+ A GT L E+ TA L Sbjct: 181 EIGEAEELDAGKTYAAGGEARIHWGMLQVFNAVHTALC-GTDLLDQKEMKHMVTSTAGLS 239 Query: 116 SYTRDVESNYDKDYPQDERRKRWFTELRDELNDKLQTRRDMIIQPRIPKIRVAVFGFSRG 175 ++ R DE+ R F +L+ L + +R PR+ K+ ++VFGFSRG Sbjct: 240 TWWR----------VGDEKMVRTFGDLQKRLLKAIDGKR-----PRVTKVHLSVFGFSRG 284 Query: 176 AIEARSFCYWLHAALEEKSTLAGMPIEINFLGLFDSVASVGLPHSAAQTTPFRFIDGHFS 235 A +AR+ C W+ A + A + + FLG+FD+VASVGL A ++P G Sbjct: 285 AAQARTCCQWIRKATGMRVGEAAL--NMRFLGIFDTVASVGL----ADSSPVG--QGFLD 336 Query: 236 WAAETLTPLPSLVKQTVHYIAAHEQRMNFPVTCVQ-GS-----NVQEVLYPGVHADVGGG 289 WA T+ ++ VH++AAHE R +FP++ + GS N +E +YPG H+DVGGG Sbjct: 337 WADGTMD--IGDFERVVHFVAAHEIRQSFPLSTARIGSKHYPPNTKEFVYPGAHSDVGGG 394 Query: 290 YCPREQGRGM-SVGQMVSQVPLLHMHKIARLAGVPLMTYRQMSSDLQADYALSPELA--- 345 Y P QG+ +++SQ+PLL M+ AR AGV L+ +M ++QAD+ ++P L Sbjct: 395 YAPGAQGKATGGRSELLSQIPLLDMYVEARNAGVKLLGLNEMRPEVQADFVVAPTLDKAF 454 Query: 346 ---ANWNAYMAAGDFAGT----YESQVREHMRMYYRFRYHWLGRMAQLPACQRATSQEQQ 398 + W M D A + +++++ H ++Y+R+R H + A A T Q Sbjct: 455 SDYSAWTGRMEKQDVAVSNGPPIQNRMQYHTQLYWRWRAH-ISSDAAFKALSSYTHASTQ 513 Query: 399 DMVSYDDLFKGDMELLRERAKGGPPRRYRANGDEIKFFAPGHSHIANREQLLRADMRQAP 458 D DLF+ +++ R+ ++ + R H+A A A Sbjct: 514 DKT---DLFESELDWRRDVSRAQEASKTR--------------HVARGRGAYVAIPPPAT 556 Query: 459 DDREALALQVFEEQRGQSKAEGIALLEEQVHDSLAGFYLGGYVSAEEK 506 + ++ + QV Q A ++ VHDS AGF+L G ++A ++ Sbjct: 557 ELQKQIVAQV--NAATQVTPGASAFFDKHVHDSHAGFWLLGPITATQR 602 >ref|YP_003749135.1| aromatic compound dioxygenase domain [Ralstonia solanacearum PSI07] emb|CBJ34484.1| conserved hypothethical protein, aromatic compound dioxygenase domain [Ralstonia solanacearum PSI07] Length = 708 Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 184/532 (34%), Positives = 275/532 (51%), Gaps = 84/532 (15%) Query: 2 VKIGLFFDGTSNNKYRDEPNQAHTNVVKLFNAHKDVKGEGYQKDSSCFRFYIPGVGTRFP 61 + +GLFFDGT+NN RD P+Q+HTNVV LFNAH++ + E FRFY+PGVGT+F Sbjct: 128 IHVGLFFDGTNNNLVRDTPSQSHTNVVVLFNAHRNDQVE-------TFRFYMPGVGTKFS 180 Query: 62 ENQEWKETQEGKAMGKGGQARILFGILQVYNAVYQAFNEGTRLFTDSEL------TAKLK 115 E E +E GK GG+ARI +G+LQV+NAV+ A GT L + E+ TA L Sbjct: 