BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0175.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002947646.1| hypothetical protein Vapar_5791 [Variovorax ...   108   4e-22
ref|ZP_02886167.1| tautomerase [Burkholderia graminis C4D1M] >gi...   105   2e-21
ref|YP_003604831.1| hypothetical protein BC1002_1236 [Burkholder...   100   1e-19
ref|YP_004153828.1| hypothetical protein Varpa_1506 [Variovorax ...    98   5e-19
ref|ZP_04943087.1| hypothetical protein BCPG_04640 [Burkholderia...    98   5e-19

>ref|YP_002947646.1| hypothetical protein Vapar_5791 [Variovorax paradoxus S110]
 gb|ACS22380.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 131

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 61/75 (81%), Gaps = 1/75 (1%)

Query: 1  MPYLQLDVNDSYPAEQKKQLATRMAQTYADMMSVDVRRISIVIRECGAGSVWRTVDGGEV 60
          MPYLQLDVNDSYP + K+QLA RM +TYA MMSVD+RRIS+ IRE GAG++WR  + G+ 
Sbjct: 1  MPYLQLDVNDSYPEDLKQQLAARMCETYASMMSVDIRRISVAIRELGAGAIWRVAEAGKA 60

Query: 61 E-PVSVLMCDIRRGR 74
            PVS+LM DIRRGR
Sbjct: 61 PVPVSLLMLDIRRGR 75


>ref|ZP_02886167.1| tautomerase [Burkholderia graminis C4D1M]
 gb|EDT08295.1| tautomerase [Burkholderia graminis C4D1M]
          Length = 132

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 2/80 (2%)

Query: 1  MPYLQLDVNDSYPAEQKKQLATRMAQTYADMMSVDVRRISIVIRECGAGSVWRTVDGGEV 60
          MPYLQLDVN  YP+E K +LA  + +TYA MMSVD+RRIS+ +RECG G VWR +D G  
Sbjct: 1  MPYLQLDVNGQYPSEAKARLAQLLCETYASMMSVDIRRISVAVRECGDGGVWRMID-GRP 59

Query: 61 EPVSVLMCDIRRGRXRARLR 80
          +PV+VLMCDIRRGR  A LR
Sbjct: 60 QPVAVLMCDIRRGRS-AELR 78


>ref|YP_003604831.1| hypothetical protein BC1002_1236 [Burkholderia sp. CCGE1002]
 gb|ADG15320.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
          Length = 131

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 1/75 (1%)

Query: 1  MPYLQLDVNDSYPAEQKKQLATRMAQTYADMMSVDVRRISIVIRECGAGSVWRTV-DGGE 59
          MPYLQLDVND Y  E K+ LA +M++TYA MMSVDVRRIS+ IRE G GSVWR   + GE
Sbjct: 1  MPYLQLDVNDHYSVESKRLLAAKMSETYARMMSVDVRRISVAIRELGPGSVWRIAEESGE 60

Query: 60 VEPVSVLMCDIRRGR 74
            PV+++M DIRRGR
Sbjct: 61 PVPVALMMLDIRRGR 75


>ref|YP_004153828.1| hypothetical protein Varpa_1506 [Variovorax paradoxus EPS]
 gb|ADU35717.1| hypothetical protein Varpa_1506 [Variovorax paradoxus EPS]
          Length = 140

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 2/80 (2%)

Query: 1  MPYLQLDVNDSYPAEQKKQLATRMAQTYADMMSVDVRRISIVIRECGAGSVWRTVDGGEV 60
          MPYLQLDVN  +    KK+LA ++ +TYA +MSVD+RRIS+ IRE G G VWR VD GEV
Sbjct: 11 MPYLQLDVNGRHEVADKKRLARQLCETYAQLMSVDIRRISVAIREVGEGGVWRMVD-GEV 69

Query: 61 EPVSVLMCDIRRGRXRARLR 80
            VSVLMCDIRRGR  A LR
Sbjct: 70 VEVSVLMCDIRRGRS-AELR 88


>ref|ZP_04943087.1| hypothetical protein BCPG_04640 [Burkholderia cenocepacia PC184]
 gb|EAY66258.1| hypothetical protein BCPG_04640 [Burkholderia cenocepacia PC184]
          Length = 175

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 1/75 (1%)

Query: 1   MPYLQLDVNDSYPAEQKKQLATRMAQTYADMMSVDVRRISIVIRECGAGSVWRTVDGGEV 60
           MPYLQLDVND Y  E K+ LA +M++TYA MMSVD+RRIS+ IRE G G VWR  + GE 
Sbjct: 45  MPYLQLDVNDHYSVETKQLLAAKMSETYARMMSVDIRRISVAIRELGQGGVWRIAEVGEA 104

Query: 61  E-PVSVLMCDIRRGR 74
             PV+V+M DIRRGR
Sbjct: 105 PVPVAVMMLDIRRGR 119