BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0142.p         (68 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001099592.1| hypothetical protein HEAR1292 [Herminiimonas...   113   1e-23
ref|YP_004752046.1| hypothetical protein CFU_1391 [Collimonas fu...    80   7e-14

>ref|YP_001099592.1| hypothetical protein HEAR1292 [Herminiimonas arsenicoxydans]
 emb|CAL61465.1| hypothetical protein HEAR1292 [Herminiimonas arsenicoxydans]
          Length = 67

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/68 (82%), Positives = 61/68 (89%), Gaps = 1/68 (1%)

Query: 1  MDLVEKFDAKGKTGGAYHVEVYQTELEEADKAAPPGLKTYKLADGRALDPLSDAKFKIVQ 60
          MDLVEKFDAKGKTG AYHVEVYQT +E +D+ +P G KTY+L DGRALDPLSDAKFKIVQ
Sbjct: 1  MDLVEKFDAKGKTGAAYHVEVYQTPIETSDEGSP-GSKTYQLTDGRALDPLSDAKFKIVQ 59

Query: 61 TGEKIYRV 68
          TGEKIYRV
Sbjct: 60 TGEKIYRV 67


>ref|YP_004752046.1| hypothetical protein CFU_1391 [Collimonas fungivorans Ter331]
 gb|AEK61223.1| hypothetical protein CFU_1391 [Collimonas fungivorans Ter331]
          Length = 87

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 51/73 (69%), Gaps = 5/73 (6%)

Query: 1  MDLVEKFDAKGK-TGGAYHVEVYQTELEEADK----AAPPGLKTYKLADGRALDPLSDAK 55
          MDL EKFDAKGK TG AYHVE Y+  +E A      A+ PG + YKLADGRAL P ++ K
Sbjct: 15 MDLTEKFDAKGKETGNAYHVECYKDSIERAAANGTVASLPGREIYKLADGRALTPYAEGK 74

Query: 56 FKIVQTGEKIYRV 68
          F I QTGEKI RV
Sbjct: 75 FVIDQTGEKIVRV 87