BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0161.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_521594.1| short-chain dehydrogenase/reductase SDR [Rhodof... 349 3e-94 ref|YP_549168.1| short-chain dehydrogenase/reductase SDR [Polaro... 345 3e-93 ref|YP_002947410.1| short-chain dehydrogenase/reductase SDR [Var... 340 2e-91 ref|YP_002974723.1| short-chain dehydrogenase/reductase SDR [Rhi... 315 3e-84 ref|YP_002542445.1| short chain oxidoreductase protein [Agrobact... 290 2e-76 >ref|YP_521594.1| short-chain dehydrogenase/reductase SDR [Rhodoferax ferrireducens T118] gb|ABD68063.1| short-chain dehydrogenase/reductase SDR [Rhodoferax ferrireducens T118] Length = 266 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 175/258 (67%), Positives = 208/258 (80%) Query: 4 STRKIAVITGASSGIGAVYADRFAKRGYDLVLVARRADRLQALAATISTTHGVSVETLVA 63 S++K+A+ITGASSGIGAVYADR A RGYDL+LVARRADRL+AL IS HG+ E +VA Sbjct: 5 SSKKVALITGASSGIGAVYADRLAARGYDLILVARRADRLEALCTQISKAHGIKAEPVVA 64 Query: 64 DLATDDGQASVAQVLTTNPAVSVLVNNAGIARLAPIAGGALEDSTSQIALNITALTRLTH 123 DL D A + +L T+ V VLVNNAG+ARLAP A + D+ +QIALNITALTRLT Sbjct: 65 DLTKDQDVARIETILATHGDVHVLVNNAGVARLAPAAQTSANDALTQIALNITALTRLTQ 124 Query: 124 AALPGMKARNEGLIINISSALALHSLPISSVYSGTKAFVLSFSRGLQQELADTAVKVQVV 183 A +P ARN+GLIINI+SALA+HSLPIS++YSGTKAFVL +SRGLQQELA+T VKVQ+V Sbjct: 125 AVMPAFVARNQGLIINIASALAVHSLPISAIYSGTKAFVLQYSRGLQQELAETGVKVQLV 184 Query: 184 LPAATATEVWDQSGVPLSALNPDTVMPTEAMVDAALAALDQGESITLPAVADAGAIERFE 243 LPAATATE+WD SGVPL+ALN +T+M TE MVDAALA LDQGE IT P+VADA +++E Sbjct: 185 LPAATATELWDLSGVPLAALNKETLMTTEHMVDAALAGLDQGEMITWPSVADASLWDKYE 244 Query: 244 SARAALFAGTQTGKVAPR 261 +AR LFAGTQ G APR Sbjct: 245 AARTELFAGTQAGTPAPR 262 >ref|YP_549168.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] gb|ABE44270.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] Length = 266 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 170/258 (65%), Positives = 207/258 (80%) Query: 4 STRKIAVITGASSGIGAVYADRFAKRGYDLVLVARRADRLQALAATISTTHGVSVETLVA 63 S++KIA++TGASSGIGAVYADR A RGYDL+LVARRADRL AL A +S HG+ E +VA Sbjct: 5 SSKKIALVTGASSGIGAVYADRLAARGYDLILVARRADRLAALCAQVSKAHGIKAEPIVA 64 Query: 64 DLATDDGQASVAQVLTTNPAVSVLVNNAGIARLAPIAGGALEDSTSQIALNITALTRLTH 123 DL D+ A + +L+TN V VLVNNAGIARL P+A + D+ SQIALNITALTRLT Sbjct: 65 DLTKDEDLARIETILSTNEDVRVLVNNAGIARLGPLAQRSANDALSQIALNITALTRLTQ 124 Query: 124 AALPGMKARNEGLIINISSALALHSLPISSVYSGTKAFVLSFSRGLQQELADTAVKVQVV 183 A +P RN+G+IINI+S LA+HS+PIS+VYSGTKAFVL +SRGLQQELA+T VKVQ+V Sbjct: 125 AVVPAFIGRNQGVIINIASVLAIHSMPISAVYSGTKAFVLQYSRGLQQELAETGVKVQLV 184 Query: 184 LPAATATEVWDQSGVPLSALNPDTVMPTEAMVDAALAALDQGESITLPAVADAGAIERFE 243 LPA+TATE+WD SGVPL+ALN + +M TE MVDAALA DQGE+IT P+VADA +++E Sbjct: 185 LPASTATEIWDLSGVPLAALNKEALMTTEHMVDAALAGFDQGETITWPSVADASLWDKYE 244 Query: 244 SARAALFAGTQTGKVAPR 261 +AR+ LFA TQ G APR Sbjct: 245 AARSELFASTQVGTPAPR 262 >ref|YP_002947410.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] gb|ACS22144.