181 EIGEAEELDAGKTYAAGGEARIHWGMLQVFNAVHTALC-GTDLLDEKEMKHMVTSTAGLS 239 Query: 116 SYTRDVESNYDKDYPQDERRKRWFTELRDELNDKLQTRRDMIIQPRIPKIRVAVFGFSRG 175 ++ R DE+ R F +L+ L ++ +R PRI K+ ++VFGFSRG Sbjct: 240 TWWR----------MGDEKMVRIFGDLQKRLLKAIEGKR-----PRITKVHLSVFGFSRG 284 Query: 176 AIEARSFCYWLHAALEEKSTLAGMPIEINFLGLFDSVASVGLPHSAAQTTPFRFIDGHFS 235 A +AR+ C W+ A K + + + FLG+FD+VASVGL A ++P G Sbjct: 285 AAQARTCCQWIRKATGMK--VGEATLNMRFLGIFDTVASVGL----ADSSPVG--QGFMD 336 Query: 236 WAAETLTPLPSLVKQTVHYIAAHEQRMNFPVTCVQ------GSNVQEVLYPGVHADVGGG 289 WA T+ ++ H++AAHE R +FP++ + N +E +YPG H+DVGGG Sbjct: 337 WADGTMD--IGEFERVAHFVAAHEIRQSFPLSTARIGGKRYPPNTKEFVYPGAHSDVGGG 394 Query: 290 YCPREQGRGM-SVGQMVSQVPLLHMHKIARLAGVPLMTYRQMSSDLQADYALSPELA--- 345 Y PR QG+ M +++SQ+PL M+ AR AGV L+ +M ++QAD+ ++ L Sbjct: 395 YAPRAQGKAMGGRSELLSQIPLNDMYTEARNAGVRLLAKSEMRPEVQADFVVAQALDEAF 454 Query: 346 ---ANWNAYMAAGDFAGTYESQVREHM----RMYYRFRYHWLGRMAQLPACQRATSQEQQ 398 + W A+M D A V+ M ++Y+R+R H + A A T Q Sbjct: 455 SAYSKWTAHMEKEDVAAGKGPPVQNRMHYQTQLYWRWRAH-ISSDAAFKALSSYTHATTQ 513 Query: 399 DMVSYDDLFKGDMELLRE--RAKGGPPRRY--RANGDEIKFFAPGHSHIANREQLLRADM 454 D DLF+ +++ R+ RA+ R+ R G + AP Sbjct: 514 DKT---DLFESELDWRRDVSRAQEASKTRHVVRGRGAYVTLPAP---------------- 554 Query: 455 RQAPDDREALALQVFEEQRGQSKAEGIALLEEQVHDSLAGFYLGGYVSAEEK 506 A + ++ + +QV Q A + VHDS AGF+L G ++ ++ Sbjct: 555 --ATELQKQIVMQV--NAAAQVPAGASTFFDRHVHDSHAGFWLLGPITTAQR 602 >ref|YP_004157985.1| hypothetical protein Varpa_5721 [Variovorax paradoxus EPS] gb|ADU39874.1| Protein of unknown function DUF2235 [Variovorax paradoxus EPS] Length = 651 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 188/547 (34%), Positives = 290/547 (53%), Gaps = 67/547 (12%) Query: 1 MVKIGLFFDGTSNNKYRDEPN------QAHTNVVKLFNAHKDVKGEGYQKDSSCFRFYIP 54 M+ +G+FFDGT+NNK RD+ N ++H+NVV L + KD EGY +RFY+P Sbjct: 43 MIHVGIFFDGTNNNKKRDQENVKDPNKRSHSNVVVLHDTFKDAPDEGY------YRFYVP 96 Query: 55 GVGTRFPENQEWKETQEGKAMGKGGQARILFGILQVYNAVYQAFNEGTRLFTDSELTAKL 114 GVGT F E E ET +GK+M GG ARI + ++Q+ NA++Q G L D+ TA Sbjct: 97 GVGTPFDEVGEKTETPDGKSMAAGGDARINWAMIQLLNAMHQGIVPGRLLIEDA--TAGR 154 