BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0011.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004688598.1| semialdehyde dehydrogenase NAD-binding prote... 483 e-134 ref|YP_546952.1| hypothetical protein Bpro_0087 [Polaromonas sp.... 457 e-127 ref|ZP_02886749.1| semialdehyde dehydrogenase NAD - binding [Bur... 457 e-127 ref|YP_001417818.1| semialdehyde dehydrogenase [Xanthobacter aut... 445 e-123 ref|YP_002497695.1| semialdehyde dehydrogenase NAD - binding [Me... 442 e-122 >ref|YP_004688598.1| semialdehyde dehydrogenase NAD-binding protein [Cupriavidus necator N-1] gb|AEI82560.1| semialdehyde dehydrogenase NAD-binding protein [Cupriavidus necator N-1] Length = 276 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 234/281 (83%), Positives = 257/281 (91%), Gaps = 5/281 (1%) Query: 1 MKEKIALFGAGGKMGVRLAKNLKKSDYRVAHVEVSQAGQQRLKEELDVECVSIDAALDNV 60 MKEKIALFGAGGKMGVRLAKNL KSDYRV+HVEVS+ G++RLK+EL +ECVS +AALDNV Sbjct: 1 MKEKIALFGAGGKMGVRLAKNLLKSDYRVSHVEVSEVGKKRLKDELGLECVSTEAALDNV 60 Query: 61 DVVILAVPDTLIGRIAAEISPKLRPGVMVMTLDAAAPFAGHLPDRPDLVYFVAHPCHPPI 120 DVVILAVPDT+IG+IAA+I+P+LRPG MVMTLDAAAPFAGHLPDRPDL YFVAHPCHP I Sbjct: 61 DVVILAVPDTIIGKIAAQIAPQLRPGTMVMTLDAAAPFAGHLPDRPDLTYFVAHPCHPLI 120 Query: 121 FNDETTQEGRRDFFGGGAAKPGAAKQSITSALMQGPESAFDLGEDVAKVIYQPILRSYRL 180 FNDET E RRD+FGGGAAK QSITSALMQGPE AFDLGE VAKVIY PILRSYRL Sbjct: 121 FNDETDPEARRDYFGGGAAK-----QSITSALMQGPEEAFDLGEAVAKVIYAPILRSYRL 175 Query: 181 TVDQMAILEPGLSETVCATLLYAMKQAMDETVRRGVPEEAARDFLLGHMNILGAVIFKEI 240 TVDQMA+LEPGLSET+CATLL M++AMDETVRRGVP+EAARDFLLGHMNILGAVIF EI Sbjct: 176 TVDQMALLEPGLSETICATLLQVMREAMDETVRRGVPKEAARDFLLGHMNILGAVIFNEI 235 Query: 241 PGAFSDACNKAIQNGLPRLLRDDWLKVFEHDEIAESIRRIT 281 PGAFSDACNKAI+ G PRL+RDDW+KVF+ +EIAESIRRIT Sbjct: 236 PGAFSDACNKAIEFGKPRLMRDDWIKVFDREEIAESIRRIT 276 >ref|YP_546952.1| hypothetical protein Bpro_0087 [Polaromonas sp. JS666] gb|ABE42054.1| conserved hypothetical protein [Polaromonas sp. JS666] Length = 276 Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust. Identities = 223/281 (79%), Positives = 246/281 (87%), Gaps = 5/281 (1%) Query: 1 MKEKIALFGAGGKMGVRLAKNLKKSDYRVAHVEVSQAGQQRLKEELDVECVSIDAALDNV 60 MK IALFGAGGKMGVRLA+NL+ SDYRV HVEV G+QRLK+EL V+CVS+DAALD Sbjct: 1 MKTTIALFGAGGKMGVRLARNLQGSDYRVRHVEVGAVGRQRLKDELGVDCVSVDAALDGA 60 Query: 61 