BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0039.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775911.1| glycogen synthase [Herbaspirillum seropedica... 331 1e-88 ref|YP_004230139.1| glycogen/starch synthase, ADP-glucose type [... 265 5e-69 ref|YP_554030.1| glycogen synthase [Burkholderia xenovorans LB40... 265 8e-69 ref|ZP_00945371.1| probable glycogen synthase, glgA [Ralstonia s... 263 3e-68 ref|YP_001889043.1| glycogen synthase [Burkholderia phytofirmans... 261 8e-68 >ref|YP_003775911.1| glycogen synthase [Herbaspirillum seropedicae SmR1] gb|ADJ64003.1| glycogen synthase protein [Herbaspirillum seropedicae SmR1] Length = 529 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 152/241 (63%), Positives = 193/241 (80%), Gaps = 1/241 (0%) Query: 1 VHANDWHAGLIPFLLKTAGLNHVASMLTIHNLAFQGNYDWALAGQLGLDRDAQAMSSLEY 60 VHANDWHAGLIP LLK GL+H+ +MLTIHNLAFQGN+ A Q+G+ + +EY Sbjct: 138 VHANDWHAGLIPCLLKLRGLDHIGTMLTIHNLAFQGNFALESAEQIGIPQHLLTGDGVEY 197 Query: 61 WGKISFLKAGLQHADCVTTVSKTYAQEILTPRFGYGMEGVLNERRAALRAIPNGIDSKVW 120 WGK+SFLKAG++ +DCV+TVS+ YA EI+TPRFG GM+G+L+ R+ LRAIPN ID+++W Sbjct: 198 WGKLSFLKAGIRFSDCVSTVSRNYAHEIMTPRFGCGMDGILSFRKLDLRAIPNAIDAELW 257 Query: 121 NPEADPLLRHSFNVGDMRGKTLSKCDLQDMFGLLPVDPFAPIVGIGSRMSHQKMADVVLQ 180 NP DPL+ +F+VG+M+GK K DLQ +FG LPVDPFAP++G+GSR+SHQKMADVV++ Sbjct: 258 NPADDPLIARNFSVGNMKGKAACKRDLQKLFG-LPVDPFAPVMGMGSRLSHQKMADVVIE 316 Query: 181 TLPTVLDRHERMQLVVLGCGERSYEEGFLDLACRYPGRVGVHIGYDEERAHALHAGCDML 240 LP +++RH RMQ+VVLGCG+ YE+ L LA RY GR+ VHIGYDE RAHALHAG DML Sbjct: 317 ALPGIMERHPRMQMVVLGCGDHDYEKSLLALAQRYAGRIAVHIGYDERRAHALHAGSDML 376 Query: 241 L 241 L Sbjct: 377 L 377 >ref|YP_004230139.1| glycogen/starch synthase, ADP-glucose type [Burkholderia sp. CCGE1001] gb|ADX57079.1| glycogen/starch synthase, ADP-glucose type [Burkholderia sp. CCGE1001] Length = 532 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 134/246 (54%), Positives = 174/246 (70%), Gaps = 7/246 (2%) Query: 1 VHANDWHAGLIPFLLKTAGLNHVASMLTIHNLAFQGNYDWALAGQLGLDRD--AQAMS-- 56 VHA+DWHAGL P ++ AG+ S+ TIHNLAFQGN+ A+ G +G+ + A+S Sbjct: 137 VHAHDWHAGLTPLYMRLAGVA-AKSVFTIHNLAFQGNHPLAMGGWIGVPPELLVPALSDE 195 Query: 57 -SLEYWGKISFLKAGLQHADCVTTVSKTYAQEILTPRFGYGMEGVLNERRAALRAIPNGI 115 S+EY+G +S +KAG+ HAD VTTVS+ YA+EILTPRFG+GMEGVL + A L I NGI Sbjct: 196 RSIEYYGSLSMMKAGIVHADRVTTVSQRYAREILTPRFGHGMEGVLQAQAAKLSGIVNGI 255 Query: 116 DSKVWNPEADPLLRHSFNVGDMRGKTLSKCDLQDMFGLLPVDPFAPIVGIGSRMSHQKMA 175 D+ +WNP AD + +++ D GK K DLQ FGL DPFAP+V IGSR++ QK+A Sbjct: 256 DTSMWNPAADAYIARPYSLDDTAGKQACKRDLQQAFGLT-RDPFAPLVAIGSRLTQQKLA 314 Query: 176 DVVLQTLPTVLDRHERMQLVVLGCGERSYEEGFLDLACRYPGRVGVHIGYDEERAHALHA 