Query: 115 KSYTRDVESNYDKDYPQDERRKRWFTELRDELND---KLQTRRDMIIQPRIPKIRVAVFG 171 + T + ++ + +R + ++N L ++ ++ ++ V+VFG Sbjct: 155 DATTAPLHASLTTGNRLEGKRGYFIGGTLGKVNQLERLLGSKAAATPSRKLLQVNVSVFG 214 Query: 172 FSRGAIEARSFCYWLHAALEEKS-----TLAGMPIEINFLGLFDSVASVGLPHSAAQTTP 226 FSRGA +AR+FC+++H + +K TLAG+P FLGLFDSVASVG+ A ++P Sbjct: 215 FSRGAAQARAFCHFVHHIMLKKGPAGGYTLAGVPFRFQFLGLFDSVASVGM----ADSSP 270 Query: 227 F-RFIDGHFSWAAETLTPLPSLVKQTVHYIAAHEQRMNFPVTCVQ------GSNVQEVLY 279 F R + G WA TL +PS V++TVH AAHE R+NFP++ + +N E +Y Sbjct: 271 FWRGLGG---WANGTLDIVPS-VERTVHLCAAHEIRINFPLSTGRIGEKQYPANCIEKVY 326 Query: 280 PGVHADVGGGYCPREQGRGM-SVGQMVSQVPLLHMHKIARLAGVPLMTYRQMSSDLQA-- 336 PG H+DVGGGY P QG+ + S +++SQ+PLL M++ A+ + VPL+ + + + Sbjct: 327 PGAHSDVGGGYDPGCQGKAIDSRTKLLSQMPLLDMYREAQRSMVPLLNIDALKASGKTAR 386 Query: 337 ---DYALSPELAANWNAYMA-AGDFAGTYESQVREHMRMYYRFRYHWLGRMAQLPACQRA 392 D + P +NAY A GT E + H+++Y+R+R G+M +LP+ +A Sbjct: 387 TAEDLVIDPTCEKLFNAYRGFATGINGTVEDHLHGHVQLYWRWRLQHKGQMHKLPSYAKA 446 Query: 393 TSQEQQDMVSYDDLFKGDMELLRERAKGGPPRRYRANGDEIKFFAPGHSHI--ANREQL- 449 Q+Q D+ D F D+ E K R+ +AN P S + A R+ L Sbjct: 447 VRQDQIDVWESDSDFSSDIAKALE-MKQVADRQAKANP-----HGPDTSRLDQAQRDFLR 500 Query: 450 LRADMRQAPDDREALALQVFEEQRGQSKAEGIALLEEQVHDSLAGFYLGGYVSAEEKAEK 509 +R + P R + F ++ +HDS A FY+ G V+ ++ EK Sbjct: 501 VRKEYLHPPSTRMPKLVDDF--------------FDQMLHDSHASFYMVGPVTDFDRKEK 546 Query: 510 LRTWQTK 516 + Q K Sbjct: 547 IAQIQRK 553 >ref|ZP_02242508.1| hypothetical protein Xoryp_07510 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 701 Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 198/666 (29%), Positives = 318/666 (47%), Gaps = 131/666 (19%) Query: 2 VKIGLFFDGTSNNKYRDEPNQAHTNVVKLFNAHKDVKGEGYQKDSSCFRFYIPGVGTRFP 61 + +G+FFDGT+NN RD P H+N+V LF+AHKD + +CFR+YIPGVGT F Sbjct: 128 IHVGIFFDGTNNNMERDRPLLGHSNIVSLFDAHKDDR-------KTCFRYYIPGVGTPFR 180 Query: 62 ENQEWKETQEGKAMGKGGQARILFGILQVYNAVYQAFNEGTRLFTDSELTAKLKSYTRDV 121 + E E+ +GKA GG++RI + +L VYNAV A G L ++E+T + SY + Sbjct: 181 QIGETTESDDGKAFATGGESRIYWAMLLVYNAVCAAVT-GNDLLQEAEMTRLVTSYGGGL 239 Query: 122 