BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0159.p (268 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_521330.1| short chain dehydrogenase [Ralstonia solanacear... 400 e-109 ref|YP_003747820.1| short chain dehydrogenase [Ralstonia solanac... 396 e-108 ref|YP_550254.1| short chain dehydrogenase [Polaromonas sp. JS66... 395 e-108 emb|CAQ36503.1| short-chain dehydrogenase/reductase sdr; protein... 394 e-108 ref|YP_004687727.1| short-chain dehydrogenase/reductase SDR [Cup... 390 e-107 >ref|NP_521330.1| short chain dehydrogenase [Ralstonia solanacearum GMI1000] emb|CAD16997.1| putative short-chain dehydrogenase/reductase sdr; oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 268 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 183/268 (68%), Positives = 227/268 (84%) Query: 1 MATSKVVLVTGVSSGIGRAAAEQFARQGCEVFGTVRNISTAAPLPGVTLIEMDVRNDDSV 60 M+ SKVVL+TGVSSGIGRA A +FA +GC VFGTVRN++ A P+PGV L+EMD+R+ SV Sbjct: 1 MSNSKVVLITGVSSGIGRATAAKFALRGCRVFGTVRNLAKAQPIPGVELVEMDIRDQASV 60 Query: 61 LHAIAEIVGAAGRIDVLVNNAGVNMIGAVEETNMTEAMSLFETNVFGIMRTLQAVLPHMR 120 I ++ A RIDVLVN+AGV ++GA EET++ EA +LF+TNVFGI+RT QA LPHMR Sbjct: 61 QQGIQTLIAQAKRIDVLVNSAGVTLLGATEETSIAEAQALFDTNVFGILRTTQAALPHMR 120 Query: 121 KQRSGRIVNVSSVLGFLPAPYMGLYSASKHAIEGLSETLDHEVRQFGIRVTLVEPAYTRT 180 QRSGRI+N+SSVLGFLPAPYMGLYSASKHA+EG+SETLDHEVR+FGIRV LVEP++T+T Sbjct: 121 AQRSGRIINISSVLGFLPAPYMGLYSASKHAVEGMSETLDHEVRKFGIRVVLVEPSFTKT 180 Query: 181 SLETNSPQAKSTLAAYDRERNIVAAAVARATNEAPEPYAVATTIVDAALGKWRMRRTPAG 240 SL+ N+P A S ++AYD ER++V+ A+ ++ +APEP VA+T+VDAALG W+MRRTP G Sbjct: 181 SLDINAPHAVSKVSAYDDERSVVSQAIQKSVQKAPEPDGVASTVVDAALGAWKMRRTPKG 240 Query: 241 QASLLGTLRRFLPAGPVDASLRKQFGLS 268 +ASLLG LRRF+PAGPVDASLRK FGLS Sbjct: 241 EASLLGKLRRFMPAGPVDASLRKTFGLS 268 >ref|YP_003747820.1| short chain dehydrogenase [Ralstonia solanacearum CFBP2957] emb|CBJ53413.1| short chain dehydrogenase [Ralstonia solanacearum CFBP2957] Length = 295 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 182/268 (67%), Positives = 226/268 (84%) Query: 1 MATSKVVLVTGVSSGIGRAAAEQFARQGCEVFGTVRNISTAAPLPGVTLIEMDVRNDDSV 60 M+ SKVV++TGVSSGIGRA A +FA +GC VFGTVRN++ A P+PGV L+EMD+R+ SV Sbjct: 28 