BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0051.p (944 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001610843.1| two-component system sensor histidine kinase... 782 0.0 ref|YP_591474.1| multi-sensor signal transduction histidine kina... 776 0.0 ref|ZP_01462640.1| multi-sensor Hybrid Histidine Kinase [Stigmat... 748 0.0 ref|YP_003957541.1| sensor protein [Stigmatella aurantiaca DW4/3... 748 0.0 ref|YP_001611350.1| two-component hybrid sensor and regulator [S... 733 0.0 >ref|YP_001610843.1| two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') [Sorangium cellulosum 'So ce 56'] emb|CAN90363.1| two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') [Sorangium cellulosum 'So ce 56'] Length = 1143 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/919 (47%), Positives = 577/919 (62%), Gaps = 57/919 (6%) Query: 11 SFLQGTGTLGQLILNHDWSASPLGPIDNWPQSLKTSISLMINSRQPMWLGWGEEATFFYN 70 + L G G +G + DWS +PLGP+ +WPQSLKT + +++ SRQPM++ WG+ YN Sbjct: 17 AVLAGGGEMGARMRAIDWSKTPLGPVSSWPQSLKTCVRIVLTSRQPMFVWWGDSLINLYN 76 Query: 71 DAYIAVLSESKHPWALGRPVTEVWAEIWDICGPLADKVFQHAEATLVDDIRLFMNRDSGL 130 DAY +++ KHP ALG+P + VW EIW GP A + E T + + L M R+ Sbjct: 77 DAYKSIVG-GKHPEALGQPASVVWREIWGQVGPRAASAMRRDEGTYDEALLLIMERNGYQ 135 Query: 131 EENYFSFSYSPIRDESGKVGGLFCTNAEMTSKHLNARRLRTLSELAQRALVEKTASGAAA 190 EE Y++FSYSP+ ++ G GG+ C N E T + + R+L L +L R ++ A Sbjct: 136 EETYYTFSYSPVPNDQGGTGGILCANTEDTRRIIGERQLSLLRDLTARTAHGRSWEDVCA 195 Query: 191 TAAAILAQNPDDIPFALLYLTDCDRRQVRLEQSVHILPLSLVVPDSADVGHVDV-DTTAV 249 A+ LA N D+PFALLY+ D DRR+V+L S + GH +T A+ Sbjct: 196 LVASSLATNAKDLPFALLYVVDPDRRRVQLAGSTGF-----------ERGHAAAPETIAL 244 Query: 250 SHVGNDAKATPTFWPFAQALGAGGKT-VVDV-SGLDTLPLGPADQPLRQAVMLPLQTPGQ 307 + A+P WP A L VV++ + L LP G +P +A L + G+ Sbjct: 245 T------DASP--WPLAAVLREHESCRVVEIPTHLRDLPTGAWQRPPTRAAALAISPSGE 296 Query: 308 EHPLGVLICGVNPTRPLDEDYATFFNLLAGQVGMAIQNARSVEAEKQRADLLAELDQAKT 367 GVLI G+NP R D+DY F +L+AGQ+ +I NA++ E EK+RA+ LAELD+AKT Sbjct: 297 TGRAGVLIVGLNPFRLFDDDYRGFLHLVAGQISASIANAQAYEEEKRRAEALAELDRAKT 356 Query: 368 TFFSNVSHEFRTPLTLMLGPLDDMIADKEHGLPPVQQERAQMLRRNALRLQRLVNALLDF 427 TFFSNVSHEFRTPLTLMLGPL+D +A E L E A RNA+RL +LVNALLDF Sbjct: 357 TFFSNVSHEFRTPLTLMLGPLEDALASAERSLSGADLETAH---RNAVRLLKLVNALLDF 413 Query: 428 SRTQAGRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEETYVDPSMWEKI 487 SR +AGR QASY DL+A TADLAS FRS +E AGL FEVDCP L E YVD MWEKI Sbjct: 414 SRIEAGRIQASYEPTDLSALTADLASAFRSAMERAGLAFEVDCPALPEPIYVDHDMWEKI 473 Query: 488 VLNLLSNAFKFTFAGKISVRLRGHGDHIRLTVSDTGVGIASDQLPLVFKRFHRIEGSQSR 547 VLNLLSNA KFTF G +S+ LR HGD LTV DTG GI +L +FKRFHR++G++SR Sbjct: 474 VLNLLSNALKFTFEGTVSISLRAHGDRADLTVRDTGTGIPERELSHLFKRFHRVQGARSR 533 Query: 548 THEGSGIGLALVRDLVTLLGGTIGVDSDLELGSSFTLTIPSGRAHLPSERV--VESLGPV 605 THEGSGIGLALV +LV L GGTI V S+L +G+SFT+++P G HLP +RV +L Sbjct: 534 THEGSGIGLALVHELVRLHGGTIHVTSELSVGTSFTVSLPRGAGHLPKDRVNAARTLAST 593 Query: 606 