BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0066.p         (134 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004686847.1| effector of murein hydrolase LrgA [Cupriavid...   122   1e-26
ref|YP_002006565.1| lrga homolg; regulator of murein hydrolase a...   122   2e-26
ref|YP_296999.1| LrgA [Ralstonia eutropha JMP134] >gi|72119892|g...   121   4e-26
ref|YP_727541.1| putative effector of murein hydrolase LrgA [Ral...   120   7e-26
ref|YP_001115754.1| LrgA family protein [Burkholderia vietnamien...   119   1e-25

>ref|YP_004686847.1| effector of murein hydrolase LrgA [Cupriavidus necator N-1]
 gb|AEI78366.1| effector of murein hydrolase LrgA [Cupriavidus necator N-1]
          Length = 125

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 9/134 (6%)

Query: 1   MLASFATLLVFQCLGEGITFALKLPIPGPVVGMLLLFFTLVAYPPLLDRIEATGSELLRH 60
           ML +FA LLVFQ +GE I++AL LP+PGPV+GM+LLF  LV    LL  I+ T SELL+H
Sbjct: 1   MLQTFAILLVFQSVGEVISYALTLPVPGPVLGMILLFGWLVFDDRLLPIIQGTTSELLKH 60

Query: 61  LSLLFVPAGVGIVATAGQVRGHWLTVILAVVVSTLLTLAVTAAVTRAVMNWQNRQDQQNR 120
           LSLLFVPAGVGI+  A ++ G W+ +++A+VVST L +A TA VTR +M          +
Sbjct: 61  LSLLFVPAGVGIMVHANRIEGEWMPILVALVVSTWLAIATTAVVTRMLM---------RK 111

Query: 121 HTDGDKKDGEGDHA 134
             D    D +G+ A
Sbjct: 112 RADVPPADAKGEQA 125


>ref|YP_002006565.1| lrga homolg; regulator of murein hydrolase activity [Cupriavidus
           taiwanensis LMG 19424]
 emb|CAQ70504.1| putative LrgA homolg; putative regulator of murein hydrolase
           activity [Cupriavidus taiwanensis LMG 19424]
          Length = 128

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/134 (50%), Positives = 91/134 (67%), Gaps = 6/134 (4%)

Query: 1   MLASFATLLVFQCLGEGITFALKLPIPGPVVGMLLLFFTLVAYPPLLDRIEATGSELLRH 60
           ML +FA LLVFQ +GE I++AL LP+PGPV+GM+LLF  LV    LL  I+ T +ELL+H
Sbjct: 1   MLQTFAILLVFQSVGEVISYALTLPVPGPVLGMILLFGWLVFDDRLLPVIQGTTTELLKH 60

Query: 61  LSLLFVPAGVGIVATAGQVRGHWLTVILAVVVSTLLTLAVTAAVTRAVMNWQNRQDQQNR 120
           LSLLFVPAGVGI+  A ++ G W+ +++A+VVST L +A TA VTR +M       +++ 
Sbjct: 61  LSLLFVPAGVGIMVHANRIEGEWMPILVALVVSTWLAIATTAVVTRMLMR------KRSG 114

Query: 121 HTDGDKKDGEGDHA 134
             D    D  G+ A
Sbjct: 115 TPDAPPADARGEQA 128


>ref|YP_296999.1| LrgA [Ralstonia eutropha JMP134]
 gb|AAZ62155.1| LrgA [Ralstonia eutropha JMP134]
          Length = 130

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 92/134 (68%), Gaps = 4/134 (2%)

Query: 1   MLASFATLLVFQCLGEGITFALKLPIPGPVVGMLLLFFTLVAYPPLLDRIEATGSELLRH 60
           ML +FA LLVFQ +GE +++AL+LP+PGPV+GM++LF  LV    LL  I+ T SELL+H
Sbjct: 1   MLQTFAILLVFQSVGEVVSYALRLPVPGPVLGMIMLFGWLVFDDRLLPIIQGTTSELLKH 60

Query: 61  LSLLFVPAGVGIVATAGQVRGHWLTVILAVVVSTLLTLAVTAAVTRAVMNWQNRQDQQNR 120
           LSLLFVPAGVGI+  A ++ G W+ +++A+VVST L +A TA VTR +M    R+ +   
Sbjct: 61  LSLLFVPAGVGIMVHANRIEGEWMPILIALVVSTWLAIATTAVVTRMLM----RKPKAPA 116

Query: 121 HTDGDKKDGEGDHA 134
               +  D  G+ A
Sbjct: 117 AQAANAADHSGEQA 130


>ref|YP_727541.1| putative effector of murein hydrolase LrgA [Ralstonia eutropha H16]
 emb|CAJ94173.1| putative effector of murein hydrolase LrgA [Ralstonia eutropha H16]
          Length = 125

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 89/134 (66%), Gaps = 9/134 (6%)

Query: 1   MLASFATLLVFQCLGEGITFALKLPIPGPVVGMLLLFFTLVAYPPLLDRIEATGSELLRH 60
           ML +FA LLVFQ +GE I++AL LP+PGPV+GM+LLF  L     LL  I+ T +ELL+H
Sbjct: 1   MLQTFAILLVFQSIGEVISYALTLPVPGPVLGMILLFGWLAFDDRLLPIIQGTTTELLKH 60

Query: 61  LSLLFVPAGVGIVATAGQVRGHWLTVILAVVVSTLLTLAVTAAVTRAVMNWQNRQDQQNR 120
           LSLLFVPAGVGI+  A ++ G W+ +++A+VVST L +A TA VTR +M          +
Sbjct: 61  LSLLFVPAGVGIMVHANRIEGEWMPILVALVVSTWLAIATTAVVTRMLM---------RK 111

Query: 121 HTDGDKKDGEGDHA 134
             D    D +G+ A
Sbjct: 112 RADVPPADAKGEQA 125


>ref|YP_001115754.1| LrgA family protein [Burkholderia vietnamiensis G4]
 gb|ABO59499.1| LrgA family protein [Burkholderia vietnamiensis G4]
          Length = 123

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 85/113 (75%)

Query: 1   MLASFATLLVFQCLGEGITFALKLPIPGPVVGMLLLFFTLVAYPPLLDRIEATGSELLRH 60
           ML +FA LL FQCLGEG+++   +P+PGPV+GMLLLF  ++  P + D IE T  ELLRH
Sbjct: 1   MLQAFAVLLTFQCLGEGVSYLFGIPVPGPVIGMLLLFGFVMLRPQVADAIEPTAFELLRH 60

Query: 61  LSLLFVPAGVGIVATAGQVRGHWLTVILAVVVSTLLTLAVTAAVTRAVMNWQN 113
           LSLLFVPAGVGI+ +A +VRG  L V++A+ VST L +AVTA VTRA++  Q 
Sbjct: 61  LSLLFVPAGVGIMVSASRVRGDALAVVVALAVSTTLAIAVTALVTRALLRRQR 113