BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0055.p (381 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352455.1| aldehyde dehydrogenase [Janthinobacterium sp... 470 e-130 ref|YP_001099484.1| isoquinoline 1-oxidoreductase subunit beta [... 456 e-126 ref|YP_546724.1| twin-arginine translocation pathway signal [Met... 451 e-125 ref|YP_004752941.1| isoquinoline 1-oxidoreductase subunit beta [... 437 e-120 ref|NP_883044.1| putative aldehyde dehydrogenase [Bordetella par... 413 e-113 >ref|YP_001352455.1| aldehyde dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR91251.1| aldehyde dehydrogenase [Janthinobacterium sp. Marseille] Length = 780 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 216/272 (79%), Positives = 240/272 (88%) Query: 108 GAKGEAPFELAMSAVNIPYAIPNIRVEAPEVEAHTRIGWFRSVSNIPHAFAVQSFSAELA 167 GAKGE PFEL MSAVNIP+ IPN RVEAPEVEAHTRIGWFRSVSNIPH FA+QSF AELA Sbjct: 505 GAKGEQPFELGMSAVNIPFTIPNFRVEAPEVEAHTRIGWFRSVSNIPHVFAIQSFVAELA 564 Query: 168 AAAKRDHRDYLLELIGPARKINPSEMADGWNYGESPERYPLDTGRMRGVIELATSKAGWG 227 AAAKRDHRDYLL+LIGPARKINP +MAD WNYGESPERYPLDTGRMR + LAT+KAGWG Sbjct: 565 AAAKRDHRDYLLDLIGPARKINPKDMADEWNYGESPERYPLDTGRMRNTVTLATNKAGWG 624 Query: 228 RKLPKGRGLGLAVCYSFVTYIAAVVEVEVNDEGEVSIPRVDIAVDCGPSINPDRIRSQVE 287 RKLPKG GLGLAV YSFVTY+A V+E ++D+GE+SIPRVDIAVDCG INPDRIRSQ+E Sbjct: 625 RKLPKGHGLGLAVSYSFVTYVAVVIEAVISDKGELSIPRVDIAVDCGAQINPDRIRSQIE 684 Query: 288 GACIMGISLAMTGEISFKNGAVEQSNFHDYEVLRAFAAPAKIDVHIVPHTLDVPLGGVGE 347 GACIMG+SLA+TGEI+FK+G EQ NFH+YEV+R+ AP +I VH + H DVPLGGVGE Sbjct: 685 GACIMGLSLALTGEITFKDGRAEQGNFHEYEVMRSMDAPREIRVHFIKHDFDVPLGGVGE 744 Query: 348 PATPTIAPALCNAIFAATGKRIRQLPIREQLK 379 PATP IAPALCNAIFAATGKRIR LP+R QL+ Sbjct: 745 PATPPIAPALCNAIFAATGKRIRDLPLRNQLQ 776 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 81/144 (56%), Positives = 105/144 (72%), Gaps = 8/144 (5%) Query: 1 MVYAVIARPPVYGGKLAKVDSSEALKVPGVIRVVELKGSPPPALFNPLGGVAVIARNTWA 60 M+YAV+ARP V GGK+ D+SEALKV GVI+V+ELK SP PA F+PLGG+AVIA+NTWA Sbjct: 247 MLYAVVARPLVMGGKVRSFDASEALKVSGVIQVIELKSSPAPAGFHPLGGIAVIAKNTWA 306 Query: 61 AIKGREALKLTWDNGPNASYDSAEFRKTMEAAARQPAKAVRNAGGPAGAKGEAPFELAMS 120 AIKGREALK+TWD+G +ASY+SAE++KT++ AAR+PAKAVRN G ++ + Sbjct: 307 AIKGREALKITWDDGKHASYNSAEYKKTLQDAARKPAKAVRNNGDTMNVLAKSTRRMEAE 366 Query: 121 AVNIPYAIPNI---RVEAPEVEAH 141 Y +P+I +E P AH Sbjct: 367 -----YYLPHIAHATMEPPSATAH 385 >ref|YP_001099484.1| isoquinoline 1-oxidoreductase subunit beta [Herminiimonas