ESNYDKDYPQDERRKRWFTELRDELNDKLQTRRDMIIQPRIPKIRVAVFGFSRGAIEARS 181 ++ + + +++ + + L ++ RR P + ++ ++VFGFSRGA +AR+ Sbjct: 240 KTAW---HLGNDKARTVLRGVHQRLLTAVEGRR-----PTVLRLNLSVFGFSRGAAQART 291 Query: 182 FCYWLHAALEEKSTLAGMPIEINFLGLFDSVASVGLPHSAAQTTPFRFIDGHFSWAAETL 241 FC WL A + + + F+GLFD+VASVGL S+ T F WA T+ Sbjct: 292 FCNWLQEAT--GGMVGTATLRLRFVGLFDTVASVGLADSSPVGTGF------MDWADGTM 343 Query: 242 TPLPSLVKQTVHYIAAHEQRMNFPVTCVQG------SNVQEVLYPGVHADVGGGYCPREQ 295 V++ +HY+AAHE R +FP++ +G S + E +YPG H+D+GGGY P +Q Sbjct: 344 EI--QGVERGLHYVAAHEIRRSFPLSTARGQGGIAVSGLSEYIYPGAHSDLGGGYSPGDQ 401 Query: 296 GRGMSV-GQMVSQVPLLHMHKIARLAGVPLMTYRQMSSDLQADYALSPELAANWNAYM-- 352 G+ +++SQ+PL MH A AG L QM D + D+ + P+L A ++AY Sbjct: 402 GKAAGARAKLLSQIPLNDMHFEAINAGSQLRHKDQML-DERPDFEVHPDLDATFSAYTQW 460 Query: 353 ------AAGDFAGTYESQV----REHMRMYYRFRY--HWLGRMAQLPACQRATSQEQQDM 400 A D A +++V + HM++Y+R+R + Q+ + + A++Q++QD+ Sbjct: 461 TTQLDEKADDVASRAKAEVDGRMQYHMQLYWRWRASKQTDAQFKQMVSYRTASAQDKQDL 520 Query: 401 VSYDDLFKGDMELLRERAKGGPPRRYRANGDEIKFFAPGHSHIANREQLLRADMRQAPDD 460 + ++ DME R + PR Sbjct: 521 WEAEGDWRRDMEQARRAVETPAPRSTVG-------------------------------- 548 Query: 461 REALALQVFEEQRGQSKAEGI--ALLEEQVHDSLAGFYLGGYVSAEEKAEKLRTWQTKPP 518 A++ +++ + Q + + A ++ VHDS AGF+L G P Sbjct: 549 --AVSRALYQAVKQQVQVPPLVDAFFDQHVHDSHAGFWLLG-----------------PQ 589 Query: 519 SEYDRYNHQAWQNFEKAKTKNRE-----LQKVLDDKAELATQAENARFNGRAGEMESLQR 573 + YDR Q + N KAK K E + +A +A A+ + ++ + +R Sbjct: 590 TTYDR---QVYINEVKAKQKTYEELTELARTTTSPEASVALHAQALTY-----QLNNFER 641 Query: 574 RGAFTDEESLLLTQGVDGQPIFPVQSDGDAGALCS--------GYVATQTGTLREGGGYL 625 R +L G FP+ +D DA + S A TGT RE G+ Sbjct: 642 R---------VLDVAAAGSAEFPLMTDADAADMASHKGIKTQAALWAMGTGTRREANGHG 692 Query: 626 MSRAVF 631 R +F Sbjct: 693 QYRRLF 698 >ref|YP_450378.1| hypothetical protein XOO_1349 [Xanthomonas oryzae pv. oryzae MAFF 311018] dbj|BAE68104.