NSSLSPLGDAYAAEADRW---------SGARNGNTAE--------PEDAATAERNRANQV 648 + +P + EA RW GA NT E P D A E A Sbjct: 594 TTGAAP----FVQEALRWLPRAESASPPGAEGDNTVEHLAPAAWTPSDGAALEAGPAG-- 647 Query: 649 LSASARILVADDNADMREYLSNLLQSHWRVEAVGNGVEALESVRANPPDLILSDVMMPQL 708 R+L+ADDNADMREY+ +L+ W VEAV +G EAL S R +PP L+L+DVMMP L Sbjct: 648 -----RVLLADDNADMREYVGRVLRERWTVEAVADGAEALASARRSPPALVLTDVMMPNL 702 Query: 709 DGFGLLAALRSNDASKDIPFFLLSARSGEEARLEGLAAGADDYLVKPFSSRELIARIESM 768 DGFGLL ALR+++ ++ +P +LSAR+GEE+R+EGL AGADDYL KPFS+REL+AR+ + Sbjct: 703 DGFGLLRALRADERTRAVPVVMLSARAGEESRVEGLEAGADDYLPKPFSARELVARVATH 762 Query: 769 LLRSQIRAMEKRHADRMATIFAQAPVAIAITRGPNHVFELANAPYQELVGNRPIIGRSVR 828 L +++RA +R +R+ +F QAPV IA+ GP H +E+AN PY E+VG R ++G+SVR Sbjct: 763 LQLARLRAAAERERERLYDLFMQAPVPIAVFAGPEHRYEVANPPYCEMVGRRDLVGKSVR 822 Query: 829 ESLPELEGQTVLDLLDNVYRTAEPYIGRSMGVRLRRSPGEVDERFFDFVYQPMLKTDGSI 888 E+ PEL + +LD + +P + + +RR G V+E F++V QP+ G++ Sbjct: 823 EAFPELGEHEAIAMLDRAFEAGQPLRMTELSIPVRRG-GAVNEAVFNYVAQPIRDPSGAV 881 Query: 889 EGIAVVAFEVTELTRARAR 907 G+ VVAFE+T+ AR R Sbjct: 882 SGVMVVAFEITDQVLARRR 900 Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%) Query: 359 LAELDQAKTTFFSNVSHEFRTPLTLMLGPLDDMIADKEHG-LPPVQQERAQMLRRNALRL 417 LA+ +Q F SH+ + PL + L + I + G L QE +LR RL Sbjct: 915 LAKTNQELDQFAYVASHDLKAPLR-GIANLSEWIEESLAGKLDGETQEHIHLLRGRVRRL 973 Query: 418 QRLVNALLDFSRTQAGRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEET 477 + L++ +L +SR AGR + V +D A++ S EGA + P +A E Sbjct: 974 EALIDGILHYSR--AGRLRGDVVSVDTGHLLAEVVELL-SPPEGARVDIAPGMPTIAAER 1030 Query: 478 YVDPSMWEKIVLNLLSNAFKFTFA--GKISVRLRGHGDHIRLTVSDTGVGIASDQLPLVF 535 +++ NL+SNA K ++ V G ++ VSD G GIA + ++ Sbjct: 1031 VP----MQQVFQNLISNALKHARRSDARVEVTCEDAGAYVEFAVSDNGPGIAPEYHERIW 1086 Query: 536 KRFHRIEGSQSRTHEGSGIGLALVRDLV 563 FH +E S+ + EG+GIGL++V+ +V Sbjct: 1087 DLFHTLE-SRDKV-EGTGIGLSVVKKIV 1112 >ref|YP_591474.1| multi-sensor signal transduction histidine kinase [Candidatus Koribacter versatilis Ellin345] gb|ABF41400.1| multi-sensor signal transduction histidine kinase [Candidatus Koribacter versatilis Ellin345] Length = 1131 Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/763 (51%), Positives = 520/763 (68%), Gaps = 19/763 (2%) Query: 13 LQGTGTLGQLILNHDWSASPLGPIDNWPQSLKTSISLMINSRQPMWLGWGEEATFFYNDA 72 L G L QL+ +HDWS +PLGP+ WP +L+T ++L++NS+ PMW+GWG+EATF YNDA Sbjct: 29 LSGDSELAQLMRDHDWSQTPLGPVSQWPPNLRTCVNLILNSQHPMWIGWGDEATFLYNDA 88 Query: 73 YIAVLSESKHPWALGRPVTEVWAEIWDICGPLADKVFQHAEATLVDDIRLFMNRDSGLEE 132 YI VLS +KHPWALGRP +EVWAEIWDICGPLA KVF+ EAT VD++RLFMNR LEE Sbjct: 89 YIQVLSSAKHPWALGRPASEVWAEIWDICGPLAAKVFERGEATFVDEVRLFMNRGDFLEE 148 Query: 133 NYFSFSYSPIRDESGKVGGLFCTNAEMTSKHLNARRLRTLSELAQRALVEKTASGAAATA 192 Y+SFSYS I D+SGKV GLFC +AE+T++ LNARRLRTLSEL+ A + KT A +A Sbjct: 149 TYYSFSYSAICDDSGKVVGLFCPSAEVTARVLNARRLRTLSELSSSAFLAKTVEDAFTSA 208 Query: 193 AAILAQNPDDIPFALLYLTDCDRRQVRLEQSVHILPLSLVVPDSADVGHVDVDTTAVSHV 