BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0181.p (432 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778159.1| glucose inhibited division GidA protein [Her... 798 0.0 ref|YP_004755049.1| tRNA uridine 5-carboxymethylaminomethyl modi... 785 0.0 ref|YP_001355329.1| tRNA uridine 5-carboxymethylaminomethyl modi... 769 0.0 sp|A4GAI2.2|MNMG_HERAR RecName: Full=tRNA uridine 5-carboxymethy... 756 0.0 ref|YP_001101640.1| tRNA uridine 5-carboxymethylaminomethyl modi... 754 0.0 >ref|YP_003778159.1| glucose inhibited division GidA protein [Herbaspirillum seropedicae SmR1] gb|ADJ66251.1| glucose inhibited division GidA protein [Herbaspirillum seropedicae SmR1] Length = 642 Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/432 (87%), Positives = 408/432 (94%), Gaps = 3/432 (0%) Query: 1 VLEEQPGDLDPIPVFSVMGNVGMHPQQMPCWITHTNTQTHDIIRAGLDRSPMYTGVIEGV 60 +LEEQPGDLDP+PVFSVMGN MHP+QMPCWITHTN++THDIIR GLDRSPMYTGVIEGV Sbjct: 214 ILEEQPGDLDPVPVFSVMGNAAMHPRQMPCWITHTNSRTHDIIRGGLDRSPMYTGVIEGV 273 Query: 61 GPRYCPSIEDKIHRFAGKDSHQIYLEPEGLTTNEFYPNGISTSLPFDVQLALVRSMRGME 120 GPRYCPSIEDKIHRFA KDSHQIYLEPEGLTT+EFYPNGISTSLPFDVQL LVRSM+GME Sbjct: 274 GPRYCPSIEDKIHRFASKDSHQIYLEPEGLTTHEFYPNGISTSLPFDVQLELVRSMKGME 333 Query: 121 NAHILRPGYAIEYDYFDPRGLKSSLETRQIQGLFFAGQINGTTGYEEAAAQGMLAGLNAA 180 NAHILRPGYAIEYDY+DPRGLKSSLETRQ+QGLFFAGQINGTTGYEEAAAQGMLAG+NAA Sbjct: 334 NAHILRPGYAIEYDYYDPRGLKSSLETRQVQGLFFAGQINGTTGYEEAAAQGMLAGINAA 393 Query: 181 LQTQGRDSWTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNADLRLTEIG 240 LQTQGR++WTPRRDEAYLGVLVDDL+TQGV EPYRMFTSRAEYRLSLREDNADLRLTEIG Sbjct: 394 LQTQGREAWTPRRDEAYLGVLVDDLVTQGVQEPYRMFTSRAEYRLSLREDNADLRLTEIG 453 Query: 241 RQLGCVGDAQWEMFEKKREAVAREMERLKSTWVNPRILAEAEAERVLGKAIDHEYSLFDL 300 R+LGCVGDAQWE F++KREAV+REMERLKSTWVNPRILA AEAERVLGKAI+ EY+L DL Sbjct: 454 RELGCVGDAQWEAFDRKREAVSREMERLKSTWVNPRILAAAEAERVLGKAIEREYNLLDL 513 Query: 301 LRRPNVTYDSLMTLAGADGQALAGPGVSDDPVREQIEIQIKYAGYIDRQAKEIGRQEHNE 360 LRRPNV+YDSLM L G +GQALAGPG+ D PVREQ+EIQ+KYAGYI RQA EI RQ+HNE Sbjct: 514 LRRPNVSYDSLMGLTGTEGQALAGPGIEDGPVREQVEIQVKYAGYIARQADEISRQDHNE 573 Query: 361 SLKLPADLDYMEVQALSIEVRQKLNKHKPETLGQASRISGVTPAALSLLLVHLKKGGLKN 420 +LKLPADLDYM+V+ALSIEVRQKLNKH+PETLGQASRISGVTPAALSLLLVHLKKGGLK Sbjct: 574 NLKLPADLDYMDVKALSIEVRQKLNKHRPETLGQASRISGVTPAALSLLLVHLKKGGLK- 632 Query: 421 VAEASANHNEAA 432 A+A N+AA Sbjct: 633 --PATATDNQAA 642 >ref|YP_004755049.1| tRNA uridine 5-carboxymethylaminomethyl modification protein gidA [Collimonas fungivorans Ter331] gb|AEK64226.