BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0182.p         (161 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001355329.1| tRNA uridine 5-carboxymethylaminomethyl modi...   293   4e-78
ref|YP_003778159.1| glucose inhibited division GidA protein [Her...   293   5e-78
sp|A4GAI2.2|MNMG_HERAR RecName: Full=tRNA uridine 5-carboxymethy...   289   8e-77
ref|YP_004755049.1| tRNA uridine 5-carboxymethylaminomethyl modi...   287   3e-76
ref|ZP_08272541.1| tRNA uridine 5-carboxymethylaminomethyl modif...   286   7e-76

>ref|YP_001355329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
           [Janthinobacterium sp. Marseille]
 sp|A6T482.1|MNMG_JANMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme MnmG; AltName: Full=Glucose-inhibited division
           protein A
 gb|ABR89240.1| glucose inhibited division protein A [Janthinobacterium sp.
           Marseille]
          Length = 645

 Score =  293 bits (751), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 145/162 (89%), Positives = 150/162 (92%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ+TLLL+HNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQSTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDL+VEGDRVIGAVTQ GIKF 
Sbjct: 88  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLLVEGDRVIGAVTQVGIKFY 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
            RAVVLTAGTFLDGKIHVGLNNYSAGRA   PA    +R + 
Sbjct: 148 ARAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAISLSARLKE 189


>ref|YP_003778159.1| glucose inhibited division GidA protein [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ66251.1| glucose inhibited division GidA protein [Herbaspirillum seropedicae
           SmR1]
          Length = 642

 Score =  293 bits (750), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 145/162 (89%), Positives = 150/162 (92%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ TLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADRILYK AIRSRLENQPNLWLFQQAVDDLM+EGDRV+GAVTQAGI+FA
Sbjct: 88  KGPAVRATRAQADRILYKAAIRSRLENQPNLWLFQQAVDDLMLEGDRVVGAVTQAGIRFA 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
           GRAVVLTAGTFLDGKIHVGLNNYS GRA   PA    +R + 
Sbjct: 148 GRAVVLTAGTFLDGKIHVGLNNYSGGRAGDPPAVSLSARLKE 189


>sp|A4GAI2.2|MNMG_HERAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme MnmG; AltName: Full=Glucose-inhibited division
           protein A
 emb|CAL63519.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA
           (Glucose-inhibited division protein A) [Herminiimonas
           arsenicoxydans]
          Length = 645

 Score =  289 bits (740), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 141/162 (87%), Positives = 150/162 (92%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ+TLLLTHNIETLGQMSCNPSIGGIGKGHLV+EVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQSTLLLTHNIETLGQMSCNPSIGGIGKGHLVREVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQ VDDL+VEGDRV+GAVTQAGI+F 
Sbjct: 88  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQGVDDLLVEGDRVVGAVTQAGIQFR 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
            RAVVLTAGTFLDGKIH+G+NNYSAGRA   PA    +R + 
Sbjct: 148 ARAVVLTAGTFLDGKIHIGMNNYSAGRAGDPPAISLSARLKE 189


>ref|YP_004755049.1| tRNA uridine 5-carboxymethylaminomethyl modification protein gidA
           [Collimonas fungivorans Ter331]
 gb|AEK64226.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA
           [Collimonas fungivorans Ter331]
          Length = 641

 Score =  287 bits (735), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 143/162 (88%), Positives = 148/162 (91%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ TLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADRILYKQAIRSRLENQ NLWLFQQAVDDL+VEGDRV+GAVTQ GI+F 
Sbjct: 88  KGPAVRATRAQADRILYKQAIRSRLENQENLWLFQQAVDDLLVEGDRVVGAVTQVGIQFR 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
            RAVVLTAGTFLDGKIHVGLNNYSAGRA   PA    +R + 
Sbjct: 148 SRAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAISLSARLKE 189


>ref|ZP_08272541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 644

 Score =  286 bits (732), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 140/162 (86%), Positives = 149/162 (91%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ TLLL+HNIETLGQMSCNPSIGGIGKGHLV+EVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVREVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADR+LYKQAIR+RLENQPNLWLFQQAVDDL+VEGDRV+GAVTQ GI+F 
Sbjct: 88  KGPAVRATRAQADRLLYKQAIRTRLENQPNLWLFQQAVDDLIVEGDRVVGAVTQIGIQFR 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
            RAVVLTAGTFLDGKIHVGLNNYSAGRA   PA    +R + 
Sbjct: 148 SRAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAVTLSARLKE 189