252 + +A+NPDDIPF+LLY+ + ++ L+ + P S+V + + D A + Sbjct: 209 SQTIAENPDDIPFSLLYIVSPETLELELKANART-PESVVERFFSHANLANADNEAAKGI 267 Query: 253 GNDAKATPTFWPFAQALGAGGKTVVDVSGLDTLPLGPADQPLRQAVMLPLQTPGQEHPLG 312 + L G V+ + LPLG ADQ ++QA++LP+ + ++ LG Sbjct: 268 N-------------EVLRLGAPRVISTDDIPDLPLGLADQRVKQAIVLPVNSRAEDRALG 314 Query: 313 VLICGVNPTRPLDEDYATFFNLLAGQVGMAIQNARSVEAEKQRADLLAELDQAKTTFFSN 372 VL+ G+NPTR LD +Y TF++L+AG V AI NAR+ + E++RA+ LAELD+AKTTF+SN Sbjct: 315 VLVAGINPTRQLDTEYRTFYSLVAGHVATAIANARAYDEERRRAEALAELDRAKTTFYSN 374 Query: 373 VSHEFRTPLTLMLGPLDDMIADKEHGLPPVQQERAQMLRRNALRLQRLVNALLDFSRTQA 432 VSHEFRTPLTLMLGPL++++ E + P ++ RN RL +LVN LLDFSR +A Sbjct: 375 VSHEFRTPLTLMLGPLEELLGKSERAIRPENHHLVEVAYRNGTRLLKLVNTLLDFSRIEA 434 Query: 433 GRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEETYVDPSMWEKIVLNLL 492 GR S+ DL AFTA+L + FRS + AGL E++ L YV+ MWEKIVLNLL Sbjct: 435 GRMNVSFQATDLVAFTAELTALFRSATDKAGLRLEIESDALPHRVYVNREMWEKIVLNLL 494 Query: 493 SNAFKFTFAGKISVRLRGHGDHIRLTVSDTGVGIASDQLPLVFKRFHRIEGSQSRTHEGS 552 SNAFKFTF G I++ LR GD + ++V DTGVGI ++LP VF+RFHR+EG++ R+ EGS Sbjct: 495 SNAFKFTFEGGITIALRDGGDGVAVSVRDTGVGIPPNELPRVFERFHRVEGAKGRSFEGS 554 Query: 553 GIGLALVRDLVTLLGGTIGVDSDLELGSSFTLTIPSGRAHLPSERVVESLGPVNSSLSPL 612 GIGL+LV++LV GGTI V+S++ G++F + +P G HLP+ RV E G + S + Sbjct: 555 GIGLSLVQELVKTHGGTIEVESEVGKGTTFHIHLPYGTEHLPANRVSEEAG--SGSARAI 612 Query: 613 GDAYAAEADRWSGARNGNTAEPEDAATAERNRANQVLSASARILVADDNADMREYLSNLL 672 Y AEA W G + A + A A L+ +L+ADDN DMREY+ LL Sbjct: 613 AVPYVAEALSWLGPQAAEAAAAQLAEVGATLAA---LAGRPSLLLADDNRDMREYIERLL 669 Query: 673 QSHWRVEAVGNGVEALESVRANPPDLILSDVMMPQLDGFGLLAALRSNDASKDIPFFLLS 732 S +R+ A NG ALE +PPDL+L+DVMMP++DGF LLAALR+N A+ IP +LS Sbjct: 670 GSRYRIRAASNGKRALEMATEDPPDLVLTDVMMPEMDGFELLAALRANSATSTIPIIVLS 729 Query: 733 ARSGEEARLEGLAAGADDYLVKPFSSRELIARIESMLLRSQIR 775 AR+GEEA++EGL GADDYLVKPFS+REL+AR+E+ L S R Sbjct: 730 ARAGEEAQIEGLQHGADDYLVKPFSARELVARVENNLRLSTFR 772 >ref|ZP_01462640.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca DW4/3-1] gb|EAU66553.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca DW4/3-1] Length = 1358 Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/911 (45%), Positives = 577/911 (63%), Gaps = 38/911 (4%) Query: 13 LQGTGTLGQLILNHDWSASPLGPIDNWPQSLKTSISLMINSRQPMWLGWGEEATFFYNDA 72 L+G G G L+ + DWS + +GP+D WPQSL+T++ +++NS P+++ WG + YNDA Sbjct: 64 LRGGGECGALMRHVDWSKTAIGPVDQWPQSLRTAVGILLNSNYPLYIAWGPQYVQLYNDA 123 Query: 73 YIAVLSESKHPWALGRPVTEVWAEIWDICGPLADKVFQHAEATLVDDIRLFMNRDSGLEE 132 Y + +KHP ALG+ W E+W + GP DK+ EA V+++ + ++R+ +EE Sbjct: 124 YRPICGATKHPAALGQEAQVTWPEVWHLLGPGFDKIRSTGEANWVENLMMPLDRNGFVEE 183 Query: 133 NYFSFSYSPIRDESGKVGGLFCTNAEMTSKHLNARRLRTLSELAQRALVEKTASGAAATA 192 YF++S+SPI DE+G VGG+F E T + L+ARRL TL +L+ K+A A A Sbjct: 184 CYFTYSHSPILDETGGVGGIFAALTETTEQVLDARRLCTLKDLSANTADMKSAQAACEMA 243 Query: 193 AAILAQNPDDIPFALLYLTDCDRRQVRLEQSVHILPLSLVVPDSADVGHVDVDTTAVSHV 