BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0004.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_438726.1| major facilitator family transporter [Burkholde...    71   5e-11
ref|ZP_02369946.1| major facilitator family transporter [Burkhol...    71   6e-11
ref|ZP_02383876.1| major facilitator family transporter [Burkhol...    71   6e-11
ref|ZP_02467185.1| major facilitator family transporter [Burkhol...    67   7e-10
ref|ZP_02503055.1| transporter, major facilitator family protein...    65   3e-09

>ref|YP_438726.1| major facilitator family transporter [Burkholderia thailandensis
           E264]
 gb|ABC34561.1| major facilitator family transporter [Burkholderia thailandensis
           E264]
          Length = 503

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 62/108 (57%)

Query: 6   GTFKLMNAGAIVQLISVAGLITLGVLDERHVAPLIVCWMLFCAGLGLRGPSTVTRALSVP 65
           G  ++++ GA++Q  + A  + L   D R  A ++  WMLFC  LGLRGP+++ RAL+  
Sbjct: 374 GLDRIISLGALLQFAASAAFLLLAYADWRSTALVVATWMLFCGSLGLRGPASMARALAAE 433

Query: 66  KSLTSLASGFLMFLALTLSGVGTQIAGFLLHRGLLPVALLVAAMILAS 113
            ++   A+G LMF  L  + + TQ     LH GL PVA + A   LAS
Sbjct: 434 PAVAGRAAGLLMFFGLGGAALATQAVAPFLHLGLAPVAWMCAGFTLAS 481


>ref|ZP_02369946.1| major facilitator family transporter [Burkholderia thailandensis
           TXDOH]
          Length = 397

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 62/108 (57%)

Query: 6   GTFKLMNAGAIVQLISVAGLITLGVLDERHVAPLIVCWMLFCAGLGLRGPSTVTRALSVP 65
           G  ++++ GA++Q  + A  + L   D R  A ++  WMLFC  LGLRGP+++ RAL+  
Sbjct: 268 GLDRIISLGALLQFAASAAFLLLAYADWRSTALVVATWMLFCGSLGLRGPASMARALAAE 327

Query: 66  KSLTSLASGFLMFLALTLSGVGTQIAGFLLHRGLLPVALLVAAMILAS 113
            ++   A+G LMF  L  + + TQ     LH GL PVA + A   LAS
Sbjct: 328 PAVAGRAAGLLMFFGLGGAALATQAVAPFLHLGLAPVAWMCAGFTLAS 375


>ref|ZP_02383876.1| major facilitator family transporter [Burkholderia thailandensis
           Bt4]
 ref|ZP_05590066.1| major facilitator family transporter [Burkholderia thailandensis
           E264]
          Length = 397

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 62/108 (57%)

Query: 6   GTFKLMNAGAIVQLISVAGLITLGVLDERHVAPLIVCWMLFCAGLGLRGPSTVTRALSVP 65
           G  ++++ GA++Q  + A  + L   D R  A ++  WMLFC  LGLRGP+++ RAL+  
Sbjct: 268 GLDRIISLGALLQFAASAAFLLLAYADWRSTALVVATWMLFCGSLGLRGPASMARALAAE 327

Query: 66  KSLTSLASGFLMFLALTLSGVGTQIAGFLLHRGLLPVALLVAAMILAS 113
            ++   A+G LMF  L  + + TQ     LH GL PVA + A   LAS
Sbjct: 328 PAVAGRAAGLLMFFGLGGAALATQAVAPFLHLGLAPVAWMCAGFTLAS 375


>ref|ZP_02467185.1| major facilitator family transporter [Burkholderia thailandensis
           MSMB43]
          Length = 389

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 61/108 (56%)

Query: 6   GTFKLMNAGAIVQLISVAGLITLGVLDERHVAPLIVCWMLFCAGLGLRGPSTVTRALSVP 65
           G  ++++ GA++Q  + A  + L   D R  A ++  WMLFC  LGLRGP+++ RAL+  
Sbjct: 260 GLDRIISLGALLQFAASAAFLLLAYADWRSTALVVASWMLFCGSLGLRGPASMARALAAE 319

Query: 66  KSLTSLASGFLMFLALTLSGVGTQIAGFLLHRGLLPVALLVAAMILAS 113
            ++   A+G LMF  L  + + TQ     L  GL PVA + A   LAS
Sbjct: 320 PAVAGRAAGLLMFFGLGGAALATQAVAPFLPLGLAPVAWMCAGFTLAS 367


>ref|ZP_02503055.1| transporter, major facilitator family protein [Burkholderia
           pseudomallei 112]
          Length = 401

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%)

Query: 6   GTFKLMNAGAIVQLISVAGLITLGVLDERHVAPLIVCWMLFCAGLGLRGPSTVTRALSVP 65
           G  +++  GA++Q  + A  + L   D R    ++  WMLFC  LGLRGP+++ RAL+  
Sbjct: 272 GLDRIIALGALLQFAASAAFLLLAYADWRSTPLVVASWMLFCGSLGLRGPASMARALAAE 331

Query: 66  KSLTSLASGFLMFLALTLSGVGTQIAGFLLHRGLLPVALLVAAMILAS 113
            ++   A+G LMF  L  + + TQ     L  GL PVA + A   LAS
Sbjct: 332 PAVAGRAAGLLMFFGLGGAALATQAVAPFLRLGLAPVAWMCAGFTLAS 379