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Collimonas fungivorans Ter331] Length = 641 Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/420 (88%), Positives = 394/420 (93%) Query: 2 LEEQPGDLDPIPVFSVMGNVGMHPQQMPCWITHTNTQTHDIIRAGLDRSPMYTGVIEGVG 61 ++EQPGDLDP+PVFSVMGN MHP Q+PCWITHTN QTHDIIRAGLDRSPMYTGVIEGVG Sbjct: 215 MQEQPGDLDPVPVFSVMGNASMHPAQLPCWITHTNQQTHDIIRAGLDRSPMYTGVIEGVG 274 Query: 62 PRYCPSIEDKIHRFAGKDSHQIYLEPEGLTTNEFYPNGISTSLPFDVQLALVRSMRGMEN 121 PRYCPSIEDKIHRFAGKDSHQI+LEPEGLTTNEFYPNGISTSLPFDVQLALV SMRG+EN Sbjct: 275 PRYCPSIEDKIHRFAGKDSHQIFLEPEGLTTNEFYPNGISTSLPFDVQLALVHSMRGLEN 334 Query: 122 AHILRPGYAIEYDYFDPRGLKSSLETRQIQGLFFAGQINGTTGYEEAAAQGMLAGLNAAL 181 AHILRPGYAIEYDYFDPR LK+SLET+ IQGL+FAGQINGTTGYEEAAAQGMLAGLNAAL Sbjct: 335 AHILRPGYAIEYDYFDPRALKASLETKSIQGLYFAGQINGTTGYEEAAAQGMLAGLNAAL 394 Query: 182 QTQGRDSWTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNADLRLTEIGR 241 QTQ RD+WTPRRDEAYLGVLVDDLITQGV EPYRMFTSRAEYRLSLREDNADLRLTEIGR Sbjct: 395 QTQERDAWTPRRDEAYLGVLVDDLITQGVQEPYRMFTSRAEYRLSLREDNADLRLTEIGR 454 Query: 242 QLGCVGDAQWEMFEKKREAVAREMERLKSTWVNPRILAEAEAERVLGKAIDHEYSLFDLL 301 QLGCVGDAQW FEKKREAVA EMERL+STWVNPRI+AEAEAER+LGKAI+ EYSL DLL Sbjct: 455 QLGCVGDAQWAQFEKKREAVALEMERLRSTWVNPRIVAEAEAERLLGKAIEREYSLVDLL 514 Query: 302 RRPNVTYDSLMTLAGADGQALAGPGVSDDPVREQIEIQIKYAGYIDRQAKEIGRQEHNES 361 RRPNV+YD LMTL G DGQ L GPGV DD V+EQ+EIQ+KYAGYIDRQAKE+ R EHNE+ Sbjct: 515 RRPNVSYDQLMTLKGLDGQDLGGPGVQDDTVKEQVEIQVKYAGYIDRQAKEVERHEHNEN 574 Query: 362 LKLPADLDYMEVQALSIEVRQKLNKHKPETLGQASRISGVTPAALSLLLVHLKKGGLKNV 421 LKLPADLDYM+VQALSIEVRQKLN H+PET GQASRISGVTPAALSLLLVHLKKGG+K + Sbjct: 575 LKLPADLDYMDVQALSIEVRQKLNLHRPETFGQASRISGVTPAALSLLLVHLKKGGMKRL 634 >ref|YP_001355329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Janthinobacterium sp. Marseille] sp|A6T482.1|MNMG_JANMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gb|ABR89240.1| glucose inhibited division protein A [Janthinobacterium sp. Marseille] Length = 645 Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/432 (83%), Positives = 400/432 (92%) Query: 1 VLEEQPGDLDPIPVFSVMGNVGMHPQQMPCWITHTNTQTHDIIRAGLDRSPMYTGVIEGV 60 V++EQPGDLDPIPVFSVMG+V MHP+QMPCWITHTN +THD+IR+GLDRSPMYTGVIEGV Sbjct: 214 VMQEQPGDLDPIPVFSVMGSVAMHPKQMPCWITHTNEKTHDLIRSGLDRSPMYTGVIEGV 273 Query: 61 GPRYCPSIEDKIHRFAGKDSHQIYLEPEGLTTNEFYPNGISTSLPFDVQLALVRSMRGME 120 GPRYCPSIEDKIHRFAGKDSHQI+LEPEGLTTNEFYPNGISTSLPFD+QLALV+SMRG+E