BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0030.p (198 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776091.1| GntR family transcription regulator protein ... 290 6e-77 ref|YP_004752359.1| putative GntR-family transcription regulator... 271 5e-71 ref|YP_001354254.1| GntR family transcriptional regulator [Janth... 261 3e-68 ref|YP_001099763.1| GntR family transcriptional regulator [Hermi... 256 2e-66 ref|ZP_08276091.1| Transcriptional regulator, GntR family [Oxalo... 254 5e-66 >ref|YP_003776091.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64183.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 290 bits (743), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 147/221 (66%), Positives = 164/221 (74%), Gaps = 36/221 (16%) Query: 1 MDTPKKRSETLRESIEELIAVGKLAPGQHLDETVLAEQFGVSRTPIREALIQLASMGIIV 60 MDTPK R+E LRESIEELIAV KL+PGQHLDET LAE+FGVSRTPIREALIQLASMGI+ Sbjct: 1 MDTPKTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE 60 Query: 61 MRPRRGA------------------------------------YGSLMAAHQACKDARDA 84 MRPRRGA + L+AAHQAC+ ARDA Sbjct: 61 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDA 120 Query: 85 VDPDTYFYKNEDFHGQIYAGSHNAFLEEQARVLQRRLRPYRRLQLRVRDRLKRSYDEHEG 144 DPD YFY NE FH IYAGSHN FL +QAR L RRLRPYRRLQLRVRDRLK S+DEH+ Sbjct: 121 NDPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQA 180 Query: 145 VVNAIIAGDSERTVELLRQHVMIQGQRFADLVASLHQLKLA 185 VV+AII+GD+E+TV+LLR+H+MIQGQRFADLVASLHQLK A Sbjct: 181 VVDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKSA 221 >ref|YP_004752359.1| putative GntR-family transcription regulator [Collimonas fungivorans Ter331] gb|AEK61536.1| putative GntR-family transcription regulator [Collimonas fungivorans Ter331] Length = 314 Score = 271 bits (692), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 140/222 (63%), Positives = 155/222 (69%), Gaps = 36/222 (16%) Query: 1 MDTPKKRSETLRESIEELIAVGKLAPGQHLDETVLAEQFGVSRTPIREALIQLASMGIIV 60 M T K RSE+LRE+IEE+IAVG+ PGQHLDET LA +FGVSRTP+REALIQLASMGI+V Sbjct: 86 MLTTKNRSESLRETIEEMIAVGEFRPGQHLDETDLAIKFGVSRTPVREALIQLASMGIVV 145 Query: 61 MRPRRGA------------------------------------YGSLMAAHQACKDARDA 84 RPRRG + SL+AAHQAC +ARDA Sbjct: 146 TRPRRGTVVAEIGPRQLVEMFEVMAELEAMCGRLAARRMSGEEHASLLAAHQACMEARDA 205 Query: 85 VDPDTYFYKNEDFHGQIYAGSHNAFLEEQARVLQRRLRPYRRLQLRVRDRLKRSYDEHEG 144 DPDTYFY NE FHG IY GSHNAFL QA+ LQRRLRPYRRLQLRVRDRLK SY EH+G Sbjct: 206 QDPDTYFYMNEAFHGAIYEGSHNAFLAAQAQSLQRRLRPYRRLQLRVRDRLKVSYQEHDG 265 Query: 145 VVNAIIAGDSERTVELLRQHVMIQGQRFADLVASLHQLKLAP 186 VV AIIAGDSE +LLRQHV +QGQRF DL+ASL QL P Sbjct: 266 VVQAIIAGDSELAADLLRQHVTVQGQRFVDLIASLQQLTAMP 307 >ref|YP_001354254.1| GntR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89258.1| transcriptional regulator, GntR family [Janthinobacterium sp. Marseille] Length = 229 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 