BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0178.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778156.1| threonine efflux protein [Herbaspirillum ser... 281 5e-74 ref|YP_004755047.1| lysine exporter protein LysE/YggA [Collimona... 279 2e-73 ref|YP_004152386.1| lysine exporter protein LysE/YggA [Variovora... 162 4e-38 ref|YP_608875.1| amino acid transporter LysE [Pseudomonas entomo... 161 7e-38 ref|YP_001020500.1| amino acid transporter LysE [Methylibium pet... 160 9e-38 >ref|YP_003778156.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] gb|ADJ66248.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] Length = 210 Score = 281 bits (718), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 160/196 (81%), Positives = 180/196 (91%) Query: 1 MQALFHMIGITDVWQLIAATVVFLMLPGPGTFCVLTCSAKHGLRGGFAAIAGLMLGDIVL 60 MQALFH +GITD+WQLIAAT+VFL+LPGPGTFCVLTC+AK G+RGGFAA AGLMLGD+VL Sbjct: 1 MQALFHSLGITDIWQLIAATMVFLLLPGPGTFCVLTCAAKGGVRGGFAAQAGLMLGDVVL 60 Query: 61 MFLAAIGVAALLHANPLLFKGMQYVGAAYLAYLGARLLFAKEEGGSSVVPFSNMADFRRG 120 MFLAA GVAALLHANPLLF G+QY+GAAYLAYLGARLLFA+ EGG +VVPFSN A+FRRG Sbjct: 61 MFLAAAGVAALLHANPLLFHGLQYLGAAYLAYLGARLLFARGEGGGTVVPFSNAAEFRRG 120 Query: 121 FFVTLMNPKAIVFYMAFFPLFIDPATQQGAVTFLTMGAVICTCTLIYGSLLVLAGNAAAK 180 F VTL NPKAIVFYMAFFPLF+DPATQQGA+TF+TMGAVI CT +YGS+LV+ GNAAA+ Sbjct: 121 FLVTLFNPKAIVFYMAFFPLFLDPATQQGALTFITMGAVISCCTFLYGSVLVMVGNAAAR 180 Query: 181 RLARNRKIATLASRAA 196 R+ARNR IA LASRAA Sbjct: 181 RMARNRTIARLASRAA 196 >ref|YP_004755047.1| lysine exporter protein LysE/YggA [Collimonas fungivorans Ter331] gb|AEK64224.1| Lysine exporter protein (LYSE/YGGA) [Collimonas fungivorans Ter331] Length = 211 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 137/197 (69%), Positives = 166/197 (84%), Gaps = 1/197 (0%) Query: 1 MQALFHMIGITDVWQLIAATVVFLMLPGPGTFCVLTCSAKHGLRGGFAAIAGLMLGDIVL 60 M A FH +GITDVWQLI AT+VFL LPG GTFC+LT + + G+RGG+A++ G+MLGD VL Sbjct: 1 MSAFFHTLGITDVWQLIVATMVFLALPGAGTFCILTSAGREGVRGGYASLFGIMLGDAVL 60 Query: 61 MFLAAIGVAALLHANPLLFKGMQYVGAAYLAYLGARLLFAKE-EGGSSVVPFSNMADFRR 119 MFLAAIGVAALL ANP++FK +QY+GAAYLAYLG +LLFA++ EG S+ V F+ +++F R Sbjct: 61 MFLAAIGVAALLTANPMVFKAVQYLGAAYLAYLGCKLLFARKGEGASAAVGFTGVSNFTR 120 Query: 120 GFFVTLMNPKAIVFYMAFFPLFIDPATQQGAVTFLTMGAVICTCTLIYGSLLVLAGNAAA 179 GF VTL+NPKAIVFYMAFFPLFIDPATQ+G++TFLTM A+I +C L YGSLLVL GN AA Sbjct: 121 GFLVTLVNPKAIVFYMAFFPLFIDPATQRGSLTFLTMAAIISSCALFYGSLLVLLGNTAA 180 Query: 180 KRLARNRKIATLASRAA 196 KRL NR+IA ASRAA Sbjct: 181 KRLGHNRRIAAFASRAA 197 >ref|YP_004152386.1| lysine exporter protein LysE/YggA [Variovorax paradoxus EPS] gb|ADU34275.1| Lysine exporter protein (LYSE/YGGA) [Variovorax paradoxus