MSNSKVVVITGVSSGIGRATAAKFALRGCRVFGTVRNLAKAQPVPGVELVEMDIRDQASV 87 Query: 61 LHAIAEIVGAAGRIDVLVNNAGVNMIGAVEETNMTEAMSLFETNVFGIMRTLQAVLPHMR 120 I I+ RIDVLVN+AGV ++GA EET++ EA +LF+TNVFGI+RT QAVLPHMR Sbjct: 88 QQGIQAIIAQTKRIDVLVNSAGVTLLGATEETSIAEAQALFDTNVFGILRTTQAVLPHMR 147 Query: 121 KQRSGRIVNVSSVLGFLPAPYMGLYSASKHAIEGLSETLDHEVRQFGIRVTLVEPAYTRT 180 QRSGRI+N+SSVLGFLPAPYMGLYSASKHA+EG+SETLDHEVR+FGIRV LVEP++T+T Sbjct: 148 VQRSGRIINISSVLGFLPAPYMGLYSASKHAVEGMSETLDHEVRKFGIRVVLVEPSFTKT 207 Query: 181 SLETNSPQAKSTLAAYDRERNIVAAAVARATNEAPEPYAVATTIVDAALGKWRMRRTPAG 240 SL+ N+P A S ++AYD ER++V+ A+ ++ +APEP VA+T+VDAALG W+MRRTP G Sbjct: 208 SLDINAPHAVSKVSAYDDERSVVSQAIQKSVQKAPEPDGVASTVVDAALGAWKMRRTPKG 267 Query: 241 QASLLGTLRRFLPAGPVDASLRKQFGLS 268 +ASLL LRRF+PAGPVDASLRK FGLS Sbjct: 268 EASLLSKLRRFMPAGPVDASLRKTFGLS 295 >ref|YP_550254.1| short chain dehydrogenase [Polaromonas sp. JS666] gb|ABE45356.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] Length = 268 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/253 (75%), Positives = 215/253 (84%) Query: 16 IGRAAAEQFARQGCEVFGTVRNISTAAPLPGVTLIEMDVRNDDSVLHAIAEIVGAAGRID 75 IGR AAE+FAR+GC+VFGTVR+I+ A P+ GV LIEMDVR+D SV AI I+ G ID Sbjct: 16 IGRVAAEKFARRGCQVFGTVRSIAKAKPMSGVELIEMDVRDDASVQRAIQSIIDQVGCID 75 Query: 76 VLVNNAGVNMIGAVEETNMTEAMSLFETNVFGIMRTLQAVLPHMRKQRSGRIVNVSSVLG 135 VLVNNAG+NMIGAVEET EA SLF+TNVFGI+RT QAVLPHMR Q GRIVNVSSVLG Sbjct: 76 VLVNNAGMNMIGAVEETTTGEAASLFDTNVFGILRTTQAVLPHMRAQHHGRIVNVSSVLG 135 Query: 136 FLPAPYMGLYSASKHAIEGLSETLDHEVRQFGIRVTLVEPAYTRTSLETNSPQAKSTLAA 195 FLPAPYMGLYSASKHA+EGLSETLDHEVRQFGIRVTLVEP+YT+T+LE +SPQAKS +A Sbjct: 136 FLPAPYMGLYSASKHAVEGLSETLDHEVRQFGIRVTLVEPSYTKTNLEASSPQAKSKIAD 195 Query: 196 YDRERNIVAAAVARATNEAPEPYAVATTIVDAALGKWRMRRTPAGQASLLGTLRRFLPAG 255 YDRER+IV+ +VA + N APEP VA TIV+AALG WRMRRTPAGQA LL LRRF+PAG Sbjct: 196 YDRERDIVSRSVADSVNGAPEPSEVANTIVEAALGTWRMRRTPAGQAFLLSKLRRFMPAG 255 Query: 256 PVDASLRKQFGLS 268 PVDASLRK GL+ Sbjct: 256 PVDASLRKMLGLA 268 >emb|CAQ36503.1| short-chain dehydrogenase/reductase sdr; protein [Ralstonia solanacearum MolK2] Length = 268 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 182/268 (67%), Positives = 224/268 (83%) Query: 