252 A +L+QNP D+PFALLYL D VRL + + P S P D+ D Sbjct: 244 ARVLSQNPHDVPFALLYLVAEDGHSVRLAGATGLQPGSAPAPAFIDLRGTDP-------- 295 Query: 253 GNDAKATPTFWPFAQALGAGGKTVVDVSGL----DTLPLGPADQPLRQAVMLPLQTPGQE 308 W + + AG T V + GL LP GP +P A+ LPL G+ Sbjct: 296 ----------WNLREVMRAG--TGVRLEGLAGRMGPLPGGPWPEPATTALALPLALAGRS 343 Query: 309 HPLGVLICGVNPTRPLDEDYATFFNLLAGQVGMAIQNARSVEAEKQRADLLAELDQAKTT 368 P G +I G +P LD+ Y +F L+ Q A+Q+AR+ E EKQRA+ LA+LDQAKT Sbjct: 344 QPSGAVILGASPRCALDDKYESFLKLVGAQAATAVQSARAFEEEKQRAEALAKLDQAKTA 403 Query: 369 FFSNVSHEFRTPLTLMLGPLDDMIADKEHGLPPVQQERAQMLRRNALRLQRLVNALLDFS 428 FFSN+SHEFRTPLTLMLGP+++ + D LPP Q++R M+ RN LRL +LVN LLDFS Sbjct: 404 FFSNISHEFRTPLTLMLGPVEEGLQDTGEPLPPRQRDRQLMVHRNGLRLLKLVNTLLDFS 463 Query: 429 RTQAGRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEETYVDPSMWEKIV 488 R +AGR +A Y DL+AFTADLAS FRS +E AGL+ +VDCP LA YVD M+EK+V Sbjct: 464 RIEAGRVKARYQPTDLSAFTADLASAFRSLMEKAGLSLQVDCPWLAAPVYVDREMYEKVV 523 Query: 489 LNLLSNAFKFTFAGKISVRLRGHGDHIRLTVSDTGVGIASDQLPLVFKRFHRIEGSQSRT 548 LNLLSNAFKFTF G + V LR D LTV+D+G GI +LP VF+RFHR+EG++ R+ Sbjct: 524 LNLLSNAFKFTFVGGVRVSLRAEADRAVLTVADSGTGIPEAELPHVFERFHRVEGARGRS 583 Query: 549 HEGSGIGLALVRDLVTLLGGTIGVDSDLELGSSFTLTIPSGRAHLPSERVVESLGPVNS- 607 +EGSGIGLAL+++LV L GGT+ V+S + GS FT+T+P G AHLP+E+V+ + P + Sbjct: 584 YEGSGIGLALIQELVRLHGGTLSVESAVGQGSRFTVTLPLGMAHLPAEQVMTTAAPATTG 643 Query: 608 -SLSPLGDAYAAEADRWSGARNGNTAEPEDAATAERNRANQVLS--ASARILVADDNADM 664 ++P + EA W + P +A + + S SARIL+ADDNAD+ Sbjct: 644 HGVAP----FVEEAALWV-EELPSAVVPAASALGVPASPSGLTSPGESARILLADDNADI 698 Query: 665 REYLSNLLQSH-WRVEAVGNGVEALESVRANPPDLILSDVMMPQLDGFGLLAALRSNDAS 723 R Y++ LL + W VE V +G AL +A+PP L+L+DVMMP+LDGFGLL AL++++ + Sbjct: 699 RGYVTQLLTAQGWTVETVPDGEAALARAQAHPPHLVLTDVMMPRLDGFGLLRALKAHEKT 758 Query: 724 KDIPFFLLSARSGEEARLEGLAAGADDYLVKPFSSRELIARIESMLLRSQIRAMEKRHAD 783 + +P LLSAR+GEEA +EG+ GADDYLVKPFS++EL++R+ + L ++ R+ + Sbjct: 759 QHVPVILLSARAGEEATVEGMQQGADDYLVKPFSAKELVSRVAARLEIARARSEAALAQE 818 Query: 784 RMATIFAQAPVAIAITRGPNHVFELANAPYQELVG--NRPIIGRSVRESLPEL-EGQTVL 840 R+ F QAP+A+++ RGP V+ELAN Y EL+G + + G+SVRE+LPEL E VL Sbjct: 819 RLHAQFMQAPIAMSVVRGPRFVYELANPLYLELLGRQGQALTGKSVREALPELPEDAPVL 878 Query: 841 DLLDNVYRTAEPYIGRSMGVRL-RRSPGEVDERFFDFVYQPMLKTDGSIEGIAVVAFEVT 899 +L++V+ +P++ V L R+ G+ ++ +F F QP+ DG + I VA +VT Sbjct: 879 KMLEDVFTQGKPFMAEEYCVPLDRKGTGQPEDVYFKFTCQPVRGADGQVTDIITVAVDVT 938 Query: 900 ELTRARARARA 910 E AR R+ A Sbjct: 939 EQVLARRRSEA 949 Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 152/527 (28%), Positives = 224/527 (42%), Gaps = 84/527 (15%) Query: 265 FAQALGAGGKTVVDVSGLDTLPLGPADQP---------------LRQAVMLPLQTPGQEH 309 + + LG G+ + S + LP P D P + + +PL G Sbjct: 848 YLELLGRQGQALTGKSVREALPELPEDAPVLKMLEDVFTQGKPFMAEEYCVPLDRKGTGQ 907 Query: 310 PLGVLI-CGVNPTRPLDEDYATFFNLLAGQVGMAIQNARSVEAE---KQRADLLAE---- 361 P V P R D GQV I A V + ++R++ LAE Sbjct: 908 