EPS] Length = 204 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 84/183 (45%), Positives = 120/183 (65%), Gaps = 1/183 (0%) Query: 7 MIGITDVWQLIAATVVFLMLPGPGTFCVLTCSAKHGLRGGFAAIAGLMLGDIVLMFLAAI 66 M GI D + A ++FL++PGPG ++T ++K G+RGG AA GL++GD L++ A Sbjct: 1 MFGIADYGAFVVAIILFLLIPGPGNLALITSTSKGGIRGGLAATTGLIVGDQCLLWAAVA 60 Query: 67 GVAALLHANPLLFKGMQYVGAAYLAYLGARLLFAKEEGGSSVVPFSNMADFRRGFFVTLM 126 GV+A+L A P FK +Q++GAAYLA+LG ++L AK G + ++ FR+ F +TL+ Sbjct: 61 GVSAVLAAYPTAFKAVQWLGAAYLAWLGFKMLLAK-PGSAPILNIKPGHFFRQAFMITLL 119 Query: 127 NPKAIVFYMAFFPLFIDPATQQGAVTFLTMGAVICTCTLIYGSLLVLAGNAAAKRLARNR 186 NPKAIVFYMAFFPLF+DPA QG +TF M I T +YG L + A+R+ NR Sbjct: 120 NPKAIVFYMAFFPLFVDPARHQGLITFGAMAVTIAALTFLYGLTSTLLTHFLAERIRANR 179 Query: 187 KIA 189 +I+ Sbjct: 180 RIS 182 >ref|YP_608875.1| amino acid transporter LysE [Pseudomonas entomophila L48] emb|CAK16084.1| putative transporter, LysE family [Pseudomonas entomophila L48] Length = 205 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 87/190 (45%), Positives = 119/190 (62%) Query: 7 MIGITDVWQLIAATVVFLMLPGPGTFCVLTCSAKHGLRGGFAAIAGLMLGDIVLMFLAAI 66 M+G+TD + A ++ L +PGPG F ++T + K G++GG AA G++LGD VLM+L Sbjct: 1 MLGVTDYGAFVIAFLILLAIPGPGNFALITATGKGGVKGGLAATFGVILGDQVLMWLPVA 60 Query: 67 GVAALLHANPLLFKGMQYVGAAYLAYLGARLLFAKEEGGSSVVPFSNMADFRRGFFVTLM 126 GVA LL A P F +Q+ GAAYLA+LG R+L +K G S+ R+ +TL+ Sbjct: 61 GVATLLAAYPAAFHVVQWAGAAYLAWLGLRMLLSKPGSGPRQSSMSSGRYLRQTMMITLL 120 Query: 127 NPKAIVFYMAFFPLFIDPATQQGAVTFLTMGAVICTCTLIYGSLLVLAGNAAAKRLARNR 186 NPKAI+FYMAFFPLFIDP QG VTF M + TL+YG + VL + A+R+ N Sbjct: 121 NPKAIMFYMAFFPLFIDPVHHQGVVTFAFMALTVAGLTLLYGLIAVLLTHHLAERMRANP 180 Query: 187 KIATLASRAA 196 +I+ L R A Sbjct: 181 RISHLLERLA 190 >ref|YP_001020500.1| amino acid transporter LysE [Methylibium petroleiphilum PM1] gb|ABM94265.1| transporter, LysE family [Methylibium petroleiphilum PM1] Length = 201 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 88/187 (47%), Positives = 120/187 (64%), Gaps = 1/187 (0%) Query: 10 ITDVWQLIAATVVFLMLPGPGTFCVLTCSAKHGLRGGFAAIAGLMLGDIVLMFLAAIGVA 69 + D + +VFL +PGPG ++T + K GLRGGFAA G++ GD +LM+LA GVA Sbjct: 1 MADYGAFVVTVIVFLAIPGPGNLALITSTGKGGLRGGFAATLGVIAGDQLLMWLAVAGVA 60 Query: 70 ALLHANPLLFKGMQYVGAAYLAYLGARLLFAKEEGGSSVVPFSNMADFRRGFFVTLMNPK 129 ALL A P++F +Q+VGAAYLAY+G RL+ ++ G + V+ FR+ +TL+NPK Sbjct: 61 ALLQAAPVVFGAVQWVGAAYLAYIGWRLITSR-PGDAPVLQILPRHYFRQACMITLLNPK 119 Query: 130 AIVFYMAFFPLFIDPATQQGAVTFLTMGAVICTCTLIYGSLLVLAGNAAAKRLARNRKIA 189 AIVFYMAFFPLF+DPA QG TF M A I T +YG+++VL + A RL + +I Sbjct: 120 AIVFYMAFFPLFVDPARHQGLPTFGLMAATIAVLTFLYGAIVVLLTHRLADRLRASPRIT 179 Query: 190 TLASRAA 196 R A Sbjct: 180 KALERLA 186