BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0081.p         (219 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002537435.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|YP_004236919.1| peptidase S24/S26A/S26B, conserved region [A...   100   2e-19
ref|YP_972860.1| putative phage repressor [Acidovorax citrulli A...    99   5e-19
ref|YP_001063360.1| peptidase [Burkholderia pseudomallei 668] >g...    94   1e-17
ref|ZP_02494567.1| helix-turn-helix motif:Peptidase S24, S26A an...    94   1e-17

>ref|XP_002537435.1| conserved hypothetical protein [Ricinus communis]
 gb|EEF24949.1| conserved hypothetical protein [Ricinus communis]
          Length = 295

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 2/152 (1%)

Query: 61  AVGEMAPPYLVRQTSKTEADDAVT-IRQVVLKLTAGSSSTGRQEIAPTLCQWKFPKSWLK 119
           A+  + P   +R T   + D   T I +V L+LTAG S    +           P  W++
Sbjct: 87  ALEGLKPGSFMRITEAGQGDQRFTLIPKVRLRLTAGISGYDVEPEPFDGTTAALPTGWIE 146

Query: 120 AHGLRADELFAVAVTGAGMAPRLHEGDVVVVNSGDTALQDGAVYLINYRGEAIIKRLALD 179
            HG    +L ++ V G  M   L+EGD+VVVN+ D  L DGAVY INY GE ++KRL  D
Sbjct: 147 RHGYDRSKLISIVVRGESMETTLYEGDLVVVNTADQKLIDGAVYAINYEGEPVVKRLTRD 206

Query: 180 LGRWFMTSDNSAGKRYPRLEFDQPDCILLGRV 211
            G+W++TSDN   +RY R   D+   I +GRV
Sbjct: 207 AGQWWLTSDNPDQRRYYRRTCDETTKI-IGRV 237


>ref|YP_004236919.1| peptidase S24/S26A/S26B, conserved region [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gb|ADX48352.1| Peptidase S24/S26A/S26B, conserved region [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 231

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 65/104 (62%)

Query: 113 FPKSWLKAHGLRADELFAVAVTGAGMAPRLHEGDVVVVNSGDTALQDGAVYLINYRGEAI 172
           F + WL+  G     L A+ V G GM P +  GD+VVVN+ DT L+DG V+ IN  GE +
Sbjct: 125 FHRHWLERRGYMPQCLLAIRVRGCGMEPSIQAGDIVVVNTSDTTLRDGQVFAINGFGEVL 184

Query: 173 IKRLALDLGRWFMTSDNSAGKRYPRLEFDQPDCILLGRVIVLAS 216
           ++R+  D GRW+++ DN    RYPR  + +PDCI +GR++   S
Sbjct: 185 LRRVQRDGGRWWLSCDNPDQARYPRKAWAEPDCIPIGRLVFKQS 228


>ref|YP_972860.1| putative phage repressor [Acidovorax citrulli AAC00-1]
 gb|ABM35086.1| putative phage repressor [Acidovorax citrulli AAC00-1]
          Length = 231

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 64/104 (61%)

Query: 113 FPKSWLKAHGLRADELFAVAVTGAGMAPRLHEGDVVVVNSGDTALQDGAVYLINYRGEAI 172
           F + WL+  G     L A+ V G GM P +  GD+VVVN+ DT L+DG V+ IN  GE +
Sbjct: 125 FHRQWLERRGYIPQCLLAIRVRGCGMEPSIQAGDIVVVNTSDTTLRDGQVFAINGFGEVL 184

Query: 173 IKRLALDLGRWFMTSDNSAGKRYPRLEFDQPDCILLGRVIVLAS 216
           ++R   D GRW+++ DN    RYPR  + +PDCI +GR++   S
Sbjct: 185 LRRAQRDDGRWWISCDNPDQARYPRKAWAEPDCIPIGRLVFKQS 228


>ref|YP_001063360.1| peptidase [Burkholderia pseudomallei 668]
 gb|ABN87079.1| helix-turn-helix motif:Peptidase S24, S26A and S26B [Burkholderia
           pseudomallei 668]
          Length = 222

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 8/160 (5%)

Query: 63  GEMAPPYLVRQTSKTEADDAVTIRQVVLKLTAGSSSTGRQEIAPTLCQWKFPKSWLKAHG 122
           G M P  L ++ S  E  +   IR+V +K++AG +  G + +        F +SW +++G
Sbjct: 68  GRMKPATL-QEISLQENPEYPAIRRVKIKISAGITGYGIEPLEEDHAPIVFHRSWYESNG 126

Query: 123 LRADELFAVAVTGAGMAPRLHEGDVVVVNSGDTALQDGAVYLINYRGEAIIKRLALDLGR 182
              ++L A+ V GA M P L++GD VVVNS DT+ +DG  + +++ GE +IKRL    G 
Sbjct: 127 YDPEKLLAIKVAGASMEPGLYDGDWVVVNSADTSPRDGVAFALSFDGEVVIKRLFRTEGH 186

Query: 183 WFMTSDNSAGKRYPRLEFDQP---DCILLGRVIVLASARF 219
           W   SDN   + Y     D+P   D  ++GRVI   S R 
Sbjct: 187 WVAASDNQDKRIY----RDRPLNGDTFIIGRVIHKQSERI 222


>ref|ZP_02494567.1| helix-turn-helix motif:Peptidase S24, S26A and S26B [Burkholderia
           pseudomallei NCTC 13177]
          Length = 153

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 7/155 (4%)

Query: 68  PYLVRQTSKTEADDAVTIRQVVLKLTAGSSSTGRQEIAPTLCQWKFPKSWLKAHGLRADE 127
           P  +++ S  E  +   IR+V +K++AG +  G + +        F +SW +++G   ++
Sbjct: 3   PATLQEISLQENPEYPAIRRVKIKISAGITGYGIEPLEEDHAPIVFHRSWYESNGYDPEK 62

Query: 128 LFAVAVTGAGMAPRLHEGDVVVVNSGDTALQDGAVYLINYRGEAIIKRLALDLGRWFMTS 187
           L A+ V GA M P L++GD VVVNS DT+ +DG  + +++ GE +IKRL    G W   S
Sbjct: 63  LLAIKVAGASMEPGLYDGDWVVVNSADTSPRDGVAFALSFDGEVVIKRLFRTDGHWVAAS 122

Query: 188 DNSAGKRYPRLEFDQP---DCILLGRVIVLASARF 219
           DN   + Y     D+P   D  ++GRVI   S R 
Sbjct: 123 DNQDKRIY----RDRPLNGDTFIIGRVIHKQSERI 153