BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0154.p (250 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA85280.1| conserved membrane hypothetical protein [Ralston... 305 3e-81 ref|YP_004610707.1| hypothetical protein Mesop_2134 [Mesorhizobi... 289 3e-76 ref|ZP_07033293.1| protein of unknown function DUF1275 [Acidobac... 289 3e-76 ref|YP_004688517.1| hypothetical protein CNE_BB1p10710 [Cupriavi... 288 6e-76 ref|YP_586793.1| hypothetical protein Rmet_4662 [Cupriavidus met... 286 2e-75 >emb|CCA85280.1| conserved membrane hypothetical protein [Ralstonia syzygii R24] Length = 397 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 162/251 (64%), Positives = 193/251 (76%), Gaps = 2/251 (0%) Query: 1 MPVSYLRSLAGKNRTLAANRHLAFVLSAIAGAINAGGFLVVGQFTSHMSGILSMMAEDVA 60 MP+ YLR L GK R +NR LA L+ +AGA NAGGFL V Q+TSHMSGI+S MA+++A Sbjct: 15 MPILYLRKLTGKERNPRSNRQLACYLTFVAGATNAGGFLAVQQYTSHMSGIVSAMADNLA 74 Query: 61 IGAIGLLLSGAASMLFFIAGAASSAVLINWARKRRLEAEYAMPLIAEALLLLCFALLGGN 120 +G+ L+L ++L F+AGAA SAVLINWAR+ RL +EYA+PLI EA LL+CF LLG N Sbjct: 75 LGSFWLMLDSLGALLSFLAGAACSAVLINWARRERLHSEYALPLILEAALLVCFGLLGSN 134 Query: 121 ITGIEWLFVPVTVLLLCFIMGLQNAMITKLSRAEIRTTHVTGMVTDIGIELGKALYWNSN 180 + +EWLFVP TV++LCFIMGLQNAMITKLS AEIRTTHVTGMVTDIGIELGK YWN + Sbjct: 135 LKYLEWLFVPATVMVLCFIMGLQNAMITKLSNAEIRTTHVTGMVTDIGIELGKLFYWNLS 194 Query: 181 RHPDMH--VRADVAKLRTLTTLVALFFTGGVVGALGFRHIGFIFTLPLAATLIFVALVPV 238 R V A+ KLRTL TLVALFF GGV+GALGF+H+GF TL LA L+ +A +PV Sbjct: 195 RADSSKPLVLANRHKLRTLITLVALFFAGGVIGALGFKHVGFSATLALATLLLALAAIPV 254 Query: 239 LDDVRRALGRR 249 LDDVR L RR Sbjct: 255 LDDVRLHLWRR 265 >ref|YP_004610707.1| hypothetical protein Mesop_2134 [Mesorhizobium opportunistum WSM2075] gb|AEH86613.1| protein of unknown function DUF1275 [Mesorhizobium opportunistum WSM2075] Length = 252 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 2/242 (0%) Query: 3 VSYLRSLAGKNRTLAANRHLAFVLSAIAGAINAGGFLVVGQFTSHMSGILSMMAEDVAIG 62 + YLR L GK R+ +RHLA L+ IAGA N GGFL V Q+TSHMSGI+S MA+ +A+G Sbjct: 2 IVYLRRLTGKERSERTDRHLARFLTFIAGAANTGGFLAVQQYTSHMSGIVSSMADHLALG 61 Query: 63 AIGLLLSGAASMLFFIAGAASSAVLINWARKRRLEAEYAMPLIAEALLLLCFALLGGNIT 122 + L+LSG + L F+AGAA SAVL+NW R++ L++EYA PL+ EA+LL+CF LLG ++ Sbjct: 62 NVELVLSGLGAFLSFVAGAACSAVLVNWGRRQGLQSEYAFPLVLEAILLICFGLLGSHLA 121 Query: 123 GIEWLFVPVTVLLLCFIMGLQNAMITKLSRAEIRTTHVTGMVTDIGIELGKALYWN--SN 180 E LFVP+TV+LLCFIMGLQNA+ITKLS A IRTTHVTG+VTD+GIE+GK LYWN N Sbjct: 122 RHEALFVPMTVMLLCFIMGLQNAIITKLSEARIRTTHVTGLVTDMGIEIGKLLYWNISGN 181 Query: 181 RHPDMHVRADVAKLRTLTTLVALFFTGGVVGALGFRHIGFIFTLPLAATLIFVALVPVLD 240 + V+AD KLR L +LVALFF GGV+GA+GF+H+GF TL LAA L+ +A +PVL+ Sbjct: 182 DSDGLFVKADRRKLRLLASLVALFFIGGVIGAVGFKHVGFAATLFLAAILLVLATMPVLE 241 Query: 241 DV 242 DV Sbjct: 242 DV 243 >ref|ZP_07033293.1| protein of unknown function DUF1275 [Acidobacterium sp. MP5ACTX8] gb|EFI54139.1| protein of unknown function DUF1275 [Acidobacterium sp. MP5ACTX8] Length = 253 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 151/250 (60%), Positives = 194/250 (77%), Gaps = 2/250 (0%) Query: 1 MPVSYLRSLAGKNRTLAANRHLAFVLSAIAGAINAGGFLVVGQFTSHMSGILSMMAEDVA 60 MP+ YLR L GK+R A+R LA L+ IAGA NAGGFL V Q+TSHMSGI+S