BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0093.p         (152 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004750892.1| hypothetical protein CFU_0231 [Collimonas fu...   197   6e-49
ref|YP_004154222.1| hypothetical protein Varpa_1901 [Variovorax ...   139   1e-31
ref|YP_002892999.1| hypothetical protein Tola_1804 [Tolumonas au...   129   2e-28
ref|YP_002943646.1| hypothetical protein Vapar_1730 [Variovorax ...   128   3e-28
ref|YP_003385318.1| hypothetical protein Slin_0455 [Spirosoma li...   128   3e-28

>ref|YP_004750892.1| hypothetical protein CFU_0231 [Collimonas fungivorans Ter331]
 gb|AEK60069.1| hypothetical protein CFU_0231 [Collimonas fungivorans Ter331]
          Length = 148

 Score =  197 bits (500), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 98/150 (65%), Positives = 112/150 (74%), Gaps = 2/150 (1%)

Query: 1   MFRKWMYLASAMACSMVIAQGAAAAPTADEQAVATAVEKLRVAMTSQIDRGALDALTEEQ 60
           MF+KWM+L +A+ CSM IA GAAAAP  DE+ VA  VE+LR AM    DR ALD L  ++
Sbjct: 1   MFKKWMHLCAAVICSMSIAHGAAAAP--DEERVAEQVEQLRAAMLHPGDRAALDRLALDE 58

Query: 61  LSYGHSNGVVQTKGEFIGQLASGESTFVKIDLTAQTVNVQENVAVVRHTLTAVTSDSGKP 120
           LSYGHSNG VQ K EFIG L SG S F  I L+ Q+V +  + AVVRHTL AVT+DSGKP
Sbjct: 59  LSYGHSNGKVQDKAEFIGALVSGASDFTSIALSDQSVKISGDTAVVRHTLVAVTNDSGKP 118

Query: 121 GNVALKILMVWKKTGGQWRLLARQAVRFAA 150
           GNV+LKILMVWKK  G WRLLARQAVRF A
Sbjct: 119 GNVSLKILMVWKKDSGHWRLLARQAVRFNA 148


>ref|YP_004154222.1| hypothetical protein Varpa_1901 [Variovorax paradoxus EPS]
 gb|ADU36111.1| hypothetical protein Varpa_1901 [Variovorax paradoxus EPS]
          Length = 151

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/154 (51%), Positives = 99/154 (64%), Gaps = 11/154 (7%)

Query: 1   MFRKWMYLASAMA-----CSMVIAQGAAAAPTADEQAVATAVEKLRVAMTSQIDRGALDA 55
           M  K ++L +A A     C+M+ A G A+    D+ +VA A E+LR+AM       AL A
Sbjct: 1   MLIKKLFLIAASAIVFTGCAMMPAGGGAS----DQASVAAAAERLRIAMVDPT-AAALGA 55

Query: 56  LTEEQLSYGHSNGVVQTKGEFIGQLASGESTFVKIDLTAQTVNVQE-NVAVVRHTLTAVT 114
           L  + LSYGHS G V TK  FI  L  G+S FV I +T QT+ V + N A+VRH+L A T
Sbjct: 56  LVADDLSYGHSGGKVDTKASFISDLLDGKSDFVTITITEQTIKVVDANTAIVRHSLAADT 115

Query: 115 SDSGKPGNVALKILMVWKKTGGQWRLLARQAVRF 148
           +DSGKPG VALKIL VW+K GG W+LLARQAVR 
Sbjct: 116 NDSGKPGKVALKILGVWQKQGGNWKLLARQAVRL 149


>ref|YP_002892999.1| hypothetical protein Tola_1804 [Tolumonas auensis DSM 9187]
 gb|ACQ93413.1| conserved hypothetical protein [Tolumonas auensis DSM 9187]
          Length = 145

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 93/151 (61%), Gaps = 11/151 (7%)

Query: 1   MFRKWMYLASAMACSMVIAQGAAAAPTADEQA--VATAVEKLRVAMTSQIDRGALDALTE 58
           MF+K       M C   I   A   P A+ Q   V +  E+LR+ M  +     L+ L  
Sbjct: 1   MFKK-------MLCVASICSAAWFVPVANAQNTDVVSTAEQLRIQMV-EPSENELNKLVL 52

Query: 59  EQLSYGHSNGVVQTKGEFIGQLASGESTFVKIDLTAQTVNVQENVAVVRHTLTAVTSDSG 118
           + LSYGHS+G + TK  FIG L  G+S FV +++T QT  V  + AV+RHTLTA T+DSG
Sbjct: 53  DDLSYGHSSGRLDTKESFIGDLMKGKSDFVTLNITDQTAKVTGDTAVIRHTLTATTNDSG 112

Query: 119 KPGNVALKILMVW-KKTGGQWRLLARQAVRF 148
           KPGNV+LK+L VW K+  G+W+LLARQAVR 
Sbjct: 113 KPGNVSLKVLQVWQKQAAGEWKLLARQAVRI 143


>ref|YP_002943646.1| hypothetical protein Vapar_1730 [Variovorax paradoxus S110]
 gb|ACS18380.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 149

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/97 (61%), Positives = 74/97 (76%)

Query: 52  ALDALTEEQLSYGHSNGVVQTKGEFIGQLASGESTFVKIDLTAQTVNVQENVAVVRHTLT 111
           AL AL  + LSYGHS+G V TK  FIG L +G+S FV I +T QT+ V  +VA+VRHTL 
Sbjct: 53  ALGALVADDLSYGHSSGKVDTKASFIGDLVAGKSDFVSITITDQTIKVAGDVAIVRHTLA 112

Query: 112 AVTSDSGKPGNVALKILMVWKKTGGQWRLLARQAVRF 148
           A T+DSGKPG VALKIL +W+K GG+W++LARQAVR 
Sbjct: 113 ADTNDSGKPGKVALKILGIWQKQGGEWKMLARQAVRI 149


>ref|YP_003385318.1| hypothetical protein Slin_0455 [Spirosoma linguale DSM 74]
 gb|ADB36519.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
          Length = 144

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 2   FRKWMYLASAMACSMVIAQGAAAAPTADEQAVATAVEKLRVAMTSQIDRGALDALTEEQL 61
            +K + +A    CS++   G A +   D+ AV  AV +LR  M    D+  L+AL  ++L
Sbjct: 1   MKKTILVALVTVCSLLSLNGNAQSK--DQAAVTQAVSQLRTLMIDP-DKAKLEALATDEL 57

Query: 62  SYGHSNGVVQTKGEFIGQLASGESTFVKIDLTAQTVNVQENVAVVRHTLTAVTSDSGKPG 121
           SYGHSNG ++ K EFI  L +G S F  IDLT QTV V +N A VRH L A T++ GKPG
Sbjct: 58  SYGHSNGKLEDKKEFIEALMNGSSDFKTIDLTDQTVTVVDNTAFVRHKLMAETANDGKPG 117

Query: 122 NVALKILMVWKKTGGQWRLLARQAVRF 148
              L +L+VW K  G W+LLARQAV+ 
Sbjct: 118 TAKLSVLLVWVKQKGSWKLLARQAVKI 144