BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0163.p (331 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778140.1| lipoate synthase [Herbaspirillum seropedicae... 644 0.0 ref|YP_001354942.1| lipoyl synthase [Janthinobacterium sp. Marse... 602 e-170 ref|YP_001101234.1| lipoyl synthase [Herminiimonas arsenicoxydan... 598 e-169 ref|YP_004754836.1| lipoate synthase [Collimonas fungivorans Ter... 592 e-167 ref|ZP_08274085.1| Lipoate synthase [Oxalobacteraceae bacterium ... 581 e-164 >ref|YP_003778140.1| lipoate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ66232.1| lipoate synthase protein [Herbaspirillum seropedicae SmR1] Length = 330 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 308/330 (93%), Positives = 316/330 (95%), Gaps = 8/330 (2%) Query: 8 MTTEITPAAPTLRNAT--------DKQKGAGKTAWIPIKIMPAEKLKKPDWIRVKAGSPT 59 MTTE+TPAA + NAT DKQKGAGKTAWIPIK++ AEKLKKPDWIRVKAGSPT Sbjct: 1 MTTELTPAADSSSNATGSARANPLDKQKGAGKTAWIPIKVVAAEKLKKPDWIRVKAGSPT 60 Query: 60 TRFYEIKDILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPD 119 TRFYEIKDILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPD Sbjct: 61 TRFYEIKDILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPD 120 Query: 120 PLDPNEPENLARTIAQLKLSYVVITSVDRDDLRDGGAGHFAACIQRVRELSPETRIEILT 179 PLDPNEPENLA+TIAQL+LSYVVITSVDRDDLRDGGA HFAACIQRVRELSPETRIEILT Sbjct: 121 PLDPNEPENLAKTIAQLRLSYVVITSVDRDDLRDGGAAHFAACIQRVRELSPETRIEILT 180 Query: 180 PDFRGRMDRALEILKMAPPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKDLHPNTP 239 PDFRGRMDRALEILKMAPPDVMNHNLETAPRLYKEARPGSDYEYSL+LLKRFKDLHP+ P Sbjct: 181 PDFRGRMDRALEILKMAPPDVMNHNLETAPRLYKEARPGSDYEYSLSLLKRFKDLHPDVP 240 Query: 240 TKSGIMVGLGETDEEVLQVMRDMRAHNVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEE 299 TKSGIMVGLGETDEEVLQVMRDMRAHNVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEE Sbjct: 241 TKSGIMVGLGETDEEVLQVMRDMRAHNVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEE 300 Query: 300 EAYKMGFVHAAVGAMVRSSYHADQQAHGLV 329 EAYKMGFVHAAVGAMVRSSYHADQQAHGLV Sbjct: 301 EAYKMGFVHAAVGAMVRSSYHADQQAHGLV 330 >ref|YP_001354942.1| lipoyl synthase [Janthinobacterium sp. Marseille] sp|A6T345.1|LIPA_JANMA RecName: Full=Lipoyl synthase; AltName: Full=Lip-syn; Short=LS; AltName: Full=Lipoate synthase; AltName: Full=Lipoic acid synthase; AltName: Full=Sulfur insertion protein lipA gb|ABR89574.1| lipoic acid synthetase [Janthinobacterium sp. Marseille] Length = 331 Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust. Identities = 285/323 (88%), Positives = 297/323 (91%) Query: 8 MTTEITPAAPTLRNATDKQKGAGKTAWIPIKIMPAEKLKKPDWIRVKAGSPTTRFYEIKD 67 MTTE PA N ++KQKGA KT IPIK++P E+L KPDWIRVKA SP+TRFYEIKD Sbjct: 1 MTTETNPAVTPAYNPSEKQKGAAKTIRIPIKVIPMERLPKPDWIRVKAASPSTRFYEIKD 60 Query: 68 ILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDPNEPE 127 ILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLD NEPE Sbjct: 61 ILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDVNEPE 120 Query: 128 NLARTIAQLKLSYVVITSVDRDDLRDGGAGHFAACIQRVRELSPETRIEILTPDFRGRMD 187 NLA+TIA L+L+YVVITSVDRDDLRDGGAGHFA CI+RVRELSP TRIEIL PDFRGRMD Sbjct: 121 NLAKTIAALRLNYVVITSVDRDDLRDGGAGHFAECIRRVRELSPNTRIEILVPDFRGRMD 180 Query: 188 RALEILKMAPPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKDLHPNTPTKSGIMVG 247 RALEIL APPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFK HPNTPTKSGIMVG Sbjct: 181 RALEILNAAPPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKAQHPNTPTKSGIMVG 240 Query: 248 LGETDEEVLQVMRDMRAHNVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEEEAYKMGFV 307 LGETDEEVLQVMRDMRAH+VDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEEEAYKMGF Sbjct: 241 LGETDEEVLQVMRDMRAHDVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEEEAYKMGFA 300 Query: 308 HAAVGAMVRSSYHADQQAHGLVG 330 HAAVGAMVRSSYHADQQAHG+ Sbjct: 301 HAAVGAMVRSSYHADQQAHGVTS 323 >ref|YP_001101234.1| lipoyl synthase [Herminiimonas arsenicoxydans] sp|A4G9C6.1|LIPA_HERAR RecName: Full=Lipoyl synthase; AltName: Full=Lip-syn; Short=LS; AltName: Full=Lipoate synthase; AltName: Full=Lipoic acid synthase; AltName: Full=Sulfur insertion protein lipA emb|CAL63113.1| Lipoic acid synthase (Lipoate synthase) (Lipoyl-acyl-carrier-protein synthase) (Sulfur insertion protein lipA) (Lip-syn) [Herminiimonas arsenicoxydans] Length = 335 Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust. Identities = 285/326 (87%), Positives = 300/326 (92%), Gaps = 1/326 (0%) Query: 5 ITTMTTEITPAAPTLRNATDKQKGAGKTAWIPIKIMPAEKLKKPDWIRVKAGSPTTRFYE 64 I T TP+AP N ++KQKG+ KT IPIK++P E+L KPDWIRVKAGSP+TRFYE Sbjct: 3 IDTNPESSTPSAPAY-NPSEKQKGSAKTIRIPIKVVPMERLPKPDWIRVKAGSPSTRFYE 61 Query: 65 IKDILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDPN 124 IKDILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLD N Sbjct: 62 IKDILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDVN 121 Query: 125 EPENLARTIAQLKLSYVVITSVDRDDLRDGGAGHFAACIQRVRELSPETRIEILTPDFRG 184 EPENLA+TIA L+L+YVVITSVDRDDLRDGGAGHFA CI+RVRELSP TRIEIL PDFRG Sbjct: 122 EPENLAKTIAALRLNYVVITSVDRDDLRDGGAGHFAECIRRVRELSPNTRIEILVPDFRG 181 Query: 185 RMDRALEILKMAPPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKDLHPNTPTKSGI 244 RMDRALEIL +APPDVMNHNLETAPRLYKEARPGSDY YSLNLLKRFK LHPNTPTKSGI Sbjct: 182 RMDRALEILNLAPPDVMNHNLETAPRLYKEARPGSDYAYSLNLLKRFKALHPNTPTKSGI 241 Query: 245 MVGLGETDEEVLQVMRDMRAHNVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEEEAYKM 304 MVGLGETDEEVLQVMRDMRAH+VDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEEEAYKM Sbjct: 242 MVGLGETDEEVLQVMRDMRAHDVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEEEAYKM 301 Query: 305 GFVHAAVGAMVRSSYHADQQAHGLVG 330 GF HAAVGAMVRSSYHADQQAHG+ Sbjct: 302 GFAHAAVGAMVRSSYHADQQAHGVTA 327 >ref|YP_004754836.1| lipoate synthase [Collimonas fungivorans Ter331] gb|AEK64013.1| Lipoate synthase [Collimonas fungivorans Ter331] Length = 335 Score = 592 bits (1525), Expect = e-167, Method: Compositional matrix adjust. Identities = 282/326 (86%), Positives = 297/326 (91%), Gaps = 7/326 (2%) Query: 8 MTTEITPAAPT-------LRNATDKQKGAGKTAWIPIKIMPAEKLKKPDWIRVKAGSPTT 60 MTTE TP+ P N ++KQKGA KTA IPIKI+P E+L+KPDWIRVKA P++ Sbjct: 1 MTTETTPSLPAETTVAAASYNPSEKQKGASKTARIPIKIIPIERLQKPDWIRVKAALPSS 60 Query: 61 RFYEIKDILRANNLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDP 120 RFYEIKDILRAN+LVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDP Sbjct: 61 RFYEIKDILRANSLVTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDP 120 Query: 121 LDPNEPENLARTIAQLKLSYVVITSVDRDDLRDGGAGHFAACIQRVRELSPETRIEILTP 180 LD NEPENLA+TIA LKL+YVVITSVDRDDLRDGGAGHFA CI+ VR LSP TRIEIL P Sbjct: 121 LDVNEPENLAKTIAALKLNYVVITSVDRDDLRDGGAGHFAECIRHVRALSPNTRIEILVP 180 Query: 181 DFRGRMDRALEILKMAPPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKDLHPNTPT 240 DFRGRMDRALEIL +APPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFK LHPNTPT Sbjct: 181 DFRGRMDRALEILNLAPPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKALHPNTPT 240 Query: 241 KSGIMVGLGETDEEVLQVMRDMRAHNVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEEE 300 KSGIMVGLGETDEEVLQVMRDMRAH+VDMLTIGQYLMPSG+HLPVRRYVHPD FKMYEEE Sbjct: 241 KSGIMVGLGETDEEVLQVMRDMRAHDVDMLTIGQYLMPSGNHLPVRRYVHPDVFKMYEEE 300 Query: 301 AYKMGFVHAAVGAMVRSSYHADQQAH 326 AYKMGF HAAVGAMVRSSYHADQQAH Sbjct: 301 AYKMGFAHAAVGAMVRSSYHADQQAH 326 >ref|ZP_08274085.1| Lipoate synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32430.1| Lipoate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 330 Score = 581 bits (1497), Expect = e-164, Method: Compositional matrix adjust. Identities = 273/313 (87%), Positives = 290/313 (92%) Query: 15 AAPTLRNATDKQKGAGKTAWIPIKIMPAEKLKKPDWIRVKAGSPTTRFYEIKDILRANNL 74 A P N DKQKGAGKTA IPIKI+ AE+L KPDWIRVK+ P++RF+EIKDILRAN L Sbjct: 9 ATPLYYNPLDKQKGAGKTARIPIKIVQAERLPKPDWIRVKSALPSSRFFEIKDILRANKL 68 Query: 75 VTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDPNEPENLARTIA 134 VTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLD +EPENLA+TIA Sbjct: 69 VTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPENLAKTIA 128 Query: 135 QLKLSYVVITSVDRDDLRDGGAGHFAACIQRVRELSPETRIEILTPDFRGRMDRALEILK 194 L+L+YVVITSVDRDDLRDGGAGHFA CI+R+R LSP TRIEIL PDFRGRMDRALEIL Sbjct: 129 ALRLNYVVITSVDRDDLRDGGAGHFAECIRRIRALSPSTRIEILVPDFRGRMDRALEILN 188 Query: 195 MAPPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKDLHPNTPTKSGIMVGLGETDEE 254 +APPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKDLHPNTPTKSGIMVGLGETDEE Sbjct: 189 LAPPDVMNHNLETAPRLYKEARPGSDYEYSLNLLKRFKDLHPNTPTKSGIMVGLGETDEE 248 Query: 255 VLQVMRDMRAHNVDMLTIGQYLMPSGDHLPVRRYVHPDTFKMYEEEAYKMGFVHAAVGAM 314 +LQVMRD+RAHNVDMLTIGQYL PSGDHLPVRRYVHPD FKM+E EAYKMGFVHAAVGAM Sbjct: 249 ILQVMRDLRAHNVDMLTIGQYLSPSGDHLPVRRYVHPDVFKMFEAEAYKMGFVHAAVGAM 308 Query: 315 VRSSYHADQQAHG 327 VRSSYHAD+QA G Sbjct: 309 VRSSYHADEQALG 321