PEDVYFKFTCQPVRGAD-----------GQVTDIITVAVDVTEQVLARRRSEALAEQLKL 956 Query: 362 LDQAKTTFFSNVSHEFRTPLTLMLGPLDDMIADKEHGLPPVQQERAQMLRRNALRLQRLV 421 DQ K F + ++HE R P+ + L M+ E + + R + RR L RLV Sbjct: 957 ADQRKDEFLAMLAHELRNPMAAISLALS-MLERSEGDTAKLARHR-ETARRQMGNLVRLV 1014 Query: 422 NALLDFSRTQAGRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEETYVDP 481 + LLD SR G+ + +DLA + + R IE G T V P + D Sbjct: 1015 DDLLDVSRITRGKMELRKETVDLAVLVQNALAVTRPLIEARGHTLSVALIPGPFQMTADA 1074 Query: 482 SMWEKIVLNLLSNAFKFTF-AGKISVRLRGHG----DHIRLTVSDTGVGIASDQLPLVFK 536 + E++V+NLL+NA K+T G++SV L G L V DTG GI D L VF+ Sbjct: 1075 TRLEQVVVNLLTNAAKYTEPGGRLSVSLSREGLNGTRQAVLRVKDTGRGIPRDMLGRVFE 1134 Query: 537 RFHRIEGSQSRTHEGSGIGLALVRDLVTLLGGTIGVDSDLE-LGSSFTLTIPSGRAHLPS 595 F ++ S R+ G G+GL LV+ LV + GG S GS FT+ +P +P Sbjct: 1135 LFVQVAPSLDRSTGGLGLGLTLVKRLVEMHGGHAEAFSQGPGQGSEFTVRLPLA---MPP 1191 Query: 596 ERVVESLGPVNSSLSPLGDAYAAEADRWSGARNGNTAEPEDAATAERNRANQVLSASARI 655 E A + P A A R + RI Sbjct: 1192 E-----------------------------AHEASEGAPPQAPAAFRKQ---------RI 1213 Query: 656 LVADDNADMREYLSNLLQS-HWRVEAVGNGVEALESVRANPPDLILSDVMMPQLDGFGLL 714 L+ +D+AD+R+ LS+ L+ V A +GVE +E + A PD+ L DV +P +DG+ + Sbjct: 1214 LLVEDSADIRDSLSDFLEELGHEVAAARDGVEGVEQLLALRPDVALIDVGLPGIDGYEVA 1273 Query: 715 AALRSNDASKDIPFFLLSARSGEEARLEGLAAGADDYLVKPFSSREL 761 +R+ + + L+ G EAR + AG D +L KP + EL Sbjct: 1274 RRVRAAPGGEQLYLVALTGYGGPEARAKAKRAGFDLHLTKPINIDEL 1320 >ref|YP_003957541.1| sensor protein [Stigmatella aurantiaca DW4/3-1] gb|ADO75714.1| Sensor protein [Stigmatella aurantiaca DW4/3-1] Length = 1311 Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/911 (45%), Positives = 577/911 (63%), Gaps = 38/911 (4%) Query: 13 LQGTGTLGQLILNHDWSASPLGPIDNWPQSLKTSISLMINSRQPMWLGWGEEATFFYNDA 72 L+G G G L+ + DWS + +GP+D WPQSL+T++ +++NS P+++ WG + YNDA Sbjct: 17 LRGGGECGALMRHVDWSKTAIGPVDQWPQSLRTAVGILLNSNYPLYIAWGPQYVQLYNDA 76 Query: 73 YIAVLSESKHPWALGRPVTEVWAEIWDICGPLADKVFQHAEATLVDDIRLFMNRDSGLEE 132 Y + +KHP ALG+ W E+W + GP DK+ EA V+++ + ++R+ +EE Sbjct: 77 YRPICGATKHPAALGQEAQVTWPEVWHLLGPGFDKIRSTGEANWVENLMMPLDRNGFVEE 136 Query: 133 NYFSFSYSPIRDESGKVGGLFCTNAEMTSKHLNARRLRTLSELAQRALVEKTASGAAATA 192 YF++S+SPI DE+G VGG+F E T + L+ARRL TL +L+ K+A A A Sbjct: 137 CYFTYSHSPILDETGGVGGIFAALTETTEQVLDARRLCTLKDLSANTADMKSAQAACEMA 196 Query: 193 AAILAQNPDDIPFALLYLTDCDRRQVRLEQSVHILPLSLVVPDSADVGHVDVDTTAVSHV 252 A +L+QNP D+PFALLYL D VRL + + P S P D+ D Sbjct: 197 ARVLSQNPHDVPFALLYLVAEDGHSVRLAGATGLQPGSAPAPAFIDLRGTDP-------- 248 Query: 253 GNDAKATPTFWPFAQALGAGGKTVVDVSGL----DTLPLGPADQPLRQAVMLPLQTPGQE 308 W + + AG T V + GL LP GP +P A+ LPL G+ Sbjct: 249 ----------WNLREVMRAG--TGVRLEGLAGRMGPLPGGPWPEPATTALALPLALAGRS 296 Query: 309 HPLGVLICGVNPTRPLDEDYATFFNLLAGQVGMAIQNARSVEAEKQRADLLAELDQAKTT 368 P G +I G +P LD+ Y +F L+ Q A+Q+AR+ E EKQRA+ LA+LDQAKT Sbjct: 297 QPSGAVILGASPRCALDDKYESFLKLVGAQAATAVQSARAFEEEKQRAEALAKLDQAKTA 356 Query: 369 FFSNVSHEFRTPLTLMLGPLDDMIADKEHGLPPVQQERAQMLRRNALRLQRLVNALLDFS 