BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0115.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08273385.1| Coproporphyrinogen III oxidase, oxygen-indepe... 479 e-133 ref|YP_001353317.1| oxygen-independent coproporphyrinogen III ox... 451 e-125 ref|YP_003776597.1| oxygen-independent coproporphyrinogen III ox... 450 e-124 ref|YP_001099932.1| coproporphyrinogen dehydrogenase [Herminiimo... 442 e-122 emb|CAL61807.2| Oxygen-independent coproporphyrinogen III oxidas... 442 e-122 >ref|ZP_08273385.1| Coproporphyrinogen III oxidase, oxygen-independent [Oxalobacteraceae bacterium IMCC9480] gb|EGF33150.1| Coproporphyrinogen III oxidase, oxygen-independent [Oxalobacteraceae bacterium IMCC9480] Length = 471 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/300 (76%), Positives = 257/300 (85%) Query: 24 VLRAQGFNRLSLGVQDFDPLVQRAVNRVQPEHLTLDIIKAARAQRYRSVSIDLIYGLPGQ 83 LR QGFNR+SLGVQDFDP VQ+AVNR+QPE TL II+AAR +RSVSIDLIYGLP Q Sbjct: 172 TLRGQGFNRISLGVQDFDPEVQKAVNRIQPESETLAIIQAARDANFRSVSIDLIYGLPKQ 231 Query: 84 NVISMAQTLGKVIQAAPDRISLYNYAHLPHLFKPQRRILDAQLPGAEAKLDMLSLAIRRL 143 NV++MAQTL KVI A PDRI++YNYAHLPH+FKPQRRI D LP E KLDML+L IRRL Sbjct: 232 NVMTMAQTLAKVIAANPDRIAIYNYAHLPHVFKPQRRISDTDLPAGETKLDMLALCIRRL 291 Query: 144 TDAGYVYIGMDHFALPTDDLAIAQQQGRLHRNFQGYSTHAESDMVSCGVSAISAVASTYS 203 T+AGYVYIGMDHFA PTDDLAIAQ QGRLHRNFQGYSTHAE D+VSCGVSAISAVA+TYS Sbjct: 292 TEAGYVYIGMDHFARPTDDLAIAQAQGRLHRNFQGYSTHAELDLVSCGVSAISAVAATYS 351 Query: 204 QNVKTLEDYYDAIDRNELPIVRGLRMNMDDVLRRLIIQRLMCNFELSIASIETAYPITFA 263 QNVKTL+ YY +D+NELPI RG+++ MDD+LRR IIQ LMCNFE+SIASIE AYPIT A Sbjct: 352 QNVKTLDAYYAHLDKNELPIARGIKLGMDDILRRAIIQTLMCNFEMSIASIEQAYPITVA 411 Query: 264 SYFAAELDGLRGLEQDGLVMIDDEWITVTMKGRLLVRNICMVFDRYLQSRPAEQRYSRTI 323 SYFAAEL L+ L QDGL+ IDDEWI+VT KGRLL+RNICMVFDRYL + P RYS+TI Sbjct: 412 SYFAAELVQLQTLAQDGLLTIDDEWISVTPKGRLLIRNICMVFDRYLNATPDPLRYSKTI 471 >ref|YP_001353317.1| oxygen-independent coproporphyrinogen III oxidase [Janthinobacterium sp. Marseille] gb|ABR88950.1| oxygen-independent coproporphyrinogen III oxidase [Janthinobacterium sp. Marseille] Length = 487 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 218/308 (70%), Positives = 256/308 (83%), Gaps = 9/308 (2%) Query: 25 LRAQGFNRLSLGVQDFDPLVQRAVNRVQPEHLTLDIIKAARAQRYRSVSIDLIYGLPGQN 84 LR QGFNR+SLGVQDFD VQ+AVNR+QPE T+ I+ AARA +RSVSIDLIYGLP QN Sbjct: 180 LRRQGFNRISLGVQDFDAEVQKAVNRIQPESETVAIMDAARAAGFRSVSIDLIYGLPKQN 239 