Sbjct: 274 GPRYCPSIEDKIHRFAGKDSHQIFLEPEGLTTNEFYPNGISTSLPFDIQLALVQSMRGLE 333 Query: 121 NAHILRPGYAIEYDYFDPRGLKSSLETRQIQGLFFAGQINGTTGYEEAAAQGMLAGLNAA 180 +AHILRPGYAIEYDYFDPRGLKS+LET+ IQGLFFAGQINGTTGYEEAAAQGMLAG+NAA Sbjct: 334 HAHILRPGYAIEYDYFDPRGLKSTLETKVIQGLFFAGQINGTTGYEEAAAQGMLAGINAA 393 Query: 181 LQTQGRDSWTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNADLRLTEIG 240 LQTQ RD+WTPRRDEAYLGV+VDDLIT+GVLEPYRMFTSRAEYRLSLREDNAD+RLTEIG Sbjct: 394 LQTQERDAWTPRRDEAYLGVMVDDLITKGVLEPYRMFTSRAEYRLSLREDNADMRLTEIG 453 Query: 241 RQLGCVGDAQWEMFEKKREAVAREMERLKSTWVNPRILAEAEAERVLGKAIDHEYSLFDL 300 RQLGCVGDAQW +FE KREAVARE+ERL+STWV+PRILAEAEAERVLGK I+ EY+L DL Sbjct: 454 RQLGCVGDAQWAVFETKREAVARELERLRSTWVSPRILAEAEAERVLGKGIEREYALADL 513 Query: 301 LRRPNVTYDSLMTLAGADGQALAGPGVSDDPVREQIEIQIKYAGYIDRQAKEIGRQEHNE 360 LRRPNV+Y++LM+L G DGQ LAGPGV++D VREQ+EIQ+KYAGYIDRQAKE+ R ++ E Sbjct: 514 LRRPNVSYETLMSLKGVDGQDLAGPGVAEDAVREQVEIQLKYAGYIDRQAKEVERHDYYE 573 Query: 361 SLKLPADLDYMEVQALSIEVRQKLNKHKPETLGQASRISGVTPAALSLLLVHLKKGGLKN 420 +LKLP + DYMEV+ LS EVRQKL KHKPETLGQASRISGVTPAA+SLLLVHLKKGG K Sbjct: 574 NLKLPQEFDYMEVKGLSFEVRQKLCKHKPETLGQASRISGVTPAAISLLLVHLKKGGFKE 633 Query: 421 VAEASANHNEAA 432 A AA Sbjct: 634 FAALPPTSEAAA 645 >sp|A4GAI2.2|MNMG_HERAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A emb|CAL63519.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Herminiimonas arsenicoxydans] Length = 645 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/432 (81%), Positives = 395/432 (91%) Query: 1 VLEEQPGDLDPIPVFSVMGNVGMHPQQMPCWITHTNTQTHDIIRAGLDRSPMYTGVIEGV 60 V+ EQPGDLDPIPVFSVMG+V MHPQQMPCWITHTN +TH++IR GLDRSPMYTG+IEGV Sbjct: 214 VMTEQPGDLDPIPVFSVMGSVAMHPQQMPCWITHTNEKTHELIRGGLDRSPMYTGMIEGV 273 Query: 61 GPRYCPSIEDKIHRFAGKDSHQIYLEPEGLTTNEFYPNGISTSLPFDVQLALVRSMRGME 120 GPRYCPSIEDKIHRFAGK+SHQI+LEPEGLTTNE+YPNGISTSLPFDVQLALV+SMRG+E Sbjct: 274 GPRYCPSIEDKIHRFAGKESHQIFLEPEGLTTNEYYPNGISTSLPFDVQLALVQSMRGLE 333 Query: 121 NAHILRPGYAIEYDYFDPRGLKSSLETRQIQGLFFAGQINGTTGYEEAAAQGMLAGLNAA 180 +AHILRPGYAIEYDYFDPRGLK++LET+ IQGLFFAGQINGTTGYEEAAAQGMLAG+NAA Sbjct: 334 HAHILRPGYAIEYDYFDPRGLKATLETKVIQGLFFAGQINGTTGYEEAAAQGMLAGINAA 393 Query: 181 LQTQGRDSWTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNADLRLTEIG 240 LQ Q RD+WTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNAD+RLT++G Sbjct: 394 LQIQERDAWTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNADMRLTDVG 453 Query: 241 RQLGCVGDAQWEMFEKKREAVAREMERLKSTWVNPRILAEAEAERVLGKAIDHEYSLFDL 