BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0103.p (201 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001099920.1| aerobic, anaerobic respiration, osmotic bala... 347 8e-94 ref|ZP_08273907.1| transcriptional regulator, Crp/Fnr family [Ox... 336 9e-91 ref|YP_001353329.1| Crp/FNR family transcriptional regulator [Ja... 336 1e-90 ref|YP_003776587.1| Crp/Fnr family transcription regulator [Herb... 305 3e-81 ref|YP_003775945.1| Crp/Fnr family transcription regulator [Herb... 261 3e-68 >ref|YP_001099920.1| aerobic, anaerobic respiration, osmotic balance transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61795.1| Transcriptional activator protein anr [Herminiimonas arsenicoxydans] Length = 251 Score = 347 bits (889), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 164/198 (82%), Positives = 180/198 (90%) Query: 1 VARGESLYRMDDPFRNLYAIRLGHFKTYQLNAGGEQQITGFQMAGELMGMDAISTDKHHC 60 V R LYRMDDPF NLYA+R+GHFKTYQ+NAGGEQQITGFQMAGEL+GMDAISTD+HHC Sbjct: 53 VPRDGYLYRMDDPFTNLYAVRIGHFKTYQVNAGGEQQITGFQMAGELLGMDAISTDRHHC 112 Query: 61 DVAALEDSEVCEIPFQRLEELFGVIPMLLRHFHRIMSQEITREQNAMLLLGNMRAEQRFA 120 D ALEDSEVCEIPF RLEELFG +P+LLRHFHR+MSQEITREQ+ MLLLGNMRAEQRFA Sbjct: 113 DAIALEDSEVCEIPFPRLEELFGSMPILLRHFHRMMSQEITREQSVMLLLGNMRAEQRFA 172 Query: 121 AFLINLSSRYAARGYSSTSFQLRMSREDIGNYLGLTIESISRLVSKFRKLGWLGVDKREI 180 AFL+NL+SRY ARGYSSTSFQLRMSREDIGNYLGLTIESISRL+SKF+K G L V REI Sbjct: 173 AFLVNLASRYVARGYSSTSFQLRMSREDIGNYLGLTIESISRLLSKFKKQGLLKVSNREI 232 Query: 181 QLLDPVRIKALAAGTETC 198 +LLD V +KA+AAGTETC Sbjct: 233 ELLDLVTLKAMAAGTETC 250 >ref|ZP_08273907.1| transcriptional regulator, Crp/Fnr family [Oxalobacteraceae bacterium IMCC9480] gb|EGF32622.1| transcriptional regulator, Crp/Fnr family [Oxalobacteraceae bacterium IMCC9480] Length = 254 Score = 336 bits (862), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 159/197 (80%), Positives = 176/197 (89%), Gaps = 1/197 (0%) Query: 5 ESLYRMDDPFRNLYAIRLGHFKTYQLNAGGEQQITGFQMAGELMGMDAISTDKHHCDVAA 64 E+LYRM+DPFRNLYAIR GHFKT+Q+N GG+ ITGFQMAGEL+GMDAIST++HHCD A Sbjct: 58 EALYRMEDPFRNLYAIRFGHFKTFQINPGGDTHITGFQMAGELLGMDAISTERHHCDAVA 117 Query: 65 LEDSEVCEIPFQRLEELFGVIPMLLRHFHRIMSQEITREQNAMLLLGNMRAEQRFAAFLI 124 LEDSEVCEIPF RLEELFG IP LL HFHRIMSQEI REQN MLLLGNMRAEQRFAAFL+ Sbjct: 118 LEDSEVCEIPFARLEELFGEIPRLLHHFHRIMSQEIMREQNVMLLLGNMRAEQRFAAFLV 177 Query: 125 NLSSRYAARGYSSTSFQLRMSREDIGNYLGLTIESISRLVSKFRKLGWLGVDKREIQLLD 184 NLSSRYA RGYS+TSFQLRMSREDIGNYLGLTIESISRL+S+F+K GWL VDKRE++LLD Sbjct: 178 NLSSRYATRGYSATSFQLRMSREDIGNYLGLTIESISRLLSRFKKQGWLEVDKREVRLLD 237 Query: 185 PVRIKALAAGTETC-PM 200 ++ALAAGT C PM Sbjct: 238 ATMLRALAAGTTHCTPM 254 >ref|YP_001353329.1| Crp/FNR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR90137.1| transcriptional regulator, Crp/Fnr family [Janthinobacterium