428 FFSN+SHEFRTPLTLMLGP+++ + D LPP Q++R M+ RN LRL +LVN LLDFS Sbjct: 357 FFSNISHEFRTPLTLMLGPVEEGLQDTGEPLPPRQRDRQLMVHRNGLRLLKLVNTLLDFS 416 Query: 429 RTQAGRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEETYVDPSMWEKIV 488 R +AGR +A Y DL+AFTADLAS FRS +E AGL+ +VDCP LA YVD M+EK+V Sbjct: 417 RIEAGRVKARYQPTDLSAFTADLASAFRSLMEKAGLSLQVDCPWLAAPVYVDREMYEKVV 476 Query: 489 LNLLSNAFKFTFAGKISVRLRGHGDHIRLTVSDTGVGIASDQLPLVFKRFHRIEGSQSRT 548 LNLLSNAFKFTF G + V LR D LTV+D+G GI +LP VF+RFHR+EG++ R+ Sbjct: 477 LNLLSNAFKFTFVGGVRVSLRAEADRAVLTVADSGTGIPEAELPHVFERFHRVEGARGRS 536 Query: 549 HEGSGIGLALVRDLVTLLGGTIGVDSDLELGSSFTLTIPSGRAHLPSERVVESLGPVNS- 607 +EGSGIGLAL+++LV L GGT+ V+S + GS FT+T+P G AHLP+E+V+ + P + Sbjct: 537 YEGSGIGLALIQELVRLHGGTLSVESAVGQGSRFTVTLPLGMAHLPAEQVMTTAAPATTG 596 Query: 608 -SLSPLGDAYAAEADRWSGARNGNTAEPEDAATAERNRANQVLS--ASARILVADDNADM 664 ++P + EA W + P +A + + S SARIL+ADDNAD+ Sbjct: 597 HGVAP----FVEEAALWV-EELPSAVVPAASALGVPASPSGLTSPGESARILLADDNADI 651 Query: 665 REYLSNLLQSH-WRVEAVGNGVEALESVRANPPDLILSDVMMPQLDGFGLLAALRSNDAS 723 R Y++ LL + W VE V +G AL +A+PP L+L+DVMMP+LDGFGLL AL++++ + Sbjct: 652 RGYVTQLLTAQGWTVETVPDGEAALARAQAHPPHLVLTDVMMPRLDGFGLLRALKAHEKT 711 Query: 724 KDIPFFLLSARSGEEARLEGLAAGADDYLVKPFSSRELIARIESMLLRSQIRAMEKRHAD 783 + +P LLSAR+GEEA +EG+ GADDYLVKPFS++EL++R+ + L ++ R+ + Sbjct: 712 QHVPVILLSARAGEEATVEGMQQGADDYLVKPFSAKELVSRVAARLEIARARSEAALAQE 771 Query: 784 RMATIFAQAPVAIAITRGPNHVFELANAPYQELVG--NRPIIGRSVRESLPEL-EGQTVL 840 R+ F QAP+A+++ RGP V+ELAN Y EL+G + + G+SVRE+LPEL E VL Sbjct: 772 RLHAQFMQAPIAMSVVRGPRFVYELANPLYLELLGRQGQALTGKSVREALPELPEDAPVL 831 Query: 841 DLLDNVYRTAEPYIGRSMGVRL-RRSPGEVDERFFDFVYQPMLKTDGSIEGIAVVAFEVT 899 +L++V+ +P++ V L R+ G+ ++ +F F QP+ DG + I VA +VT Sbjct: 832 KMLEDVFTQGKPFMAEEYCVPLDRKGTGQPEDVYFKFTCQPVRGADGQVTDIITVAVDVT 891 Query: 900 ELTRARARARA 910 E AR R+ A Sbjct: 892 EQVLARRRSEA 902 Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 152/527 (28%), Positives = 224/527 (42%), Gaps = 84/527 (15%) Query: 265 FAQALGAGGKTVVDVSGLDTLPLGPADQP---------------LRQAVMLPLQTPGQEH 309 + + LG G+ + S + LP P D P + + +PL G Sbjct: 801 YLELLGRQGQALTGKSVREALPELPEDAPVLKMLEDVFTQGKPFMAEEYCVPLDRKGTGQ 860 Query: 310 PLGVLI-CGVNPTRPLDEDYATFFNLLAGQVGMAIQNARSVEAE---KQRADLLAE---- 361 P V P R D GQV I A V + ++R++ LAE Sbjct: 861 PEDVYFKFTCQPVRGAD-----------GQVTDIITVAVDVTEQVLARRRSEALAEQLKL 909 Query: 362 LDQAKTTFFSNVSHEFRTPLTLMLGPLDDMIADKEHGLPPVQQERAQMLRRNALRLQRLV 421 DQ K F + ++HE R P+ + L M+ E + + R + RR L RLV Sbjct: 910 ADQRKDEFLAMLAHELRNPMAAISLALS-MLERSEGDTAKLARHR-ETARRQMGNLVRLV 967 Query: 422 NALLDFSRTQAGRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEETYVDP 481 + LLD SR G+ + +DLA + + R IE G T V P + D Sbjct: 968 DDLLDVSRITRGKMELRKETVDLAVLVQNALAVTRPLIEARGHTLSVALIPGPFQMTADA 1027 Query: 482 SMWEKIVLNLLSNAFKFTF-AGKISVRLRGHG----DHIRLTVSDTGVGIASDQLPLVFK 536 + E++V+NLL+NA K+T G++SV L G L V DTG GI D L VF+ Sbjct: 