BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0176.p (293 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778154.1| chromosome partitioning ParB protein [Herbas... 502 e-140 ref|YP_004755045.1| chromosome (plasmid) partitioning protein Pa... 470 e-130 ref|YP_001355325.1| ParB chromosome partitioning protein [Janthi... 466 e-129 ref|YP_001101636.1| chromosome partitioning protein [Herminiimon... 458 e-127 ref|ZP_08272544.1| Chromosome (plasmid) partitioning protein Par... 432 e-119 >ref|YP_003778154.1| chromosome partitioning ParB protein [Herbaspirillum seropedicae SmR1] gb|ADJ66246.1| chromosome partitioning ParB protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 261/304 (85%), Positives = 277/304 (91%), Gaps = 13/304 (4%) Query: 1 MAT--KKSKGLGRGLDALLGGSSDMTEDEPVVA---GSPSVMAVTELQAGKYQPRSRMDE 55 MAT KKSKGLGRGLDALLGGSSD+TE+ A G P+VM VTELQAGKYQPR+RMDE Sbjct: 1 MATLPKKSKGLGRGLDALLGGSSDITEEAQAQAAAQGLPTVMPVTELQAGKYQPRTRMDE 60 Query: 56 GALNELAASIKEQGLLQPILIRAIGQKNGKDIYEIIAGERRFRAAKIAGLTEVPVLVKNV 115 GALNELAASIKEQGLLQPILIRAIGQKNG+D YEIIAGERRFRAAKIAGLTEVPVLV+NV Sbjct: 61 GALNELAASIKEQGLLQPILIRAIGQKNGRDTYEIIAGERRFRAAKIAGLTEVPVLVRNV 120 Query: 116 DDQTTAAMALIENMQREDLNPLEEAQGIHRLITDFNFTHEQAAVAVGRSRSAVSNLLRLL 175 DDQTTAAMALIENMQREDLNPLEEAQGIHRLITDF FTHEQAA+AVGRSRSAVSNLLRLL Sbjct: 121 DDQTTAAMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAAIAVGRSRSAVSNLLRLL 180 Query: 176 NLAKPVQTMLMAGDIDMGHARALLAVDSATQITLANQIVAKRMSVREAEKLXSN------ 229 NLAKPVQTMLMAGDIDMGHARALL VDSATQI LANQIVAKRMSVR+AEKL + Sbjct: 181 NLAKPVQTMLMAGDIDMGHARALLVVDSATQIQLANQIVAKRMSVRDAEKLVTRASAEQA 240 Query: 230 -KPRDGGKEKSRDITRLEEELSDLLATQVSIKTGAKNRGQLIINFSDLDALDGVIARLRG 288 KPR+ GKEKSRDI RLEEELSDLLATQV+IKTGA+N+GQLII+F+DLDALDGVI RLRG Sbjct: 241 AKPRE-GKEKSRDIARLEEELSDLLATQVNIKTGARNKGQLIISFNDLDALDGVITRLRG 299 Query: 289 EAVE 292 E+VE Sbjct: 300 ESVE 303 >ref|YP_004755045.1| chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J [Collimonas fungivorans Ter331] gb|AEK64222.1| Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J [Collimonas fungivorans Ter331] Length = 298 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 237/296 (80%), Positives = 261/296 (88%), Gaps = 8/296 (2%) Query: 1 MATKKSKGLGRGLDALLGGSSDMTEDEPVVAGSPSVMAVTELQAGKYQPRSRMDEGALNE 60 M TKKSKGLGRGL+ALLGGS+D+TE P + G+PSV+AV+ +QAGKYQPR+RMDEGAL E Sbjct: 1 MVTKKSKGLGRGLEALLGGSTDITEAVPTIDGAPSVLAVSVMQAGKYQPRTRMDEGALAE 60 Query: 