BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0078.p         (157 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004213213.1| hypothetical protein Rahaq_2479 [Rahnella sp...   142   2e-32
ref|YP_004039622.1| hypothetical protein MPQ_1222 [Methylovorus ...   141   4e-32
ref|YP_003050934.1| hypothetical protein Msip34_1160 [Methylovor...   140   4e-32
ref|ZP_01301864.1| hypothetical protein SKA58_02280 [Sphingomona...   139   1e-31
ref|YP_001767097.1| hypothetical protein M446_0077 [Methylobacte...   139   1e-31

>ref|YP_004213213.1| hypothetical protein Rahaq_2479 [Rahnella sp. Y9602]
 gb|ADW74086.1| hypothetical protein Rahaq_2479 [Rahnella sp. Y9602]
          Length = 173

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/155 (49%), Positives = 93/155 (60%), Gaps = 9/155 (5%)

Query: 7   PDPGAMFSQDLIVDRLQHSAFRRRFVLKPPEYRYLQEHGLEEVLRHAESFIAARLAPAYP 66
           PD   MFS D +  RL  S FR+RF L   EYRY Q+ G E V +HA  FIA RLAPA P
Sbjct: 24  PDIQIMFSIDHVFKRLAASPFRQRFHLGAKEYRYCQDKGPETVSQHAADFIAKRLAPAEP 83

Query: 67  DKDGKQTPFRGHPVFVAQHATATCCRSCLEKWHGIRMGQNLTSLQTQHIIDMLARWLQDQ 126
           ++DGKQTP RGHPVF+AQHATATCCR CLEKWH I     +T  Q  + + ++  WL   
Sbjct: 84  EQDGKQTPMRGHPVFIAQHATATCCRGCLEKWHHIPAHTAMTPAQQHYAVTVILHWLHQ- 142

Query: 127 KAPLETQRPT----RKKSEKRPSRTAADERQGVLF 157
               E QRP      +KS K+ S T  + +Q  L 
Sbjct: 143 ----EMQRPAPVAKERKSNKKISDTPDNAQQMNLL 173


>ref|YP_004039622.1| hypothetical protein MPQ_1222 [Methylovorus sp. MP688]
 gb|ADQ84386.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 155

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 89/134 (66%), Gaps = 4/134 (2%)

Query: 12  MFSQDLIVDRLQHSAFRRRFVLKPPEYRYLQEHGLEEVLRHAESFIAARLAPAYPDKDGK 71
           M S D + DRLQ SAFRR+F L   E  YL++ GL  V++HA   +A RLA A P +DGK
Sbjct: 1   MPSLDALFDRLQQSAFRRQFKLGLKEQAYLRDKGLPLVMQHAGEIVANRLAAALPARDGK 60

Query: 72  QTPFRGHPVFVAQHATATCCRSCLEKWHGIRMGQNLTSLQTQHIIDMLARWLQDQKAPLE 131
           QTPFRGHPVF+AQHATA CCR CL +WHGI  G+ LT+ Q  +I+ +LARWL+     L 
Sbjct: 61  QTPFRGHPVFIAQHATACCCRGCLAEWHGIAQGKALTADQQAYIVRVLARWLEQAAGNL- 119

Query: 132 TQRPTRKKSEKRPS 145
              P   +S  RP+
Sbjct: 120 ---PPVAESAVRPA 130


>ref|YP_003050934.1| hypothetical protein Msip34_1160 [Methylovorus glucosetrophus
           SIP3-4]
 gb|ACT50407.1| hypothetical protein Msip34_1160 [Methylovorus glucosetrophus
           SIP3-4]
          Length = 155

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 88/134 (65%), Gaps = 4/134 (2%)

Query: 12  MFSQDLIVDRLQHSAFRRRFVLKPPEYRYLQEHGLEEVLRHAESFIAARLAPAYPDKDGK 71
           M S D + DRLQ SAFRR+F L   E  YL++ GL  V++HA   +A RLA A P +DGK
Sbjct: 1   MPSLDALFDRLQQSAFRRQFKLGLKEQTYLRDKGLPVVMQHAGEIVANRLAAALPARDGK 60

Query: 72  QTPFRGHPVFVAQHATATCCRSCLEKWHGIRMGQNLTSLQTQHIIDMLARWLQDQKAPLE 131
           QTPFRGHPVF+AQHATA CCR CL +WHGI  G  LT+ Q  +I+ +LARWL+     L 
Sbjct: 61  QTPFRGHPVFIAQHATACCCRGCLAEWHGIAQGSALTADQQAYIVRVLARWLEQAAGNL- 119

Query: 132 TQRPTRKKSEKRPS 145
              P   +S  RP+
Sbjct: 120 ---PPVAESAIRPA 130


>ref|ZP_01301864.1| hypothetical protein SKA58_02280 [Sphingomonas sp. SKA58]
 gb|EAT10569.1| hypothetical protein SKA58_02280 [Sphingomonas sp. SKA58]
          Length = 117

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 77/109 (70%)

Query: 18  IVDRLQHSAFRRRFVLKPPEYRYLQEHGLEEVLRHAESFIAARLAPAYPDKDGKQTPFRG 77
           +  RL  SAFR RF L   E  YL E GL+ +L H E FIA RLAPA P  DGKQTP RG
Sbjct: 7   LFARLGRSAFRSRFRLNANEQTYLAERGLDTILAHGEEFIAQRLAPALPLNDGKQTPMRG 66

Query: 78  HPVFVAQHATATCCRSCLEKWHGIRMGQNLTSLQTQHIIDMLARWLQDQ 126
           HPVFVAQHATATCCR+CL KWHGI  GQ L++   ++I+ ++ RWL D+
Sbjct: 67  HPVFVAQHATATCCRTCLSKWHGIAAGQRLSAQHQRYIVAVIRRWLSDR 115


>ref|YP_001767097.1| hypothetical protein M446_0077 [Methylobacterium sp. 4-46]
 gb|ACA14663.1| hypothetical protein M446_0077 [Methylobacterium sp. 4-46]
          Length = 148

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/115 (60%), Positives = 79/115 (68%)

Query: 12  MFSQDLIVDRLQHSAFRRRFVLKPPEYRYLQEHGLEEVLRHAESFIAARLAPAYPDKDGK 71
           M S D + DRL HSAFRRRF L   E   L+  G   +  HA  F+A RLAPA PD+DGK
Sbjct: 1   MRSLDEVFDRLPHSAFRRRFGLGAAERDVLRRIGWAGMTAHARDFVARRLAPARPDRDGK 60

Query: 72  QTPFRGHPVFVAQHATATCCRSCLEKWHGIRMGQNLTSLQTQHIIDMLARWLQDQ 126
           QTPFRGHPVFVAQHATATCCR CL KWH I  G+ LT  +  H++  LARWL+ Q
Sbjct: 61  QTPFRGHPVFVAQHATATCCRGCLAKWHRIPPGRPLTPAEQDHVVAALARWLRAQ 115