MA+++A Sbjct: 1 MPIIYLRGLTGKHRQQTADRQLARYLAFIAGATNAGGFLAVKQYTSHMSGIVSAMADNLA 60 Query: 61 IGAIGLLLSGAASMLFFIAGAASSAVLINWARKRRLEAEYAMPLIAEALLLLCFALLGGN 120 +G +GL+++ +++ F+AGA SA+LINW R+R +EYA+PL+ EALL++ F LLGGN Sbjct: 61 LGDVGLVMTALGALVSFMAGAGFSAILINWGRRREQHSEYALPLMLEALLMVAFGLLGGN 120 Query: 121 ITGIEWLFVPVTVLLLCFIMGLQNAMITKLSRAEIRTTHVTGMVTDIGIELGKALYWNSN 180 + EWLFVP +V+LLCFIMGLQNA+ITKLS AE+RTTHVTGMVTDIGIELGK YWN++ Sbjct: 121 LEHHEWLFVPASVMLLCFIMGLQNAIITKLSHAEVRTTHVTGMVTDIGIELGKLFYWNAS 180 Query: 181 RHPDMH--VRADVAKLRTLTTLVALFFTGGVVGALGFRHIGFIFTLPLAATLIFVALVPV 238 RH + VRAD KL L++LV LFF+GGVVGA+GF+ IGF TL LA L+ +A VP+ Sbjct: 181 RHDESKPMVRADRKKLWLLSSLVLLFFSGGVVGAIGFKRIGFSATLFLAVVLVILATVPL 240 Query: 239 LDDVRRALGR 248 +DD+R A R Sbjct: 241 IDDIRAAAAR 250 >ref|YP_004688517.1| hypothetical protein CNE_BB1p10710 [Cupriavidus necator N-1] gb|AEI82479.1| hypothetical membrane protein [Cupriavidus necator N-1] Length = 386 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 159/252 (63%), Positives = 193/252 (76%), Gaps = 4/252 (1%) Query: 1 MPVSYLRSLAGKNRTLAANRHLAFVLSAIAGAINAGGFLVVGQFTSHMSGILSMMAEDVA 60 MP+ YLR L GK R+ +NR LA L+ +AGA NAGGFL V Q+TSHMSGI+S MA+++A Sbjct: 1 MPILYLRKLTGKERSPDSNRQLACYLAFVAGATNAGGFLAVQQYTSHMSGIVSAMADNLA 60 Query: 61 IGAIGLLLSGAASMLFFIAGAASSAVLINWARKRRLEAEYAMPLIAEALLLLCFALLGGN 120 +G+ L+L G ++L F+AGAA SAVLINW R+ L +EYA+PL+ EA LL+CF LLG N Sbjct: 61 LGSFWLMLDGLGALLSFLAGAACSAVLINWGRREHLHSEYALPLMLEAALLVCFGLLGSN 120 Query: 121 ITGIEWLFVPVTVLLLCFIMGLQNAMITKLSRAEIRTTHVTGMVTDIGIELGKALYWNSN 180 + EWLFVP TV++LCFIMGLQNAMITKLS AEIRTTHVTGMVTDIGIELGK YWN + Sbjct: 121 LEHHEWLFVPATVMVLCFIMGLQNAMITKLSNAEIRTTHVTGMVTDIGIELGKLFYWNLS 180 Query: 181 RHPDMH---VRADVAKLRTLTTLVALFFTGGVVGALGFRHIGFIFTLPLAATLIFVALVP 237 R D+ V A+ KLR L TL+ALFF GG++GALGF+H+GF TL LA L+ +A VP Sbjct: 181 R-ADLSKPPVLANRHKLRVLITLIALFFAGGIIGALGFKHVGFSATLVLATLLLALAAVP 239 Query: 238 VLDDVRRALGRR 249 VLDDVR L RR Sbjct: 240 VLDDVRLHLWRR 251 >ref|YP_586793.1| hypothetical protein Rmet_4662 [Cupriavidus metallidurans CH34] gb|ABF11524.1| conserved hypothetical protein, putative membrane protein [Cupriavidus metallidurans CH34] Length = 386 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 155/251 (61%), Positives = 193/251 (76%), Gaps = 2/251 (0%) Query: 1 MPVSYLRSLAGKNRTLAANRHLAFVLSAIAGAINAGGFLVVGQFTSHMSGILSMMAEDVA 60 M + YLR L GK+R+ AN LA L+ +AGA NAGGFL V Q+TSHMSGILS MA+++A Sbjct: 1 MLIPYLRRLTGKDRSPEANLQLARYLAFVAGATNAGGFLAVQQYTSHMSGILSAMADNLA 60 Query: 61 IGAIGLLLSGAASMLFFIAGAASSAVLINWARKRRLEAEYAMPLIAEALLLLCFALLGGN 120 +G++GL+L G +++ F++GAA SAVLINW R+ +L++ +A+PL+ EA LL+ F LLGGN Sbjct: 61 LGSLGLVLDGLGALIAFLSGAACSAVLINWGRREQLQSTFALPLMVEAGLLVSFGLLGGN 120 Query: 121 ITGIEWLFVPVTVLLLCFIMGLQNAMITKLSRAEIRTTHVTGMVTDIGIELGKALYWNSN 180 + EWLFVP TVL+LCFIMGLQNAM+TK+S AEIRTTHVTGMVTDIGIELGK YWN + Sbjct: 121 LEHHEWLFVPATVLVLCFIMGLQNAMVTKVSNAEIRTTHVTGMVTDIGIELGKLFYWNLS 180 Query: 181 RHPDMH--VRADVAKLRTLTTLVALFFTGGVVGALGFRHIGFIFTLPLAATLIFVALVPV 238 R V A+ KLR L TLV LFF GGVVGALGF+HIGF TLPLA L+ +A VPV Sbjct: 181 RADSGKPVVLANRQKLRVLATLVGLFFVGGVVGALGFKHIGFSATLPLAILLLALAAVPV 240 Query: 239 LDDVRRALGRR 249 +DDVR + R+ Sbjct: 241 VDDVRLRMWRQ 251