Query: 85 VISMAQTLGKVIQAAPDRISLYNYAHLPHLFKPQRRILDAQLPGAEAKLDMLSLAIRRLT 144 + +M QTL KVI A PDRI++YNYAH+PHLFKPQRRI +A LP E KL+ML+L I+RL Sbjct: 240 LHTMEQTLEKVIAANPDRIAIYNYAHMPHLFKPQRRIAEADLPDGETKLEMLALCIQRLN 299 Query: 145 DAGYVYIGMDHFALPTDDLAIAQQQGRLHRNFQGYSTHAESDMVSCGVSAISAVASTYSQ 204 DAGY+YIGMDHFA P DDLAIAQ+QGRLHRNFQGYSTH +D+VSCGVSAISA+ +TYSQ Sbjct: 300 DAGYIYIGMDHFAKPGDDLAIAQRQGRLHRNFQGYSTHVGADLVSCGVSAISAIGATYSQ 359 Query: 205 NVKTLEDYYDAIDRNELPIVRGLRMNMDDVLRRLIIQRLMCNFELSIASIETAYPITFAS 264 NVKTL++YY+ I++NELPI RG+++NMDD+LRR+IIQ LMCNFELSIASIE AYPI F S Sbjct: 360 NVKTLDEYYEHIEQNELPIARGIKLNMDDLLRRIIIQMLMCNFELSIASIELAYPIVFNS 419 Query: 265 YFAAELDGLRGLEQDGLVMIDDEWITVTMKGRLLVRNICMVFDRYL----QSRPAEQ--- 317 YF AEL LR LEQ GL+ ID+EWITVT KGRLL+RNICMVFDRYL ++ A+ Sbjct: 420 YFEAELRKLRELEQSGLLSIDEEWITVTPKGRLLIRNICMVFDRYLDAARDTKAADGATQ 479 Query: 318 --RYSRTI 323 RYS+TI Sbjct: 480 PLRYSKTI 487 >ref|YP_003776597.1| oxygen-independent coproporphyrinogen III oxidase [Herbaspirillum seropedicae SmR1] gb|ADJ64689.1| oxygen-independent coproporphyrinogen III oxidase protein [Herbaspirillum seropedicae SmR1] Length = 483 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 215/308 (69%), Positives = 256/308 (83%), Gaps = 9/308 (2%) Query: 25 LRAQGFNRLSLGVQDFDPLVQRAVNRVQPEHLTLDIIKAARAQRYRSVSIDLIYGLPGQN 84 LR QGFNR+SLGVQDFDP VQ AVNRVQ E TL+II+AAR +RSVSIDLIYGLP QN Sbjct: 176 LRQQGFNRISLGVQDFDPEVQLAVNRVQSEEQTLEIIRAARDAGFRSVSIDLIYGLPKQN 235 Query: 85 VISMAQTLGKVIQAAPDRISLYNYAHLPHLFKPQRRILDAQLPGAEAKLDMLSLAIRRLT 144 V+SM++TL KVI A+PDRI++YNYAH+P LFK QR+I + LP A++KLDMLSL IR+LT Sbjct: 236 VMSMSRTLAKVIAASPDRIAVYNYAHMPQLFKTQRQIKEEDLPSADSKLDMLSLCIRQLT 295 Query: 145 DAGYVYIGMDHFALPTDDLAIAQQQGRLHRNFQGYSTHAESDMVSCGVSAISAVASTYSQ 204 AGYVYIGMDHFA PTDDLAIAQQQGRLHRNFQGYSTH+E+D+V+CGVSAISAV +YSQ Sbjct: 296 SAGYVYIGMDHFAKPTDDLAIAQQQGRLHRNFQGYSTHSETDLVACGVSAISAVGGSYSQ 355 Query: 205 NVKTLEDYYDAIDRNELPIVRGLRMNMDDVLRRLIIQRLMCNFELSIASIETAYPITFAS 264 N KTL+DYY ++ + LPI RG+++ MDDVLRRLIIQRLMCNFELSI S+E AYPI F Sbjct: 356 NEKTLDDYYARLENSTLPIARGIQLGMDDVLRRLIIQRLMCNFELSINSLEIAYPIVFRE 415 Query: 265 YFAAELDGLRGLEQDGLVMIDDEWITVTMKGRLLVRNICMVFDRYL---------QSRPA 315 YFA+E++ L+ LE+DGL+ I+ EWITV KGRLL+RNICMVFDRYL Q++ A Sbjct: 416 YFASEMEKLKQLEEDGLIKIEPEWITVEPKGRLLIRNICMVFDRYLNQEREKAASQNKDA 475 Query: 316 EQRYSRTI 323 QRYS+T+ Sbjct: 476 PQRYSQTV 483 >ref|YP_001099932.1| coproporphyrinogen dehydrogenase [Herminiimonas