BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0091.p         (167 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004750893.1| UDP-glucose 4-epimerase [Collimonas fungivor...   221   3e-56
ref|YP_004381409.1| NAD-dependent epimerase/dehydratase [Pseudom...   210   6e-53
ref|YP_004235092.1| NAD-dependent epimerase/dehydratase [Acidovo...   209   1e-52
ref|YP_349181.1| NAD-dependent epimerase/dehydratase [Pseudomona...   209   1e-52
ref|YP_003777982.1| nucleoside-diphosphate-sugar epimerase [Herb...   207   6e-52

>ref|YP_004750893.1| UDP-glucose 4-epimerase [Collimonas fungivorans Ter331]
 gb|AEK60070.1| UDP-glucose 4-epimerase [Collimonas fungivorans Ter331]
          Length = 279

 Score =  221 bits (563), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 99/131 (75%), Positives = 113/131 (86%)

Query: 35  GYYGLSKSYGEDMAQFNYDRYGIETVSIRIGWSFPEPKDRRSLASWLSYDDLTELMRCCL 94
           GYYGLSKSYGEDMAQ  +DRYGI+TVSIRIG SFP  KDRR+LA WLSYDDLTEL+RC L
Sbjct: 147 GYYGLSKSYGEDMAQLYFDRYGIQTVSIRIGNSFPTAKDRRALACWLSYDDLTELLRCSL 206

Query: 95  FTPDVGHTVVYGMSDNPSTWWDNHYAAHLGFKARDTSEIFRAKIEAQPLPPADDPVRVYQ 154
           FTP VGHTVVYGMSDN   WW+N +AAHLG+  RD+SE FRA +EAQPLP ADDP+R+YQ
Sbjct: 207 FTPQVGHTVVYGMSDNNGVWWNNRHAAHLGYTPRDSSEQFRAAVEAQPLPAADDPLRIYQ 266

Query: 155 GGIFTMTGPFE 165
           GG+FT+ GPF+
Sbjct: 267 GGMFTVAGPFD 277


>ref|YP_004381409.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina NK-01]
 gb|AEB59657.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina NK-01]
          Length = 275

 Score =  210 bits (534), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 93/130 (71%), Positives = 108/130 (83%)

Query: 35  GYYGLSKSYGEDMAQFNYDRYGIETVSIRIGWSFPEPKDRRSLASWLSYDDLTELMRCCL 94
           GYYGLSKSYGEDMA F +DRYGIETVSIRIG SFPEP +RR +++WLSYDDLT L+  CL
Sbjct: 143 GYYGLSKSYGEDMASFYFDRYGIETVSIRIGSSFPEPANRRMMSTWLSYDDLTHLLERCL 202

Query: 95  FTPDVGHTVVYGMSDNPSTWWDNHYAAHLGFKARDTSEIFRAKIEAQPLPPADDPVRVYQ 154
           + P+VGHTVVYGMS+N   WWDN  AAHLGFK +D+SE+FR K+EAQP+P ADDP R+YQ
Sbjct: 203 YAPNVGHTVVYGMSNNREVWWDNSQAAHLGFKPKDSSEMFRDKVEAQPMPAADDPARIYQ 262

Query: 155 GGIFTMTGPF 164
           GG F   GPF
Sbjct: 263 GGAFVAAGPF 272


>ref|YP_004235092.1| NAD-dependent epimerase/dehydratase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gb|ADX46525.1| NAD-dependent epimerase/dehydratase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 270

 Score =  209 bits (532), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/131 (73%), Positives = 110/131 (83%)

Query: 35  GYYGLSKSYGEDMAQFNYDRYGIETVSIRIGWSFPEPKDRRSLASWLSYDDLTELMRCCL 94
           GYYGLSKS+GEDMA F YDRYGIETVS+RIG SFPEP+DRR +++WLSYDDLT+L++  L
Sbjct: 139 GYYGLSKSFGEDMASFYYDRYGIETVSLRIGSSFPEPRDRRMMSTWLSYDDLTQLVQKAL 198

Query: 95  FTPDVGHTVVYGMSDNPSTWWDNHYAAHLGFKARDTSEIFRAKIEAQPLPPADDPVRVYQ 154
           FTPDVGHTVVYG S N   WWDNH A+HLG+  +D+SE FRAK+EAQP P ADDPV VYQ
Sbjct: 199 FTPDVGHTVVYGASANRDLWWDNHAASHLGYVPKDSSEPFRAKVEAQPAPAADDPVAVYQ 258

Query: 155 GGIFTMTGPFE 165
           GG FT  GPFE
Sbjct: 259 GGAFTAQGPFE 269


>ref|YP_349181.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens Pf0-1]
 gb|ABA75190.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 274

 Score =  209 bits (531), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 91/130 (70%), Positives = 110/130 (84%)

Query: 35  GYYGLSKSYGEDMAQFNYDRYGIETVSIRIGWSFPEPKDRRSLASWLSYDDLTELMRCCL 94
           GYYGLSKSYGEDMA F +DRYGIETVSIRIG SFPEP++RR + +WLS+DDLT+L+   L
Sbjct: 143 GYYGLSKSYGEDMASFYFDRYGIETVSIRIGSSFPEPQNRRMMHTWLSFDDLTQLLERSL 202

Query: 95  FTPDVGHTVVYGMSDNPSTWWDNHYAAHLGFKARDTSEIFRAKIEAQPLPPADDPVRVYQ 154
           +TP+VGHTVVYGMS N   WWDN +A+HLGF+A+DTSE+FR K+EAQP+P +DDP R+YQ
Sbjct: 203 YTPNVGHTVVYGMSANKDVWWDNRFASHLGFEAKDTSEVFRDKVEAQPVPASDDPARIYQ 262

Query: 155 GGIFTMTGPF 164
           GG F   GPF
Sbjct: 263 GGAFVAAGPF 272


>ref|YP_003777982.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ66074.1| nucleoside-diphosphate-sugar epimerase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 284

 Score =  207 bits (526), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 106/132 (80%)

Query: 35  GYYGLSKSYGEDMAQFNYDRYGIETVSIRIGWSFPEPKDRRSLASWLSYDDLTELMRCCL 94
           GYYGLSKSYGEDMAQF +DRYG+ETVSIRIG  FPE  +RR LASW+S DD  +L+R  L
Sbjct: 150 GYYGLSKSYGEDMAQFYFDRYGVETVSIRIGSIFPEATNRRMLASWMSMDDFEQLLRRSL 209

Query: 95  FTPDVGHTVVYGMSDNPSTWWDNHYAAHLGFKARDTSEIFRAKIEAQPLPPADDPVRVYQ 154
           F PDVGHT+VYGMS N  TWWDN YAAHLG+  +D+SEIFRAK+EAQP+P  DDPV   Q
Sbjct: 210 FIPDVGHTIVYGMSANAKTWWDNRYAAHLGYAPKDSSEIFRAKVEAQPMPAPDDPVLTLQ 269

Query: 155 GGIFTMTGPFEP 166
           GG FT  GPF+P
Sbjct: 270 GGAFTTAGPFDP 281