135/218 (61%), Positives = 149/218 (68%), Gaps = 36/218 (16%) Query: 2 DTPKKRSETLRESIEELIAVGKLAPGQHLDETVLAEQFGVSRTPIREALIQLASMGIIVM 61 D + RSETLRE IEE+IAVG L PGQHLDETVLAE+FGVSRTPIREALIQLASMGI+V+ Sbjct: 9 DNTQTRSETLREQIEEMIAVGTLKPGQHLDETVLAERFGVSRTPIREALIQLASMGIVVI 68 Query: 62 RPRRGA------------------------------------YGSLMAAHQACKDARDAV 85 RPRRGA + LMA H ACK ARD Sbjct: 69 RPRRGAIVAEIGPQQLIEMFEVMAELEAMCARLAARRMSPAEHAILMATHLACKQARDDA 128 Query: 86 DPDTYFYKNEDFHGQIYAGSHNAFLEEQARVLQRRLRPYRRLQLRVRDRLKRSYDEHEGV 145 D D YFYKNE+FH QIY GS N FLEEQAR LQRRLRPYRRLQLRVR+R+ S+DEH V Sbjct: 129 DSDAYFYKNEEFHQQIYIGSKNTFLEEQARALQRRLRPYRRLQLRVRNRVTASFDEHGAV 188 Query: 146 VNAIIAGDSERTVELLRQHVMIQGQRFADLVASLHQLK 183 V+AII G + ELLRQH+MIQGQRF+DLVASL L Sbjct: 189 VDAIIEGKGDLAAELLRQHIMIQGQRFSDLVASLSALN 226 >ref|YP_001099763.1| GntR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61636.1| Transcriptional regulatory proteins, GntR family [Herminiimonas arsenicoxydans] Length = 220 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 131/211 (62%), Positives = 150/211 (71%), Gaps = 36/211 (17%) Query: 5 KKRSETLRESIEELIAVGKLAPGQHLDETVLAEQFGVSRTPIREALIQLASMGIIVMRPR 64 KK SE LRE+IEE+IAVGKL PG HLDET LA++FGVSRTPIREALIQLASMGIIV+RPR Sbjct: 2 KKHSEVLREAIEEMIAVGKLPPGHHLDETELAKEFGVSRTPIREALIQLASMGIIVIRPR 61 Query: 65 RGA------------------------------------YGSLMAAHQACKDARDAVDPD 88 RGA + +L A H AC++ARD+ D D Sbjct: 62 RGAIVAEIGPQQLIEMFEVMAELEAMCARLAARRMSPAGHATLKATHLACEEARDSADSD 121 Query: 89 TYFYKNEDFHGQIYAGSHNAFLEEQARVLQRRLRPYRRLQLRVRDRLKRSYDEHEGVVNA 148 YFYKNE+FH QIY GS N+FLEEQARVLQRRLRPYRRLQLRVR+R++ S+DEH VV+A Sbjct: 122 AYFYKNEEFHQQIYIGSQNSFLEEQARVLQRRLRPYRRLQLRVRNRVQASFDEHGAVVDA 181 Query: 149 IIAGDSERTVELLRQHVMIQGQRFADLVASL 179 II G E ELLRQH+MIQGQRF DL+ASL Sbjct: 182 IIEGKGELAAELLRQHIMIQGQRFTDLIASL 212 >ref|ZP_08276091.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] gb|EGF30438.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] Length = 237 Score = 254 bits (649), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 128/219 (58%), Positives = 149/219 (68%), Gaps = 40/219 (18%) Query: 1 MDTP----KKRSETLRESIEELIAVGKLAPGQHLDETVLAEQFGVSRTPIREALIQLASM 56 M+TP K RS +LRE+IEE+IA+G+L PG HLDETVLA +F VSRTPIREALIQLASM Sbjct: 1 MNTPNNPAKNRSSSLREAIEEMIAIGELPPGAHLDETVLANRFEVSRTPIREALIQLASM 60 Query: 57 GIIVMRPRRGA------------------------------------YGSLMAAHQACKD 80 G+IV+RPRRGA + ++ AH AC+ Sbjct: 61 GLIVIRPRRGAVVAEISPQQLVEMFEVMSEFEAMCGRLAARRMTPGEHQVMLTAHHACEQ 120 Query: 81 ARDAVDPDTYFYKNEDFHGQIYAGSHNAFLEEQARVLQRRLRPYRRLQLRVRDRLKRSYD 140 ARDA DPD YFYKNE FH +Y GSHN FL EQA L RRLRPYRRLQLRVR+R+ S++ Sbjct: 121 ARDAQDPDAYFYKNEAFHAALYKGSHNTFLTEQALALHRRLRPYRRLQLRVRNRIANSFN 180 Query: 141 EHEGVVNAIIAGDSERTVELLRQHVMIQGQRFADLVASL 179 EHE +VNAIIAGD E T LLR H+MIQGQRFADL+ASL Sbjct: 181 EHEAIVNAIIAGDGEMTATLLRNHIMIQGQRFADLIASL 219