1 MATSKVVLVTGVSSGIGRAAAEQFARQGCEVFGTVRNISTAAPLPGVTLIEMDVRNDDSV 60 M+ SKVV++TGVSSGIGRA A FA +GC VFGTVRN++ A P+PGV L+EMD+R+ SV Sbjct: 1 MSNSKVVVITGVSSGIGRATAAMFALRGCRVFGTVRNLAKAQPVPGVELVEMDIRDQASV 60 Query: 61 LHAIAEIVGAAGRIDVLVNNAGVNMIGAVEETNMTEAMSLFETNVFGIMRTLQAVLPHMR 120 I I+ RIDVLVN+AGV ++GA EET++ EA +LF+TNVFGI+RT QAVLPHMR Sbjct: 61 QQGIQTIIAQTKRIDVLVNSAGVTLLGATEETSIAEAQALFDTNVFGILRTTQAVLPHMR 120 Query: 121 KQRSGRIVNVSSVLGFLPAPYMGLYSASKHAIEGLSETLDHEVRQFGIRVTLVEPAYTRT 180 QRSGRI+N+SSVLGFLPAPYMGLYSASKHA+EG+SETLDHEVR+FGIRV LVEP++T+T Sbjct: 121 VQRSGRIINISSVLGFLPAPYMGLYSASKHAVEGMSETLDHEVRKFGIRVVLVEPSFTKT 180 Query: 181 SLETNSPQAKSTLAAYDRERNIVAAAVARATNEAPEPYAVATTIVDAALGKWRMRRTPAG 240 SL+ N+P A S ++AYD ER++V+ A+ ++ APEP VA+T+VDAALG W+MRRTP G Sbjct: 181 SLDINAPHAVSKVSAYDDERSVVSQAIQKSVQRAPEPDGVASTVVDAALGAWKMRRTPKG 240 Query: 241 QASLLGTLRRFLPAGPVDASLRKQFGLS 268 +ASLL LRRF+PAGPVDASLRK FGLS Sbjct: 241 EASLLSKLRRFMPAGPVDASLRKTFGLS 268 >ref|YP_004687727.1| short-chain dehydrogenase/reductase SDR [Cupriavidus necator N-1] gb|AEI81689.1| short-chain dehydrogenase/reductase SDR [Cupriavidus necator N-1] Length = 295 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/268 (68%), Positives = 222/268 (82%) Query: 1 MATSKVVLVTGVSSGIGRAAAEQFARQGCEVFGTVRNISTAAPLPGVTLIEMDVRNDDSV 60 ++ SKVV++TGVSSGIGRA A +FA+QG VFGTVRN + A P+ GV L+EMD+R++ SV Sbjct: 28 VSNSKVVVITGVSSGIGRATAAKFAQQGYRVFGTVRNSAKAQPISGVELVEMDIRDEASV 87 Query: 61 LHAIAEIVGAAGRIDVLVNNAGVNMIGAVEETNMTEAMSLFETNVFGIMRTLQAVLPHMR 120 H I I+ A RIDVLVN+AGV ++G+ EET++ EA SLF+TNVFGI+RT QAVLPHMR Sbjct: 88 QHGIQAIIAHAKRIDVLVNSAGVTLLGSTEETSIAEAQSLFDTNVFGILRTTQAVLPHMR 147 Query: 121 KQRSGRIVNVSSVLGFLPAPYMGLYSASKHAIEGLSETLDHEVRQFGIRVTLVEPAYTRT 180 QRSGRIVN+SSVLGFLPAPYMGLYSASKHA+EG+SETLDHEVR+FGIRV LVEP++T+T Sbjct: 148 AQRSGRIVNISSVLGFLPAPYMGLYSASKHAVEGMSETLDHEVRKFGIRVVLVEPSFTKT 207 Query: 181 SLETNSPQAKSTLAAYDRERNIVAAAVARATNEAPEPYAVATTIVDAALGKWRMRRTPAG 240 L+TN+P A S ++AYD ERNIV A+ + +AP+P VATTIVDAA+G W MRR P G Sbjct: 208 GLDTNAPHAASKISAYDDERNIVLQAIQKNVKDAPDPDGVATTIVDAAVGAWGMRRPPKG 267 Query: 241 QASLLGTLRRFLPAGPVDASLRKQFGLS 268 QA LL LRRF+PAGPVDASLRK FGLS Sbjct: 268 QAYLLSKLRRFMPAGPVDASLRKTFGLS 295