300 RQLGCVGD QW +FE KREAVARE+ERL+STWV+PRILAEAEAERVLGK I+ EY+L DL Sbjct: 454 RQLGCVGDVQWALFETKREAVARELERLRSTWVSPRILAEAEAERVLGKGIEREYALADL 513 Query: 301 LRRPNVTYDSLMTLAGADGQALAGPGVSDDPVREQIEIQIKYAGYIDRQAKEIGRQEHNE 360 LRRPNVTY++LM+L G DGQ L GPGV++ VREQ+EIQ+KYAGYIDRQA+E+ R +H E Sbjct: 514 LRRPNVTYETLMSLKGMDGQDLGGPGVAEPAVREQVEIQLKYAGYIDRQAREVERHDHYE 573 Query: 361 SLKLPADLDYMEVQALSIEVRQKLNKHKPETLGQASRISGVTPAALSLLLVHLKKGGLKN 420 +LKLPA+ DYM V+ LSIEVRQKL K +PETLGQASRISGVTPAA+SL+LVHLKKGG K Sbjct: 574 NLKLPAEFDYMAVKGLSIEVRQKLTKQRPETLGQASRISGVTPAAISLMLVHLKKGGFKE 633 Query: 421 VAEASANHNEAA 432 A N AA Sbjct: 634 FAALPPNTEAAA 645 >ref|YP_001101640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Herminiimonas arsenicoxydans] Length = 601 Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/432 (81%), Positives = 395/432 (91%) Query: 1 VLEEQPGDLDPIPVFSVMGNVGMHPQQMPCWITHTNTQTHDIIRAGLDRSPMYTGVIEGV 60 V+ EQPGDLDPIPVFSVMG+V MHPQQMPCWITHTN +TH++IR GLDRSPMYTG+IEGV Sbjct: 170 VMTEQPGDLDPIPVFSVMGSVAMHPQQMPCWITHTNEKTHELIRGGLDRSPMYTGMIEGV 229 Query: 61 GPRYCPSIEDKIHRFAGKDSHQIYLEPEGLTTNEFYPNGISTSLPFDVQLALVRSMRGME 120 GPRYCPSIEDKIHRFAGK+SHQI+LEPEGLTTNE+YPNGISTSLPFDVQLALV+SMRG+E Sbjct: 230 GPRYCPSIEDKIHRFAGKESHQIFLEPEGLTTNEYYPNGISTSLPFDVQLALVQSMRGLE 289 Query: 121 NAHILRPGYAIEYDYFDPRGLKSSLETRQIQGLFFAGQINGTTGYEEAAAQGMLAGLNAA 180 +AHILRPGYAIEYDYFDPRGLK++LET+ IQGLFFAGQINGTTGYEEAAAQGMLAG+NAA Sbjct: 290 HAHILRPGYAIEYDYFDPRGLKATLETKVIQGLFFAGQINGTTGYEEAAAQGMLAGINAA 349 Query: 181 LQTQGRDSWTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNADLRLTEIG 240 LQ Q RD+WTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNAD+RLT++G Sbjct: 350 LQIQERDAWTPRRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNADMRLTDVG 409 Query: 241 RQLGCVGDAQWEMFEKKREAVAREMERLKSTWVNPRILAEAEAERVLGKAIDHEYSLFDL 300 RQLGCVGD QW +FE KREAVARE+ERL+STWV+PRILAEAEAERVLGK I+ EY+L DL Sbjct: 410 RQLGCVGDVQWALFETKREAVARELERLRSTWVSPRILAEAEAERVLGKGIEREYALADL 469 Query: 301 LRRPNVTYDSLMTLAGADGQALAGPGVSDDPVREQIEIQIKYAGYIDRQAKEIGRQEHNE 360 LRRPNVTY++LM+L G DGQ L GPGV++ VREQ+EIQ+KYAGYIDRQA+E+ R +H E Sbjct: 470 LRRPNVTYETLMSLKGMDGQDLGGPGVAEPAVREQVEIQLKYAGYIDRQAREVERHDHYE 529 Query: 361 SLKLPADLDYMEVQALSIEVRQKLNKHKPETLGQASRISGVTPAALSLLLVHLKKGGLKN 420 +LKLPA+ DYM V+ LSIEVRQKL K +PETLGQASRISGVTPAA+SL+LVHLKKGG K Sbjct: 530 NLKLPAEFDYMAVKGLSIEVRQKLTKQRPETLGQASRISGVTPAAISLMLVHLKKGGFKE 589 Query: 421 VAEASANHNEAA 432 A N AA Sbjct: 590 FAALPPNTEAAA 601