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 702 Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 198/664 (29%), Positives = 317/664 (47%), Gaps = 126/664 (18%) Query: 2 VKIGLFFDGTSNNKYRDEPNQAHTNVVKLFNAHKDVKGEGYQKDSSCFRFYIPGVGTRFP 61 + +G+FFDGT+NN RD P H+N+V LF+AHKD + +CFR+YIPGVGT F Sbjct: 128 IHVGIFFDGTNNNMERDRPLLGHSNIVSLFDAHKDDR-------KTCFRYYIPGVGTPFR 180 Query: 62 ENQEWKETQEGKAMGKGGQARILFGILQVYNAVYQAFNEGTRLFTDSELTAKLKSYTRDV 121 + E E+ +GKA GG++RI + +L VYNAV A G L ++E+T + SY + Sbjct: 181 QIGETTESDDGKAFATGGESRIYWAMLLVYNAVCAAVT-GNDLLQEAEMTRLVTSYGGGL 239 Query: 122 ESNYDKDYPQDERRKRWFTELRDELNDKLQTRRDMIIQPRIPKIRVAVFGFSRGAIEARS 181 ++ + + +++ + + L ++ RR P + ++ ++VFGFSRGA +AR+ Sbjct: 240 KTAW---HLGNDKARTVLRGVHQRLLTAVEGRR-----PTVLRLNLSVFGFSRGAAQART 291 Query: 182 FCYWLHAALEEKSTLAGMPIEINFLGLFDSVASVGLPHSAAQTTPFRFIDGHFSWAAETL 241 FC WL A + + + F+GLFD+VASVGL S+ T F WA T+ Sbjct: 292 FCNWLQEAT--GGMVGTAALRLRFVGLFDTVASVGLADSSPVGTGF------MDWADGTM 343 Query: 242 TPLPSLVKQTVHYIAAHEQRMNFPVTCVQG------SNVQEVLYPGVHADVGGGYCPREQ 295 V++ +HY+AAHE R +FP++ +G S + E +YPG H+D+GGGY P +Q Sbjct: 344 EI--QGVERGLHYVAAHEIRRSFPLSTARGQGGIAVSGLSEYIYPGAHSDLGGGYSPGDQ 401 Query: 296 GRGMSV-GQMVSQVPLLHMHKIARLAGVPLMTYRQMSSDLQADYALSPELAANWNAYM-- 352 G+ +++SQ+PL MH A AG L Q+ ++++D+ + L + + AY Sbjct: 402 GKAAGARAKLLSQIPLNDMHFEAINAGTELKRKDQLPLEIKSDFVVDEGLDSAFAAYTQW 461 Query: 353 ------AAGDFAGTYESQV----REHMRMYYRFRY--HWLGRMAQLPACQRATSQEQQDM 400 A D A +++V + HM++Y+R+R + Q+ + + A++Q++QD+ Sbjct: 462 TTQLDEKADDVASRAKAEVDGRMQYHMQLYWRWRASKQTDAQFKQMVSYRTASAQDKQDL 521 Query: 401 VSYDDLFKGDMELLRERAKGGPPRRYRANGDEIKFFAPGHSHIANREQLLRADMRQAPDD 460 + ++ DME R + PR S + + L ++Q Sbjct: 522 WEAEGDWRRDMEQARRAVETPAPR----------------STVGAVSRALYQAVKQ---- 561 Query: 461 REALALQVFEEQRGQSKAEGIALLEEQVHDSLAGFYLGGYVSAEEKAEKLRTWQTKPPSE 520 QV Q A ++ VHDS AGF+L G P + Sbjct: 562 ------QV------QVPPLVDAFFDQHVHDSHAGFWLLG-----------------PQTT 592 Query: 521 YDRYNHQAWQNFEKAKTKNRE-----LQKVLDDKAELATQAENARFNGRAGEMESLQRRG 575 YDR Q + N KAK K E + +A +A A+ + ++ + +RR Sbjct: 593 YDR---QVYINEVKAKQKTYEELTELARTTTSPEASVALHAQALTY-----QLNNFERR- 643 Query: 576 AFTDEESLLLTQGVDGQPIFPVQSDGDAGALCS--------GYVATQTGTLREGGGYLMS 627 +L G FP+ +D DA + S A TGT RE G+ Sbjct: 644 --------VLDVAAAGSAQFPLMTDADAADMASHKGIKTQAALWAMGTGTRREANGHGQY 695 Query: 628 RAVF 631 R +F Sbjct: 696 RRLF 699