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] Length = 266 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 168/258 (65%), Positives = 207/258 (80%) Query: 4 STRKIAVITGASSGIGAVYADRFAKRGYDLVLVARRADRLQALAATISTTHGVSVETLVA 63 S+RK+A++TGASSGIGAVYADR A RGYDL+LVARRADRL+AL A +S HG+ E +VA Sbjct: 5 SSRKVALVTGASSGIGAVYADRLAARGYDLILVARRADRLEALCAQVSKAHGIQAEAVVA 64 Query: 64 DLATDDGQASVAQVLTTNPAVSVLVNNAGIARLAPIAGGALEDSTSQIALNITALTRLTH 123 DL D+ A + +L+T + VLVNNAGIARL P+A + D+ SQIALNITALTRLT Sbjct: 65 DLTQDEDLARIETILSTRADLRVLVNNAGIARLGPVAQRSAGDALSQIALNITALTRLTQ 124 Query: 124 AALPGMKARNEGLIINISSALALHSLPISSVYSGTKAFVLSFSRGLQQELADTAVKVQVV 183 A +P ARN+G+IINI+S L +H+LPIS+VYSGTKAFVL +SRGLQ+ELA T VKVQ+V Sbjct: 125 AVVPAFIARNDGVIINIASVLGIHALPISAVYSGTKAFVLQYSRGLQEELAGTGVKVQLV 184 Query: 184 LPAATATEVWDQSGVPLSALNPDTVMPTEAMVDAALAALDQGESITLPAVADAGAIERFE 243 LPA+TATE+WD SGVPL+ALN D +M TE MVDAALA DQGE++T P+VADA +++E Sbjct: 185 LPASTATEIWDLSGVPLAALNKDALMTTEHMVDAALAGWDQGEAVTWPSVADATLWDKYE 244 Query: 244 SARAALFAGTQTGKVAPR 261 +AR+ALFA TQ G APR Sbjct: 245 AARSALFAATQVGTPAPR 262 >ref|YP_002974723.1| short-chain dehydrogenase/reductase SDR [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS55184.1| short-chain dehydrogenase/reductase SDR [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 266 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 155/262 (59%), Positives = 204/262 (77%), Gaps = 1/262 (0%) Query: 1 MSTSTRK-IAVITGASSGIGAVYADRFAKRGYDLVLVARRADRLQALAATISTTHGVSVE 59 MS S+ K +A++TGAS+GIGA+YA R A++GYDL+LVARRADRL+AL+ + HG VE Sbjct: 1 MSASSLKPVALVTGASAGIGAIYAARLAEKGYDLILVARRADRLKALSDKLGAAHGTKVE 60 Query: 60 TLVADLATDDGQASVAQVLTTNPAVSVLVNNAGIARLAPIAGGALEDSTSQIALNITALT 119 + ADL D V +VL N A+++LVNNAG + LAP+A ED+ + IALN+TALT Sbjct: 61 VVEADLTKDADVNRVEKVLKENSAITLLVNNAGNSTLAPVAKTTEEDAAAMIALNVTALT 120 Query: 120 RLTHAALPGMKARNEGLIINISSALALHSLPISSVYSGTKAFVLSFSRGLQQELADTAVK 179 RLTHA LP +RN G IIN++S L+ H+LPIS++YSGTK +V++FSRGLQQELA+T V+ Sbjct: 121 RLTHAVLPAFLSRNHGAIINVASVLSFHALPISAIYSGTKGYVMNFSRGLQQELAETNVR 180 Query: 180 VQVVLPAATATEVWDQSGVPLSALNPDTVMPTEAMVDAALAALDQGESITLPAVADAGAI 239 +Q+V+PAATATE+WD SGVPL++LN TVM +E +VDAALA D+GE ITLP+VADA Sbjct: 181 LQLVMPAATATELWDLSGVPLASLNQATVMTSENLVDAALAGFDKGEDITLPSVADASLW 240 Query: 240 ERFESARAALFAGTQTGKVAPR 261 ++F+ AR+ LFA TQTG+ APR Sbjct: 241 DKFDQARSTLFAATQTGEPAPR 262 >ref|YP_002542445.1| short chain oxidoreductase protein [Agrobacterium radiobacter K84] gb|ACM30848.1| short chain oxidoreductase protein [Agrobacterium radiobacter K84] Length = 272 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 150/261 (57%), Positives = 188/261 (72%) Query: 1 MSTSTRKIAVITGASSGIGAVYADRFAKRGYDLVLVARRADRLQALAATISTTHGVSVET 60 M+ S + +A+ITGASSGIGAVYA+R AKRGYDL+LVARR DRL A +S+ +G VE Sbjct: 1 MTNSEKPVALITGASSGIGAVYAERLAKRGYDLILVARRIDRLNKHATDLSSLYGSKVEI 60 Query: 61 LVADLATDDGQASVAQVLTTNPAVSVLVNNAGIARLAPIAGGALEDSTSQIALNITALTR 120 ADL + A V +L ++ +++LVNNAG +L A + +D+ S IALN+ ALTR Sbjct: 61 READLTAESDVADVENILRSDSRITLLVNNAGNGKLGKTADISHDDTMSTIALNVIALTR 120 Query: 121 LTHAALPGMKARNEGLIINISSALALHSLPISSVYSGTKAFVLSFSRGLQQELADTAVKV 180 LT AALP ARN G IINI+S +ALHSLPI+S+YS TKAFVLSFSRGLQ+ELA T VKV Sbjct: 121 LTRAALPHFVARNSGAIINIASVMALHSLPITSLYSATKAFVLSFSRGLQEELAGTGVKV 180 Query: 181 QVVLPAATATEVWDQSGVPLSALNPDTVMPTEAMVDAALAALDQGESITLPAVADAGAIE 240 Q VLPA TATE +DQ+G+PLSA +P+ VM T +VDAAL D+GE +TLP+V + Sbjct: 181 QTVLPAGTATEFYDQAGIPLSAFDPELVMTTTELVDAALTGFDKGELVTLPSVENLELWS 240 Query: 241 RFESARAALFAGTQTGKVAPR 261 F+ AR LFA TQ+GK A R Sbjct: 241 SFDIARNDLFAATQSGKPASR 261