1028 TRLEQVVVNLLTNAAKYTEPGGRLSVSLSREGLNGTRQAVLRVKDTGRGIPRDMLGRVFE 1087 Query: 537 RFHRIEGSQSRTHEGSGIGLALVRDLVTLLGGTIGVDSDLE-LGSSFTLTIPSGRAHLPS 595 F ++ S R+ G G+GL LV+ LV + GG S GS FT+ +P +P Sbjct: 1088 LFVQVAPSLDRSTGGLGLGLTLVKRLVEMHGGHAEAFSQGPGQGSEFTVRLPLA---MPP 1144 Query: 596 ERVVESLGPVNSSLSPLGDAYAAEADRWSGARNGNTAEPEDAATAERNRANQVLSASARI 655 E A + P A A R + RI Sbjct: 1145 E-----------------------------AHEASEGAPPQAPAAFRKQ---------RI 1166 Query: 656 LVADDNADMREYLSNLLQS-HWRVEAVGNGVEALESVRANPPDLILSDVMMPQLDGFGLL 714 L+ +D+AD+R+ LS+ L+ V A +GVE +E + A PD+ L DV +P +DG+ + Sbjct: 1167 LLVEDSADIRDSLSDFLEELGHEVAAARDGVEGVEQLLALRPDVALIDVGLPGIDGYEVA 1226 Query: 715 AALRSNDASKDIPFFLLSARSGEEARLEGLAAGADDYLVKPFSSREL 761 +R+ + + L+ G EAR + AG D +L KP + EL Sbjct: 1227 RRVRAAPGGEQLYLVALTGYGGPEARAKAKRAGFDLHLTKPINIDEL 1273 >ref|YP_001611350.1| two-component hybrid sensor and regulator [Sorangium cellulosum 'So ce 56'] emb|CAN90870.1| two-component hybrid sensor and regulator [Sorangium cellulosum 'So ce 56'] Length = 1307 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/920 (45%), Positives = 567/920 (61%), Gaps = 27/920 (2%) Query: 3 LDAASTPYSFLQGTGTLGQLILNHDWSASPLGPIDNWPQSLKTSISLMINSRQPMWLGWG 62 LDA++ + L G G +G L+ + DW+ + LGP+ WP SLKT + L++ +R PM + G Sbjct: 23 LDASAE--ACLAGGGEMGALMRSIDWAKTRLGPVATWPISLKTVVGLVLGNRFPMIMLVG 80 Query: 63 EEATFFYNDAYIAVLSESKHPWALGRPVTEVWAEIWDICGPLADKVFQHAEATLVDDIRL 122 E YNDAY +L KHP ++G P EVWAE+WD+ GP+A V AT + + L Sbjct: 81 PELLQIYNDAYRPILG-MKHPASVGAPAAEVWAEVWDVVGPMAQGVLDGGPATWSEHLLL 139 Query: 123 FMNRDSGLEENYFSFSYSPIRDESGKVGGLFCTNAEMTSKHLNARRLRTLSELAQRALVE 182 + R +EE YF+ S+SPI ++ V G+ T E T + L+AR+L L +LA R+ Sbjct: 140 PVQRRGFVEETYFTLSFSPIPGDAEPVVGVLITVKETTEQVLDARQLHMLRDLATRSAQA 199 Query: 183 KTASGAAATAAAILAQNPDDIPFALLYLTDCDRRQVRLEQSVHILPLSLVVPDSADVGHV 242 K+A A TAA I A N D+PF+LLYL D D RL + + D + G Sbjct: 200 KSAEEACCTAAEIFAANDADLPFSLLYLLDGDPGDARLVGASGL--------DGYE-GAA 250 Query: 243 DVDTTAVSHVGNDAKATPTFWPFAQALGAGGKTVV-DVSG-LDTLPLGPADQPLRQAVML 300 ++ G++A A WP A+A G+ +V D++ LP+G QA++L Sbjct: 251 KPARVSLQDRGDEASA----WPLAEAARTSGELLVCDLAARFGALPVGRWGSAPEQAIVL 306 Query: 301 PLQTPGQEHPLGVLICGVNPTRPLDEDYATFFNLLAGQVGMAIQNARSVEAEKQRADLLA 360 PL PGQ P G L+ GV+P R LDE Y F L+ QV AI NAR+ E E++RA+ LA Sbjct: 307 PLSRPGQPRPYGFLVGGVSPHRLLDEPYRGLFQLITDQVVTAIANARAYEEERRRAEELA 366 Query: 361 ELDQAKTTFFSNVSHEFRTPLTLMLGPLDDMIADKEHGLPPVQQERAQMLRRNALRLQRL 420 +D AKT FFSNVSHEFRTPLTLMLGP++D +A E L E + RNALRL +L Sbjct: 367 AIDSAKTLFFSNVSHEFRTPLTLMLGPMEDALASPERAL---CGEHLSLAYRNALRLLKL 423 Query: 421 VNALLDFSRTQAGRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEETYVD 480 VNALLDFSR + GR QASY DLA T DLAS FRS IE AGL F+VDCP L E +VD Sbjct: 424 VNALLDFSRLEMGRAQASYDPTDLAGLTVDLASAFRSAIERAGLAFKVDCPELPEPVFVD 483 Query: 481 PSMWEKIVLNLLSNAFKFTFAGKISVRLRGHGDHIRLTVSDTGVGIASDQLPLVFKRFHR 540 MWEKIVLNLLSNA KFTF G+I + LR D + L V DTG GI +LP +F+RFHR