BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0030.p         (51 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004754123.1| ATPases of the AAA+ class [Collimonas fungiv...    70   1e-10

>ref|YP_004754123.1| ATPases of the AAA+ class [Collimonas fungivorans Ter331]
 gb|AEK63300.1| ATPases of the AAA+ class [Collimonas fungivorans Ter331]
          Length = 135

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 38/51 (74%)

Query: 1   VDDSHLHYDKGETEVEVFLPPGKYKLLAQFADGAQRSYGHMLSHGINVIVK 51
           +DD HLH+ KG+TE  V LPPG+YKL  QFA+GA +SYG  LS  INV VK
Sbjct: 85  IDDKHLHFGKGQTETSVTLPPGEYKLTMQFANGAHQSYGPELSKTINVTVK 135