61 LAASIKEQGLLQPILIRAIGQKNGKDIYEIIAGERRFRAAKIAGLTEVPVLVKNVDDQTT 120 LAASIKEQGLLQPIL+R I NG YEIIAGERRFRAA++AGL EVPVLVK+VDDQTT Sbjct: 61 LAASIKEQGLLQPILVRPIALHNGAQHYEIIAGERRFRAAQLAGLIEVPVLVKDVDDQTT 120 Query: 121 AAMALIENMQREDLNPLEEAQGIHRLITDFNFTHEQAAVAVGRSRSAVSNLLRLLNLAKP 180 AAMALIENMQREDLNPLEEAQGIHRLITDF+FTHEQAAV+VGRSRSAVSNLLRLLNLAKP Sbjct: 121 AAMALIENMQREDLNPLEEAQGIHRLITDFSFTHEQAAVSVGRSRSAVSNLLRLLNLAKP 180 Query: 181 VQTMLMAGDIDMGHARALLAVDSATQITLANQIVAKRMSVREAEKLXSNKPRDG------ 234 VQTMLMAGDIDMGHARALLAVD+ATQITLA+Q+VAKRMSVR+ EKL + Sbjct: 181 VQTMLMAGDIDMGHARALLAVDAATQITLASQVVAKRMSVRDTEKLVVRATTEANGAGRP 240 Query: 235 --GKEKSRDITRLEEELSDLLATQVSIKTGAKNRGQLIINFSDLDALDGVIARLRG 288 KEKSRDI RLEEELSDLLATQV+IKT AKNRGQLII+FSDLD LDG+IARL+G Sbjct: 241 AKNKEKSRDIARLEEELSDLLATQVTIKTTAKNRGQLIIDFSDLDTLDGLIARLKG 296 >ref|YP_001355325.1| ParB chromosome partitioning protein [Janthinobacterium sp. Marseille] gb|ABR88823.1| ParB chromosome partitioning protein [Janthinobacterium sp. Marseille] Length = 299 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/296 (78%), Positives = 258/296 (87%), Gaps = 9/296 (3%) Query: 1 MATKKSKGLGRGLDALLGGSSDMTEDEPVVAGSPSVMAVTELQAGKYQPRSRMDEGALNE 60 M TKK KGLGRGL+ALLGG+SD E + G+PSV+ VT++QAGKYQPR+RMDEGALNE Sbjct: 1 MVTKKQKGLGRGLEALLGGASDFNEAIAAIPGAPSVLQVTDMQAGKYQPRTRMDEGALNE 60 Query: 61 LAASIKEQGLLQPILIRAIGQKNGKDIYEIIAGERRFRAAKIAGLTEVPVLVKNVDDQTT 120 LAASIK QGLLQ IL+R I N + YEIIAGERRFRAA++AGLTEVPVLVK VDD+ T Sbjct: 61 LAASIKAQGLLQAILVRPIASGNARQRYEIIAGERRFRAAQLAGLTEVPVLVKEVDDEAT 120 Query: 121 AAMALIENMQREDLNPLEEAQGIHRLITDFNFTHEQAAVAVGRSRSAVSNLLRLLNLAKP 180 AAMALIEN+QREDLNPLEEAQGIHRLI DFNFTHEQAA +VGRSRSAVSNLLRLLNLAKP Sbjct: 121 AAMALIENIQREDLNPLEEAQGIHRLIADFNFTHEQAANSVGRSRSAVSNLLRLLNLAKP 180 Query: 181 VQTMLMAGDIDMGHARALLAVDSATQITLANQIVAKRMSVREAEKLX---------SNKP 231 VQTMLMAGDIDMGHARALLAVD+ATQITLANQ+VAKRMSVREAEKL NKP Sbjct: 181 VQTMLMAGDIDMGHARALLAVDAATQITLANQVVAKRMSVREAEKLVVCSTLEQSGGNKP 240 Query: 232 RDGGKEKSRDITRLEEELSDLLATQVSIKTGAKNRGQLIINFSDLDALDGVIARLR 287 R GKEKSRDITRLEEELSDLLA+QV IK GAKN+GQL+++F+DLDALDG+IA+LR Sbjct: 241 RANGKEKSRDITRLEEELSDLLASQVEIKLGAKNKGQLVVDFADLDALDGIIAKLR 296 >ref|YP_001101636.1| chromosome partitioning protein [Herminiimonas arsenicoxydans] emb|CAL63515.1| Chromosome partitioning protein ParB [Herminiimonas arsenicoxydans] Length = 299 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/296 (77%), Positives = 254/296 (85%), Gaps = 9/296 (3%) Query: 1 MATKKSKGLGRGLDALLGGSSDMTEDEPVVAGSPSVMAVTELQAGKYQPRSRMDEGALNE 60 M TKK KGLGRGL+ALLGG++D E + G+PS + V+++QAGKYQPR+RMDEGALNE Sbjct: 1 MVTKKQKGLGRGLEALLGGATDFNEAVAAIPGAPSTLQVSDMQAGKYQPRTRMDEGALNE 60 Query: 61 LAASIKEQGLLQPILIRAIGQKNGKDIYEIIAGERRFRAAKIAGLTEVPVLVKNVDDQTT 120 LAASIK QGLLQ IL+R I NG+D YEIIAGERRFRAA++AGLTEVPVLVK VDD+ Sbjct: 61 LAASIKAQGLLQAILVRPIAAHNGRDRYEIIAGERRFRAAQLAGLTEVPVLVKEVDDEAA 120 Query: 121 AAMALIENMQREDLNPLEEAQGIHRLITDFNFTHEQAAVAVGRSRSAVSNLLRLLNLAKP 180 AAMALIEN+QREDLNPLEEAQGIHRLI DFNFTHEQAA AVGRSRSAVSNLLRLLNLAKP Sbjct: 121 AAMALIENIQREDLNPLEEAQGIHRLIADFNFTHEQAAHAVGRSRSAVSNLLRLLNLAKP 180 Query: 181 VQTMLMAGDIDMGHARALLAVDSATQITLANQIVAKRMSVREAEKL---------XSNKP 231 VQTMLMAGDIDMGHARALLAVD+ TQITLANQ+VAKRMSVREAEKL +KP Sbjct: 181 VQTMLMAGDIDMGHARALLAVDAGTQITLANQVVAKRMSVREAEKLVVRATLEQATGSKP 240 Query: 232 RDGGKEKSRDITRLEEELSDLLATQVSIKTGAKNRGQLIINFSDLDALDGVIARLR 287 R GKEKSRDI RLEEELSD LATQV+IK GAKN+GQL+I F+ LDALDG+IA+LR Sbjct: 241 RANGKEKSRDIARLEEELSDALATQVAIKLGAKNKGQLVIEFAGLDALDGIIAKLR 296 >ref|ZP_08272544.1| Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J [Oxalobacteraceae bacterium IMCC9480] gb|EGF33992.1| Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J [Oxalobacteraceae bacterium IMCC9480] Length = 297 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/297 (74%), Positives = 252/297 (84%), Gaps = 13/297 (4%) Query: 1 MATKKSK-GLGRGLDALLGGSSDMTEDEPVVAGSPSVMAVTELQAGKYQPRSRMDEGALN 59 M TKK K GLGRGL+ALLGGS+D P + G+P+V+ V +QAGKYQPR+RMDEGALN Sbjct: 1 MVTKKHKSGLGRGLEALLGGSTDFELAVPNLPGAPAVLPVVAMQAGKYQPRTRMDEGALN 60 Query: 60 ELAASIKEQGLLQPILIRAIGQKNGKDIYEIIAGERRFRAAKIAGLTEVPVLVKNVDDQT 119 ELAASIK QG+LQPIL+R I +G + YEIIAGERRFRAA+IAGL+EVPVLVK+VDDQ+ Sbjct: 61 ELAASIKAQGVLQPILVRPIVAHDGIERYEIIAGERRFRAAQIAGLSEVPVLVKDVDDQS 120 Query: 120 TAAMALIENMQREDLNPLEEAQGIHRLITDFNFTHEQAAVAVGRSRSAVSNLLRLLNLAK 179 AAMALIEN+QREDLNPLEEAQGIHRLI+DF FTHEQAA AVGRSRSAVSNLLRLLNLA+ Sbjct: 121 AAAMALIENIQREDLNPLEEAQGIHRLISDFEFTHEQAATAVGRSRSAVSNLLRLLNLAQ 180 Query: 180 PVQTMLMAGDIDMGHARALLAVDSATQITLANQIVAKRMSVREAEKLXSN---------K 230 PVQTMLMAGD+DMGHARALL VD+ATQITLANQIVAKRMSVR+AEKL + + Sbjct: 181 PVQTMLMAGDLDMGHARALLPVDAATQITLANQIVAKRMSVRDAEKLVTRTSSEQSADPQ 240 Query: 231 PRDGGKEKSRDITRLEEELSDLLATQVSIKTGAKNRGQLIINFSDLDALDGVIARLR 287 PR K KS DI RLEEELSD LAT V++K GA+NRGQL+I+F+ LDALDGVIARLR Sbjct: 241 PR---KAKSGDIARLEEELSDSLATTVTVKIGARNRGQLVIDFASLDALDGVIARLR 294