Sbjct: 484 RDMWEKIVLNLLSNALKFTFDGEILLLLRAREDQVELVVRDTGTGIPEHELPHLFERFHR 543 Query: 541 IEGSQSRTHEGSGIGLALVRDLVTLLGGTIGVDSDLELGSSFTLTIPSGRAHLPSERV-- 598 ++G+++RTHEGSGIGLALV +LV L GG+I +S L G++FT+ IP G AHLP+ER+ Sbjct: 544 VQGARARTHEGSGIGLALVHELVRLHGGSIRAESRLGEGTAFTIAIPRGSAHLPAERIHA 603 Query: 599 VESLGPVNSSLSPLGDAYAAEADRWSGARNGNTAEPEDAATAERNRANQVLSASARILVA 658 ++L + +P Y EA RW A A E + + L SARIL+A Sbjct: 604 EKTLSSTATGAAP----YVEEALRWQLAAEAPALALASADRVESDHLSVPLDPSARILLA 659 Query: 659 DDNADMREYLSNLLQSHWRVEAVGNGVEALESVRANPPDLILSDVMMPQLDGFGLLAALR 718 DDNADMR Y+ +L + W VEAV +G AL+ R +PPDL+++DVMMP LDGFGLL ALR Sbjct: 660 DDNADMRMYVRRILDARWTVEAVSDGAAALDVARRSPPDLVIADVMMPGLDGFGLLRALR 719 Query: 719 SNDASKDIPFFLLSARSGEEARLEGLAAGADDYLVKPFSSRELIARIESMLLRSQIRAME 778 ++ ++ +P +LSAR+GEE+R+EGLAAGADDYLVKPFS+RELIAR+ + L + R Sbjct: 720 ADPVTRCVPVIMLSARAGEESRVEGLAAGADDYLVKPFSARELIARVATHLQLGEHRRAA 779 Query: 779 KRHADRMATIFAQAPVAIAITRGPNHVFELANAPYQELVGNRPIIGRSVRESLPELEGQT 838 +R +M +F QAPV IA+ RGP HV E+AN +VG+R +IGR++ ++ PE+ G Sbjct: 780 ERERGKMFALFEQAPVGIAVYRGPEHVIEMANPRLVAMVGHRDVIGRTLAQAFPEIVGSP 839 Query: 839 VLDLLDNVYRTAEPYIGRSMGVRLRRSPGEVDERFFDFVYQPMLKTDGSIEGIAVVAFEV 898 +L++ V+ + EP++ L R G +E ++ F PM + ++ I VVA +V Sbjct: 840 LLEVFHRVFASGEPFVTHDYRFDLERGDGVREELYWSFNLHPMREPGAAVARILVVALDV 899 Query: 899 TELTRARARARARGGARARL 918 T+ RAR + A R L Sbjct: 900 TDYVRARKKLEAAAREREEL 919 Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 121/424 (28%), Positives = 184/424 (43%), Gaps = 58/424 (13%) Query: 363 DQAKTTFFSNVSHEFRTPLTLMLGPLDDMIADKEHGLPPVQQERAQMLRRNALRLQRLVN 422 ++AK F + + HE R PL ++ L M + ++ER ++ R L LV+ Sbjct: 934 NRAKDEFLAMLGHELRNPLAPIVTALHLM---RLRAGGHAERERL-VIERQIKHLTALVD 989 Query: 423 ALLDFSRTQAGRTQASYVQIDLAAFTADLASTFRSTIEGAGLTFEVDCPPLAEETYVDPS 482 LLD SR G+ + +I++A A +E V P D + Sbjct: 990 DLLDVSRITRGKVELKKQRIEIADVVAKAVELASPLLEQRRHHLTVTVPSSGLAVEGDVT 1049 Query: 483 MWEKIVLNLLSNAFKFT-FAGKISVRLRGHGDHIRLTVSDTGVGIASDQLPLVFKRFHRI 541 ++V NLL+NA K+T G+I+VR + L+V D G+GIA + LP VF+RF + Sbjct: 1050 RLAQVVSNLLTNAAKYTESGGEIAVRAGRVEGEVALSVRDNGIGIAPEMLPSVFERFVQE 1109 Query: 542 EGSQSRTHEGSGIGLALVRDLVTLLGGTIGVDSDLE-LGSSFTLTIPSGRAHLPSERVVE 600 + R+ G G+GLA+V +L+ + GG + S+ GS FT+ +P+ Sbjct: 1110 RQALDRSQGGLGLGLAIVHNLIAMHGGRVSAHSEGRGRGSEFTIRLPAA----------- 1158 Query: 601 SLGPVNSSLSPLGDAYAAEAD--RWSGARNGNTAEPEDAATAERNRANQVLSASARILVA 658 D + EA RW G A P L RIL+ Sbjct: 1159 ------------ADVRSPEAGPARWMA---GTQATPS-------------LVDRRRILLV 1190 Query: 659 DDNADMREYLSNLLQSH-WRVEAVGNGVEALESVRANPPDLILSDVMMPQLDGFGLLAAL 717 DDN D E L+ L + + +G AL PD+ L D+ +P +DG+ L L Sbjct: 1191 DDNLDAVELLAESLGAMGYTTRVAPDGPSALRIAEEFAPDVALLDIGLPVMDGYELARRL 1250 Query: 718 RSNDASKDIPFFLLSARSGEEA---RLEGLAAGADDYLVKPFSSRELIARIESMLLRSQI 774 R A + + ++ G+EA R EG AG + +LVKP I R+ S+L Sbjct: 1251 REQPAGERVRLIAITG-YGQEADFRRSEG--AGFETHLVKPIQ----IERLTSLLEEPPA 1303 Query: 775 RAME 778 R E Sbjct: 1304 RGAE 1307