sp. Marseille] Length = 252 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 159/198 (80%), Positives = 177/198 (89%) Query: 1 VARGESLYRMDDPFRNLYAIRLGHFKTYQLNAGGEQQITGFQMAGELMGMDAISTDKHHC 60 VAR + LYRM D F NLYA+R+GHFKT Q+NAGGEQQITGFQM GEL+GMDAISTD+HHC Sbjct: 54 VARDDYLYRMGDAFTNLYAVRVGHFKTCQINAGGEQQITGFQMTGELLGMDAISTDRHHC 113 Query: 61 DVAALEDSEVCEIPFQRLEELFGVIPMLLRHFHRIMSQEITREQNAMLLLGNMRAEQRFA 120 + ALEDSEVCEIPF RLEELFG +P LLRHFHR+MSQEITREQ+ MLLLGNMRAEQRFA Sbjct: 114 NAVALEDSEVCEIPFPRLEELFGTMPTLLRHFHRMMSQEITREQSVMLLLGNMRAEQRFA 173 Query: 121 AFLINLSSRYAARGYSSTSFQLRMSREDIGNYLGLTIESISRLVSKFRKLGWLGVDKREI 180 AFL+NL+SRY ARGYSSTSFQLRMSREDIGNYLGLTIESISRL+SKF+K G L V+ REI Sbjct: 174 AFLVNLASRYMARGYSSTSFQLRMSREDIGNYLGLTIESISRLLSKFKKQGLLKVNNREI 233 Query: 181 QLLDPVRIKALAAGTETC 198 +LLD +KA+AAGTETC Sbjct: 234 ELLDLTLLKAMAAGTETC 251 >ref|YP_003776587.1| Crp/Fnr family transcription regulator [Herbaspirillum seropedicae SmR1] gb|ADJ64679.1| Crp/Fnr family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 278 Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 142/198 (71%), Positives = 169/198 (85%) Query: 1 VARGESLYRMDDPFRNLYAIRLGHFKTYQLNAGGEQQITGFQMAGELMGMDAISTDKHHC 60 VAR + LYR+ D F LYA+R+GHFKTYQ N G++QITGFQM GEL+GMDAIST++H C Sbjct: 72 VARDDFLYRIGDRFTALYAVRVGHFKTYQENLDGDRQITGFQMPGELLGMDAISTEQHQC 131 Query: 61 DVAALEDSEVCEIPFQRLEELFGVIPMLLRHFHRIMSQEITREQNAMLLLGNMRAEQRFA 120 D AL+DSEVCEIPF RLE+LFG IP LLRHFHRIMS EIT EQN ++LLGNMRAEQRFA Sbjct: 132 DAVALQDSEVCEIPFARLEQLFGQIPHLLRHFHRIMSHEITSEQNVIMLLGNMRAEQRFA 191 Query: 121 AFLINLSSRYAARGYSSTSFQLRMSREDIGNYLGLTIESISRLVSKFRKLGWLGVDKREI 180 AFL+NLSSRYAARGYSST FQLRM+R+D+GNYLGLTIESISRL+SKFRK G L V++R++ Sbjct: 192 AFLVNLSSRYAARGYSSTRFQLRMTRQDVGNYLGLTIESISRLISKFRKQGLLAVEQRDV 251 Query: 181 QLLDPVRIKALAAGTETC 198 +++D +K LAAG + C Sbjct: 252 EVVDLAALKRLAAGVDAC 269 >ref|YP_003775945.1| Crp/Fnr family transcription regulator [Herbaspirillum seropedicae SmR1] gb|ADJ64037.1| Crp/Fnr family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 124/198 (62%), Positives = 155/198 (78%) Query: 1 VARGESLYRMDDPFRNLYAIRLGHFKTYQLNAGGEQQITGFQMAGELMGMDAISTDKHHC 60 V R E+LYR++D F LYAIRLGHFKT+Q N G QQITGFQMAGEL+GMDAI H C Sbjct: 57 VKRDETLYRLNDKFDMLYAIRLGHFKTFQHNPNGGQQITGFQMAGELLGMDAIGAGHHLC 116 Query: 61 DVAALEDSEVCEIPFQRLEELFGVIPMLLRHFHRIMSQEITREQNAMLLLGNMRAEQRFA 120 + ALEDSEVCEIPF LE+LF +P LLR FHR+MS EI+REQ ML LG+M A+Q+ A Sbjct: 117 EAVALEDSEVCEIPFASLEDLFRDMPTLLRQFHRMMSLEISREQRVMLTLGSMTAQQKMA 176 Query: 121 AFLINLSSRYAARGYSSTSFQLRMSREDIGNYLGLTIESISRLVSKFRKLGWLGVDKREI 180 AFL+NLSSRY +RGYSST FQLRM+RE+IGNYLGL +ES+SRL++ F+K G + V+ R++ Sbjct: 177 AFLLNLSSRYMSRGYSSTRFQLRMTREEIGNYLGLAVESVSRLLTNFKKSGVIEVNHRDV 236 Query: 181 QLLDPVRIKALAAGTETC 198 +L D ++A+A G + C Sbjct: 237 ELCDLPTLRAVALGNDPC 254