DVVILAVPDTLIGRIAAEISPKLRPGVMVMTLDAAAPFAGHLPDRPDLVYFVAHPCHPPI 120 VVILAVPDTLIG++AAEISPKL+PG MV+TLDAAAPFAGHLPDRPDLVYFVAHPCHPPI Sbjct: 61 GVVILAVPDTLIGKVAAEISPKLQPGTMVITLDAAAPFAGHLPDRPDLVYFVAHPCHPPI 120 Query: 121 FNDETTQEGRRDFFGGGAAKPGAAKQSITSALMQGPESAFDLGEDVAKVIYQPILRSYRL 180 FNDE+T E RRDFFGG AKQSI SALMQG ++ F+LGE VAKVIYQPILRSYRL Sbjct: 121 FNDESTSEARRDFFGG-----AHAKQSIVSALMQGTDADFELGEAVAKVIYQPILRSYRL 175 Query: 181 TVDQMAILEPGLSETVCATLLYAMKQAMDETVRRGVPEEAARDFLLGHMNILGAVIFKEI 240 TV+QMA+LEPGLSETVCATLL M++AMDE V RGVP++AARDFLLGHM ILGAVIFKEI Sbjct: 176 TVEQMALLEPGLSETVCATLLDVMREAMDEVVARGVPKDAARDFLLGHMTILGAVIFKEI 235 Query: 241 PGAFSDACNKAIQNGLPRLLRDDWLKVFEHDEIAESIRRIT 281 PG FSDACNKAI G PRL+RDDW KVF+HDEIA+SIRRIT Sbjct: 236 PGQFSDACNKAIAFGKPRLMRDDWKKVFDHDEIADSIRRIT 276 >ref|ZP_02886749.1| semialdehyde dehydrogenase NAD - binding [Burkholderia graminis C4D1M] gb|EDT07590.1| semialdehyde dehydrogenase NAD - binding [Burkholderia graminis C4D1M] Length = 276 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 222/281 (79%), Positives = 245/281 (87%), Gaps = 5/281 (1%) Query: 1 MKEKIALFGAGGKMGVRLAKNLKKSDYRVAHVEVSQAGQQRLKEELDVECVSIDAALDNV 60 MKEKIALFGAGGKMG RL NL KSDYRVAHVEVS+AGQ+RL+EEL+V+CVS DAALD Sbjct: 1 MKEKIALFGAGGKMGFRLTSNLLKSDYRVAHVEVSEAGQKRLREELNVDCVSTDAALDGA 60 Query: 61 DVVILAVPDTLIGRIAAEISPKLRPGVMVMTLDAAAPFAGHLPDRPDLVYFVAHPCHPPI 120 VVILAVPDTLIG+++ EI+PKL G MVMTLDAAAPFAGHLP+RPDL YFVAHPCHP I Sbjct: 61 QVVILAVPDTLIGKLSHEIAPKLPAGTMVMTLDAAAPFAGHLPERPDLTYFVAHPCHPII 120 Query: 121 FNDETTQEGRRDFFGGGAAKPGAAKQSITSALMQGPESAFDLGEDVAKVIYQPILRSYRL 180 FN++ + RRDFFGG AK QSITSALMQGPE AFDLGEDVAKVIY PILRSYRL Sbjct: 121 FNNDDDPKARRDFFGGAYAK-----QSITSALMQGPEEAFDLGEDVAKVIYAPILRSYRL 175 Query: 181 TVDQMAILEPGLSETVCATLLYAMKQAMDETVRRGVPEEAARDFLLGHMNILGAVIFKEI 240 +VDQMA+LEPGLSET+CATLLY M++AMDETV+RGVP+EAARDFLLGHMNIL AVIF EI Sbjct: 176 SVDQMALLEPGLSETICATLLYVMREAMDETVKRGVPKEAARDFLLGHMNILSAVIFNEI 235 Query: 241 PGAFSDACNKAIQNGLPRLLRDDWLKVFEHDEIAESIRRIT 281 PGAFSDACNKAI+ G PRL+RDDW VF+ EIAESIRRIT Sbjct: 236 PGAFSDACNKAIEFGKPRLMRDDWKNVFDRAEIAESIRRIT 276 >ref|YP_001417818.1| semialdehyde dehydrogenase [Xanthobacter autotrophicus Py2] gb|ABS68161.1| Semialdehyde dehydrogenase NAD - binding [Xanthobacter autotrophicus Py2] Length = 276 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 218/281 (77%), Positives = 238/281 (84%), Gaps = 5/281 (1%) Query: 1 MKEKIALFGAGGKMGVRLAKNLKKSDYRVAHVEVSQAGQQRLKEELDVECVSIDAALDNV 60 M KIALFGAGGKMGVRL+KNL KSD++VAHVEVS G++RLK+E+ V+C IDAALD Sbjct: 1 MNAKIALFGAGGKMGVRLSKNLAKSDFQVAHVEVSDIGRKRLKDEVGVDCTEIDAALDGA 60 Query: 61 DVVILAVPDTLIGRIAAEISPKLRPGVMVMTLDAAAPFAGHLPDRPDLVYFVAHPCHPPI 120 DVVILAVPDTLIG++A ISPKL+ G MVM LDAAAPFAGHLPDRPDL+YFV+HPCHP I Sbjct: 61 DVVILAVPDTLIGKVAHSISPKLKAGTMVMLLDAAAPFAGHLPDRPDLIYFVSHPCHPLI 120 Query: 121 FNDETTQEGRRDFFGGGAAKPGAAKQSITSALMQGPESAFDLGEDVAKVIYQPILRSYRL 180 FNDET RRDFFGG AK QSITSALMQGP+ AF LGE VAK IY PILRSYRL Sbjct: 121 FNDETDPAARRDFFGGAGAK-----QSITSALMQGPDEAFALGEAVAKAIYAPILRSYRL 175 Query: 181 TVDQMAILEPGLSETVCATLLYAMKQAMDETVRRGVPEEAARDFLLGHMNILGAVIFKEI 240 TVDQMAILEPGLSET+CATLL M++AMDETVRRGVPEE ARDFLLGHMNIL AVIFKEI Sbjct: 176 TVDQMAILEPGLSETICATLLDVMREAMDETVRRGVPEECARDFLLGHMNILAAVIFKEI 235 Query: 241 PGAFSDACNKAIQNGLPRLLRDDWLKVFEHDEIAESIRRIT 281 PG FSDACNKAIQ G PRL+RDDW+K + EIAESIRRIT Sbjct: 236 PGVFSDACNKAIQFGKPRLMRDDWIKCLDKPEIAESIRRIT 276 >ref|YP_002497695.1| semialdehyde dehydrogenase NAD - binding [Methylobacterium nodulans ORS 2060] gb|ACL57392.1| semialdehyde dehydrogenase NAD - binding [Methylobacterium nodulans ORS 2060] Length = 276 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 212/281 (75%), Positives = 243/281 (86%), Gaps = 5/281 (1%) Query: 1 MKEKIALFGAGGKMGVRLAKNLKKSDYRVAHVEVSQAGQQRLKEELDVECVSIDAALDNV 60 M E+IALFGAGGKMGVRLA+NL KS++RV+HVEV +AG++RLK+EL ++C+ DAALD Sbjct: 1 MNERIALFGAGGKMGVRLARNLVKSEFRVSHVEVGEAGRRRLKDELGLDCIDADAALDGA 60 Query: 61 DVVILAVPDTLIGRIAAEISPKLRPGVMVMTLDAAAPFAGHLPDRPDLVYFVAHPCHPPI 120 +VVILAVPDTLIG+++ ++SPKL+PG MV+ LDAAAPFAGHLP+RPDL YFV HPCHPPI Sbjct: 61 EVVILAVPDTLIGKVSHDLSPKLKPGTMVVILDAAAPFAGHLPERPDLTYFVTHPCHPPI 120 Query: 121 FNDETTQEGRRDFFGGGAAKPGAAKQSITSALMQGPESAFDLGEDVAKVIYQPILRSYRL 180 FNDETT EGRRD+FGG AAKQSITSALMQGPE AFDLGE VAK I+ PILRSYRL Sbjct: 121 FNDETTPEGRRDYFGG-----IAAKQSITSALMQGPEEAFDLGERVAKAIWAPILRSYRL 175 Query: 181 TVDQMAILEPGLSETVCATLLYAMKQAMDETVRRGVPEEAARDFLLGHMNILGAVIFKEI 240 TV+QMA+LEPGLSETVCATLL M++AMDETVRRGVP E ARDFLLGH+NIL AV FKE+ Sbjct: 176 TVEQMALLEPGLSETVCATLLDVMREAMDETVRRGVPAECARDFLLGHLNILAAVTFKEV 235 Query: 241 PGAFSDACNKAIQNGLPRLLRDDWLKVFEHDEIAESIRRIT 281 PG FSDACNKAIQ G PRL+RDDWL + EIAESIRRIT Sbjct: 236 PGVFSDACNKAIQFGKPRLMRDDWLGCLDEAEIAESIRRIT 276