arsenicoxydans] emb|CAL61357.1| Isoquinoline 1-oxidoreductase, beta subunit [Herminiimonas arsenicoxydans] Length = 779 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 217/272 (79%), Positives = 237/272 (87%) Query: 108 GAKGEAPFELAMSAVNIPYAIPNIRVEAPEVEAHTRIGWFRSVSNIPHAFAVQSFSAELA 167 GAKGE PFEL MSAVNIP+ IPN RVEAPEVEAHTRIGWFRSVSNIPH FA+QSF AELA Sbjct: 506 GAKGEQPFELGMSAVNIPFVIPNFRVEAPEVEAHTRIGWFRSVSNIPHVFAIQSFVAELA 565 Query: 168 AAAKRDHRDYLLELIGPARKINPSEMADGWNYGESPERYPLDTGRMRGVIELATSKAGWG 227 AAAKRDHRDYLLELIGPARKINP +M+D WNYGESPERYPLDTGRMR I LAT KAGWG Sbjct: 566 AAAKRDHRDYLLELIGPARKINPKDMSDDWNYGESPERYPLDTGRMRKTISLATDKAGWG 625 Query: 228 RKLPKGRGLGLAVCYSFVTYIAAVVEVEVNDEGEVSIPRVDIAVDCGPSINPDRIRSQVE 287 RKLPKG GLGLAV YSFVTY+A V+EV V G++SIPRVDIAVDCGP INPDRIRSQ+E Sbjct: 626 RKLPKGHGLGLAVSYSFVTYVAVVIEVVVAANGDLSIPRVDIAVDCGPQINPDRIRSQLE 685 Query: 288 GACIMGISLAMTGEISFKNGAVEQSNFHDYEVLRAFAAPAKIDVHIVPHTLDVPLGGVGE 347 GACIMG+SLA++GEI+FK+G EQ NFH+YEV+R+ AP I +H + H DVPLGGVGE Sbjct: 686 GACIMGLSLALSGEITFKDGRAEQGNFHEYEVMRSMDAPRDIRIHFIHHDFDVPLGGVGE 745 Query: 348 PATPTIAPALCNAIFAATGKRIRQLPIREQLK 379 PATP IAPALCNAIFAATGKRIR LP+R QLK Sbjct: 746 PATPPIAPALCNAIFAATGKRIRDLPVRNQLK 777 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 74/104 (71%), Positives = 91/104 (87%) Query: 1 MVYAVIARPPVYGGKLAKVDSSEALKVPGVIRVVELKGSPPPALFNPLGGVAVIARNTWA 60 M+YAVIARP V GGK+ D+S ALKVPGVI+V+ELK SPPPA F+PLGG+AVIA NTWA Sbjct: 248 MLYAVIARPMVLGGKVKSFDASAALKVPGVIQVIELKSSPPPASFHPLGGIAVIANNTWA 307 Query: 61 AIKGREALKLTWDNGPNASYDSAEFRKTMEAAARQPAKAVRNAG 104 AIKGREALK+TWD+G +A+Y+S E++KT++ AAR+PAKAVRN G Sbjct: 308 AIKGREALKITWDDGKHANYNSVEYKKTLQEAARKPAKAVRNNG 351 >ref|YP_546724.1| twin-arginine translocation pathway signal [Methylobacillus flagellatus KT] gb|ABE50883.1| Twin-arginine translocation pathway signal [Methylobacillus flagellatus KT] Length = 766 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 208/271 (76%), Positives = 236/271 (87%) Query: 109 AKGEAPFELAMSAVNIPYAIPNIRVEAPEVEAHTRIGWFRSVSNIPHAFAVQSFSAELAA 168 A+G APFEL M AVN+P+ IPN+RVE+P V AHTRIGWFRSVSNIPHAFA QSF AELA Sbjct: 495 AQGGAPFELGMGAVNLPFTIPNMRVESPPVPAHTRIGWFRSVSNIPHAFATQSFVAELAH 554 Query: 169 AAKRDHRDYLLELIGPARKINPSEMADGWNYGESPERYPLDTGRMRGVIELATSKAGWGR 228 A RDHRDYLL+L+GPARK++P ++D WNYGESPERYPLD GRMR V+ELAT KAGWGR Sbjct: 555 KAGRDHRDYLLDLLGPARKVDPDSISDSWNYGESPERYPLDIGRMRHVVELATQKAGWGR 614 Query: 229 KLPKGRGLGLAVCYSFVTYIAAVVEVEVNDEGEVSIPRVDIAVDCGPSINPDRIRSQVEG 288 KLPKG GLGLA CYSFVTY+AAVVE+ V+D+GE+SIPRVDIAVDCGP +NPDRIRSQ EG Sbjct: 615 KLPKGHGLGLAFCYSFVTYVAAVVELVVSDDGEISIPRVDIAVDCGPQVNPDRIRSQAEG 674 Query: 289 ACIMGISLAMTGEISFKNGAVEQSNFHDYEVLRAFAAPAKIDVHIVPHTLDVPLGGVGEP 348 ACIMG SLA+TGEISFKNG +Q+NFH+Y+V+R AP I V++V H LDVPLGGVGEP Sbjct: 675 ACIMGASLALTGEISFKNGVAQQNNFHEYQVMRIEEAPRDIHVYLVDHGLDVPLGGVGEP 734 Query: 349 ATPTIAPALCNAIFAATGKRIRQLPIREQLK 379 TPTIAPA+CNAIFAATGKRIR LPIR+QLK Sbjct: 735 VTPTIAPAICNAIFAATGKRIRTLPIRDQLK 765 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 74/113 (65%), Positives = 95/113 (84%) Query: 1 MVYAVIARPPVYGGKLAKVDSSEALKVPGVIRVVELKGSPPPALFNPLGGVAVIARNTWA 60 M++AV+ARPPV+GGK+ D+S ALKVPGV++V+EL+GS P LF+PLGG+AV+A NTWA Sbjct: 236 MLHAVVARPPVFGGKVKSFDASAALKVPGVVKVIELQGSNLPPLFHPLGGIAVLANNTWA 295 Query: 61 AIKGREALKLTWDNGPNASYDSAEFRKTMEAAARQPAKAVRNAGGPAGAKGEA 113 AIKGREALK+ WD+G NA+YDS+ FRKTME AAR+PAKA+R+ G AG +A Sbjct: 296 AIKGREALKIDWDHGANAAYDSSAFRKTMEEAARKPAKAMRDTGDAAGVLAKA 348 >ref|YP_004752941.1| isoquinoline 1-oxidoreductase subunit beta [Collimonas fungivorans Ter331] gb|AEK62118.1| Isoquinoline 1-oxidoreductase beta subunit [Collimonas fungivorans Ter331] Length = 778 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/330 (67%), Positives = 258/330 (78%), Gaps = 16/330 (4%) Query: 68 LKLTWDNGPNASYD-----SAEFRKTMEAAARQPAKAVRNAGGP-------AGAKGEAPF 115 +K+TW + +D S E ++ A +P + P AGAKGE P Sbjct: 449 VKVTWTREDDLRHDYFHTVSLEHLESTLDAKGKPQAWLHRTAAPTIASTFVAGAKGEQPG 508 Query: 116 ELAMSAVNIPYAIPNIRVEAPEVEAHTRIGWFRSVSNIPHAFAVQSFSAELAAAAKRDHR 175 EL M A+NIP+ IPNIR+EAPEVEAHTRIGWFRSV NIPHAFAVQSF AELAAAAKRDHR Sbjct: 509 ELGMGAINIPFVIPNIRIEAPEVEAHTRIGWFRSVYNIPHAFAVQSFVAELAAAAKRDHR 568 Query: 176 DYLLELIGPARKINPSEMADGWNYGESPERYPLDTGRMRGVIELATSKAGWGRKLPKGRG 235 ++LLELIGPAR+INP EM+D NYGESP YPLDTGRMR V+ELAT +AGWGRKL KG G Sbjct: 569 EFLLELIGPARQINPQEMSDTTNYGESPVLYPLDTGRMRAVVELATKEAGWGRKLLKGHG 628 Query: 236 LGLAVCYSFVTYIAAVVEVEVNDEGEVSIPRVDIAVDCGPSINPDRIRSQVEGACIMGIS 295 LGLAV YSF++Y+AAV+EV V D+G +SIPRVD+A+DCGP I PDRIRSQVEGACIMG+S Sbjct: 629 LGLAVAYSFMSYVAAVIEVVVADDGTISIPRVDMAIDCGPQITPDRIRSQVEGACIMGLS 688 Query: 296 LAMTGEISFKNGAVEQSNFHDYEVLRAFAAPAKIDVHIVPHTLD----VPLGGVGEPATP 351 LA+TGEI+FKNG+ EQ NFH+YEVLRAF+AP + VH+VPH +PLGGVGEP TP Sbjct: 689 LALTGEITFKNGSAEQGNFHEYEVLRAFSAPRDLRVHMVPHKSSMYDTMPLGGVGEPGTP 748 Query: 352 TIAPALCNAIFAATGKRIRQLPIREQLKKA 381 IAPALCNAIFAATGKRIR LPIR+Q KK+ Sbjct: 749 PIAPALCNAIFAATGKRIRNLPIRDQAKKS 778 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 