arsenicoxydans] Length = 465 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 207/288 (71%), Positives = 250/288 (86%) Query: 25 LRAQGFNRLSLGVQDFDPLVQRAVNRVQPEHLTLDIIKAARAQRYRSVSIDLIYGLPGQN 84 LR QGFNR+S+GVQDFDP VQ+AVNR+Q E TL+II+AAR +RSVSIDLIYGLP QN Sbjct: 154 LRKQGFNRISIGVQDFDPDVQQAVNRIQSEQDTLNIIRAAREACFRSVSIDLIYGLPKQN 213 Query: 85 VISMAQTLGKVIQAAPDRISLYNYAHLPHLFKPQRRILDAQLPGAEAKLDMLSLAIRRLT 144 VI+MAQTL KVI A+PDRI++YNY H P++FKPQRRI + LP +A+L+M SL IRRLT Sbjct: 214 VITMAQTLNKVINASPDRIAVYNYVHRPNMFKPQRRIDEDDLPSLDARLNMFSLCIRRLT 273 Query: 145 DAGYVYIGMDHFALPTDDLAIAQQQGRLHRNFQGYSTHAESDMVSCGVSAISAVASTYSQ 204 DAGYVYIGMDHFA P+DDLAIAQ+QGRLHRNFQGYS+HAE ++V+ GVS ISAVA+TYS+ Sbjct: 274 DAGYVYIGMDHFAKPSDDLAIAQRQGRLHRNFQGYSSHAEHNLVAFGVSGISAVAATYSE 333 Query: 205 NVKTLEDYYDAIDRNELPIVRGLRMNMDDVLRRLIIQRLMCNFELSIASIETAYPITFAS 264 N KTL++YY+ I++NELPIV G++++MDD+LRR+IIQ LMCNFELSI SIE AYPITF + Sbjct: 334 NAKTLDEYYERIEQNELPIVTGVKLSMDDLLRRIIIQMLMCNFELSIDSIELAYPITFKT 393 Query: 265 YFAAELDGLRGLEQDGLVMIDDEWITVTMKGRLLVRNICMVFDRYLQS 312 YFAAELD L LE +GLV +DDEWI+VT KGRLL+RN+CMVFDRYL + Sbjct: 394 YFAAELDKLHELEDNGLVTVDDEWISVTPKGRLLIRNVCMVFDRYLNT 441 >emb|CAL61807.2| Oxygen-independent coproporphyrinogen III oxidase (Coproporphyrinogenase) (Coprogen oxidase) [Herminiimonas arsenicoxydans] Length = 485 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 207/288 (71%), Positives = 250/288 (86%) Query: 25 LRAQGFNRLSLGVQDFDPLVQRAVNRVQPEHLTLDIIKAARAQRYRSVSIDLIYGLPGQN 84 LR QGFNR+S+GVQDFDP VQ+AVNR+Q E TL+II+AAR +RSVSIDLIYGLP QN Sbjct: 174 LRKQGFNRISIGVQDFDPDVQQAVNRIQSEQDTLNIIRAAREACFRSVSIDLIYGLPKQN 233 Query: 85 VISMAQTLGKVIQAAPDRISLYNYAHLPHLFKPQRRILDAQLPGAEAKLDMLSLAIRRLT 144 VI+MAQTL KVI A+PDRI++YNY H P++FKPQRRI + LP +A+L+M SL IRRLT Sbjct: 234 VITMAQTLNKVINASPDRIAVYNYVHRPNMFKPQRRIDEDDLPSLDARLNMFSLCIRRLT 293 Query: 145 DAGYVYIGMDHFALPTDDLAIAQQQGRLHRNFQGYSTHAESDMVSCGVSAISAVASTYSQ 204 DAGYVYIGMDHFA P+DDLAIAQ+QGRLHRNFQGYS+HAE ++V+ GVS ISAVA+TYS+ Sbjct: 294 DAGYVYIGMDHFAKPSDDLAIAQRQGRLHRNFQGYSSHAEHNLVAFGVSGISAVAATYSE 353 Query: 205 NVKTLEDYYDAIDRNELPIVRGLRMNMDDVLRRLIIQRLMCNFELSIASIETAYPITFAS 264 N KTL++YY+ I++NELPIV G++++MDD+LRR+IIQ LMCNFELSI SIE AYPITF + Sbjct: 354 NAKTLDEYYERIEQNELPIVTGVKLSMDDLLRRIIIQMLMCNFELSIDSIELAYPITFKT 413 Query: 265 YFAAELDGLRGLEQDGLVMIDDEWITVTMKGRLLVRNICMVFDRYLQS 312 YFAAELD L LE +GLV +DDEWI+VT KGRLL+RN+CMVFDRYL + Sbjct: 414 YFAAELDKLHELEDNGLVTVDDEWISVTPKGRLLIRNVCMVFDRYLNT 461