BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0021.p         (60 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776098.1| hypothetical protein Hsero_2694 [Herbaspiril...    66   1e-09

>ref|YP_003776098.1| hypothetical protein Hsero_2694 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64190.1| hypothetical protein Hsero_2694 [Herbaspirillum seropedicae SmR1]
          Length = 78

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 2/60 (3%)

Query: 1  MEIASLATGVATAWLAKKAVEGIGLDLTKVANHVVDDVIG--LISPALPANPNIGRLINT 58
          ME+A++A+GVATAWLA KA   +G+DL K+A   VD+V+G   +   LP N NIGR+INT
Sbjct: 17 MEMATIASGVATAWLADKAAHAVGIDLGKIAKTTVDEVVGAATVVARLPGNVNIGRIINT 76