87/148 (58%), Positives = 108/148 (72%), Gaps = 8/148 (5%) Query: 1 MVYAVIARPPVYGGKLAKVDSSEALKVPGVIRVVELKGSPPPALFNPLGGVAVIARNTWA 60 M+YAV+ARPPVYGGK+A D +EALK+PGV++V+ELKGSPPPA FNPLGG+AVIARNTWA Sbjct: 243 MLYAVVARPPVYGGKVASFDPAEALKIPGVVKVIELKGSPPPAKFNPLGGIAVIARNTWA 302 Query: 61 AIKGREALKLTWDNGPNASYDSAEFRKTMEAAARQPAKAVRNAGGPAGAKGEAPFELAMS 120 AIKGREALK+TWDNGP+ YDS F+ T++ AAR+PAK VRN+G G+A Sbjct: 303 AIKGREALKITWDNGPHGGYDSTAFKVTLQEAARKPAKVVRNSGDTMAVLGQAG-----K 357 Query: 121 AVNIPYAIPNI---RVEAPEVEAHTRIG 145 + Y IP++ +E P A T G Sbjct: 358 RIEAEYYIPHLAHATMEPPAATARTANG 385 >ref|NP_883044.1| putative aldehyde dehydrogenase [Bordetella parapertussis 12822] emb|CAE40113.1| putative aldehyde dehydrogenase [Bordetella parapertussis] Length = 783 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 209/325 (64%), Positives = 241/325 (74%), Gaps = 14/325 (4%) Query: 68 LKLTW---DNGPNASYDSAEFRKTMEAAARQPAKAV---RNAGGP-------AGAKGEAP 114 +K+TW D+ N + + + +EA KAV P AGA+G+ P Sbjct: 459 VKVTWSREDDLANDYFHTVSVER-LEAGVDAQGKAVAWLHRTAAPTIGSTFAAGAEGQQP 517 Query: 115 FELAMSAVNIPYAIPNIRVEAPEVEAHTRIGWFRSVSNIPHAFAVQSFSAELAAAAKRDH 174 FEL MSA+NIP+ IPN RVE+ V AHTRIGWFRSVSNIPHAFAVQSF AE+A A RD Sbjct: 518 FELGMSAINIPFDIPNFRVESVPVPAHTRIGWFRSVSNIPHAFAVQSFVAEMAHALGRDP 577 Query: 175 RDYLLELIGPARKINPSEMADGWNYGESPERYPLDTGRMRGVIELATSKAGWGRKLPKGR 234 RDYLLELIGP R+I P+ M+DGWNYGESPE YPLDTGRMR VIE+AT AGWGRKL GR Sbjct: 578 RDYLLELIGPPRRIAPAAMSDGWNYGESPELYPLDTGRMRHVIEVATGAAGWGRKLAAGR 637 Query: 235 GLGLAVCYSFVTYIAAVVEVEVNDEGEVSIPRVDIAVDCGPSINPDRIRSQVEGACIMGI 294 GLG+AV YSFVTYIA VVEVEV +G +++PRV +AVDCGP ++PDR+R+QVEGACIMG+ Sbjct: 638 GLGVAVSYSFVTYIATVVEVEVGQDGAIAVPRVHVAVDCGPQVHPDRVRAQVEGACIMGL 697 Query: 295 SLAMTGEISFKNGAVEQSNFHDYEVLRAFAAPAKIDVHIVPHTLDVPLGGVGEPATPTIA 354 SLA EISF G Q+NFH YEV R AP +I VH+V H DVPLGGVGEPA P A Sbjct: 698 SLATRSEISFAQGRATQTNFHQYEVARMPEAPREIVVHLVEHGFDVPLGGVGEPAVPPFA 757 Query: 355 PALCNAIFAATGKRIRQLPIREQLK 379 PALCNAIFAATGKRIR LPIR+QLK Sbjct: 758 PALCNAIFAATGKRIRALPIRDQLK 782 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/104 (60%), Positives = 79/104 (75%) Query: 1 MVYAVIARPPVYGGKLAKVDSSEALKVPGVIRVVELKGSPPPALFNPLGGVAVIARNTWA 60 M+YA +ARP V GGK+ + ALKVPGV++VVEL P P +F PLGGVAVIA +TWA Sbjct: 253 MLYASVARPAVLGGKVKAYKAEAALKVPGVVKVVELPAGPTPPVFAPLGGVAVIASDTWA 312 Query: 61 AIKGREALKLTWDNGPNASYDSAEFRKTMEAAARQPAKAVRNAG 104 A+KGR+AL++ WD+GP+ASYDS FRKT+ A +PAK VRN G Sbjct: 313 ALKGRQALEIEWDDGPHASYDSEAFRKTLSEGAGKPAKPVRNDG 356