BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0026.p (155 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774545.1| acyl dehydratase [Herbaspirillum seropedicae... 211 3e-53 ref|YP_002495401.1| MaoC domain-containing protein dehydratase [... 183 9e-45 ref|YP_004681905.1| ketopantoate reductase ApbA [Cupriavidus nec... 181 3e-44 ref|YP_001630802.1| hypothetical protein Bpet2193 [Bordetella pe... 180 6e-44 ref|YP_726206.1| acyl dehydratase [Ralstonia eutropha H16] >gi|1... 179 1e-43 >ref|YP_003774545.1| acyl dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ62637.1| acyl dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 170 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 102/146 (69%), Positives = 117/146 (80%) Query: 7 YLEDFIPGQKFSHADDEELSADAIKAFATRYDPQPFHLDEAAAAQSFFGGLAASGWHTAA 66 YL+DF PGQ F + + IKAFA ++DPQPFHLDEAAA Q+FF GLAASGWHTAA Sbjct: 25 YLDDFQPGQVFRSPGSLTVHSADIKAFAAQFDPQPFHLDEAAAQQTFFKGLAASGWHTAA 84 Query: 67 LTMRLLVKTLPIHGGIIGAGFEEFRWPRPTRPGDRLHIEVEVLELKFSQSKPHQGFLKHR 126 LTMRLLV TL I GG+IGAGF+EFRWPRPTRPGD L ++ EVL +K SQSKP QGFL HR Sbjct: 85 LTMRLLVDTLNIEGGLIGAGFDEFRWPRPTRPGDTLRLDAEVLGIKTSQSKPLQGFLHHR 144 Query: 127 VTTFNQDNQPVLVMTGNLLAPRRPQA 152 VTT+NQ ++PVL+MTGNLL PRR Q Sbjct: 145 VTTYNQHDEPVLIMTGNLLVPRRSQG 170 >ref|YP_002495401.1| MaoC domain-containing protein dehydratase [Methylobacterium nodulans ORS 2060] gb|ACL55098.1| MaoC domain protein dehydratase [Methylobacterium nodulans ORS 2060] Length = 152 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 89/145 (61%), Positives = 109/145 (75%), Gaps = 2/145 (1%) Query: 6 LYLEDFIPGQKFSHADDEELSADAIKAFATRYDPQPFHLDEAAAAQSFFGGLAASGWHTA 65 LYLED PGQ + + + +SA+AIK FA YDPQPFHLDEA A SFFGGLAASGWHTA Sbjct: 4 LYLEDLAPGQIY-RSGELTVSAEAIKRFAAEYDPQPFHLDEARAEASFFGGLAASGWHTA 62 Query: 66 ALTMRLLVKT-LPIHGGIIGAGFEEFRWPRPTRPGDRLHIEVEVLELKFSQSKPHQGFLK 124 ALTMRLLV++ LP+ GG+IGAG +E RWPRP RPG+ + +E EVLE++ S+S+P QG K Sbjct: 63 ALTMRLLVESGLPLAGGVIGAGMDELRWPRPLRPGETIRLESEVLEVRPSRSRPMQGLAK 122 Query: 125 HRVTTFNQDNQPVLVMTGNLLAPRR 149 R TT NQ +PV V+ NL+ RR Sbjct: 123 VRTTTLNQQGEPVQVLVANLVVLRR 147 >ref|YP_004681905.1| ketopantoate reductase ApbA [Cupriavidus necator N-1] gb|AEI80673.1| acyl dehydratase [Cupriavidus necator N-1] Length = 157 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/149 (59%), Positives = 108/149 (72%), Gaps = 2/149 (1%) Query: 3 VNLLYLEDFIPGQKFSHADDEELSADAIKAFATRYDPQPFHLDEAAAAQSFFGGLAASGW 62 +N+ Y+ED PGQK+ + + + IKAFA +DPQPFHLDEAAA + F GLAASGW Sbjct: 1 MNIQYIEDLAPGQKYG-SGRLTVEPERIKAFAAEFDPQPFHLDEAAARDTLFRGLAASGW 59 Query: 63 HTAALTMRLLVK-TLPIHGGIIGAGFEEFRWPRPTRPGDRLHIEVEVLELKFSQSKPHQG 121 HTAALTMRLLV GGI+GAGFEE RWP+P RPGD LHIE E+LE++ S+S+P QG Sbjct: 60 HTAALTMRLLVDGEFRPAGGILGAGFEELRWPKPVRPGDELHIESEILEVRISKSRPDQG 119 Query: 122 FLKHRVTTFNQDNQPVLVMTGNLLAPRRP 150 +K R TTFNQ +PV V T NL+ RRP Sbjct: 120 IVKVRTTTFNQAGEPVQVFTANLIVQRRP 148 >ref|YP_001630802.1| hypothetical protein Bpet2193 [Bordetella petrii DSM 12804] emb|CAP42534.1| conserved hypothetical protein [Bordetella petrii] Length = 155 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 85/151 (56%), Positives = 108/151 (71%), Gaps = 1/151 (0%) Query: 3 VNLLYLEDFIPGQKFSHADDEELSADAIKAFATRYDPQPFHLDEAAAAQSFFGGLAASGW 62 + +LYLED GQ+++ + + + +K+FAT +DPQPFHLDE AA+ S F GLAASGW Sbjct: 1 MTILYLEDLAAGQRYAGSTRIRVEENRLKSFATEFDPQPFHLDETAASSSIFRGLAASGW 60 Query: 63 HTAALTMRLLVKT-LPIHGGIIGAGFEEFRWPRPTRPGDRLHIEVEVLELKFSQSKPHQG 121 HTAA+TMRLLV + GGI+GAGF+E RWP P RPGD L +E EVLE++ S+S+P QG Sbjct: 61 HTAAITMRLLVDSEFKPAGGIVGAGFDELRWPLPVRPGDELRVESEVLEVRPSKSRPEQG 120 Query: 122 FLKHRVTTFNQDNQPVLVMTGNLLAPRRPQA 152 K R TT NQD + V V GNL+ PRRP A Sbjct: 121 IAKVRTTTLNQDGKTVQVSVGNLVVPRRPGA 151 >ref|YP_726206.1| acyl dehydratase [Ralstonia eutropha H16] ref|YP_841282.1| hypothetical protein H16_B1770 [Ralstonia eutropha H16] emb|CAJ92838.1| predicted acyl dehydratase [Ralstonia eutropha H16] emb|CAJ96552.1| Hypothetical protein H16_B1770 [Ralstonia eutropha H16] Length = 157 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 88/149 (59%), Positives = 109/149 (73%), Gaps = 2/149 (1%) Query: 3 VNLLYLEDFIPGQKFSHADDEELSADAIKAFATRYDPQPFHLDEAAAAQSFFGGLAASGW 62 +N+ Y+ED GQ++ + ++ + IKAFA +DPQPFHLDEAAA + F GLAASGW Sbjct: 1 MNIQYIEDLAAGQRYG-SGRLTVAPERIKAFAAEFDPQPFHLDEAAARDTLFRGLAASGW 59 Query: 63 HTAALTMRLLVK-TLPIHGGIIGAGFEEFRWPRPTRPGDRLHIEVEVLELKFSQSKPHQG 121 HTAALTMRLLV GGI+GAGFEE RWPRP RPGD LHIE E+LE++ S+S+P QG Sbjct: 60 HTAALTMRLLVDGEFRPAGGIVGAGFEELRWPRPVRPGDELHIESEILEVRISKSRPDQG 119 Query: 122 FLKHRVTTFNQDNQPVLVMTGNLLAPRRP 150 +K R TTFNQ ++PV V TGNL+ RP Sbjct: 120 VVKVRTTTFNQADEPVQVFTGNLIVQCRP 148