235 DVV + LP +L++H R+Q +LG GER+ EE +LA +PGRVGV IGYDE RAH LHA Sbjct: 315 DVVARALPVLLEQHPRLQFAILGEGERALEEALQELAAAWPGRVGVQIGYDERRAHMLHA 374 Query: 236 GCDMLL 241 G D+LL Sbjct: 375 GADILL 380 >ref|YP_554030.1| glycogen synthase [Burkholderia xenovorans LB400] gb|ABE34680.1| Starch (glycogen) synthase [Burkholderia xenovorans LB400] Length = 529 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 136/246 (55%), Positives = 173/246 (70%), Gaps = 7/246 (2%) Query: 1 VHANDWHAGLIPFLLKTAGLNHVASMLTIHNLAFQGNYDWALAGQLGLDRD--AQAMS-- 56 VHA+DWHAGL P L+ AG+ S+ TIHNLAFQGN+ A+ G +G+ + A A+S Sbjct: 137 VHAHDWHAGLTPLYLRLAGVA-ARSVFTIHNLAFQGNHPLAMGGWIGVPPELLAPALSDE 195 Query: 57 -SLEYWGKISFLKAGLQHADCVTTVSKTYAQEILTPRFGYGMEGVLNERRAALRAIPNGI 115 S+E++G +S +KAG+ HAD VTTVS+ YA+EILTPRFG+GMEGVL + A L I NGI Sbjct: 196 RSIEFYGSLSMMKAGIVHADRVTTVSRRYAREILTPRFGHGMEGVLQAQAAKLSGIVNGI 255 Query: 116 DSKVWNPEADPLLRHSFNVGDMRGKTLSKCDLQDMFGLLPVDPFAPIVGIGSRMSHQKMA 175 DS VWNP D + ++V D GK K DLQ FGL DPFAP+V IGSR++ QK+A Sbjct: 256 DSAVWNPATDKHIARPYSVDDTAGKQACKRDLQQAFGLT-RDPFAPLVAIGSRLTEQKLA 314 Query: 176 DVVLQTLPTVLDRHERMQLVVLGCGERSYEEGFLDLACRYPGRVGVHIGYDEERAHALHA 235 DVV+ TLP +L+RH R+Q +LG GE+ E+ +A +PGRVGV IGYDE RAH LHA Sbjct: 315 DVVVHTLPALLERHPRLQFAILGQGEQGIEQALQGIAAAWPGRVGVQIGYDERRAHMLHA 374 Query: 236 GCDMLL 241 G D+LL Sbjct: 375 GADILL 380 >ref|ZP_00945371.1| probable glycogen synthase, glgA [Ralstonia solanacearum UW551] ref|YP_002257195.1| glycogen synthase protein [Ralstonia solanacearum IPO1609] gb|EAP72123.1| probable glycogen synthase, glgA [Ralstonia solanacearum UW551] emb|CAQ59076.1| glycogen synthase protein [Ralstonia solanacearum IPO1609] Length = 533 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 134/241 (55%), Positives = 167/241 (69%), Gaps = 4/241 (1%) Query: 1 VHANDWHAGLIPFLLKTAGLNHVASMLTIHNLAFQGNYDWALAGQLGLDRDAQAMSSLEY 60 V A+DWHA L+P L+K AGL V ++LT+HNLAFQGN+ A+A ++G+ A+A EY Sbjct: 138 VQAHDWHAALVPLLVKRAGLP-VRTVLTVHNLAFQGNFPLAVASEIGVP--AEAAREAEY 194 Query: 61 WGKISFLKAGLQHADCVTTVSKTYAQEILTPRFGYGMEGVLNERRAALRAIPNGIDSKVW 120 +G+ SFLKAGL AD +TTVS+TYA+EILT FGYGM+ VL RR L AI NGID+ VW Sbjct: 195 FGRFSFLKAGLVSADRITTVSRTYAREILTDTFGYGMQDVLRARRHDLVAILNGIDNAVW 254 Query: 121 NPEADPLLRHSFNVGDMRGKTLSKCDLQDMFGLLPVDPFAPIVGIGSRMSHQKMADVVLQ 180 NP D LR F D+ GK +K LQ + LP D AP++ +GSR++HQKMADV LQ Sbjct: 255 NPSKDAYLRQPFFAADLSGKHAAKRQLQTLL-CLPHDAHAPLLALGSRLTHQKMADVALQ 313 Query: 181 TLPTVLDRHERMQLVVLGCGERSYEEGFLDLACRYPGRVGVHIGYDEERAHALHAGCDML 240 LP +L+ H R+Q+ VLGCGER YE G LA RYP R+ IGY E AH LHAG D+L Sbjct: 314 ALPQLLEAHPRLQVAVLGCGERRYESGMAALAARYPSRMAAMIGYTERNAHMLHAGADLL 373 Query: 241 L 241 L Sbjct: 374 L 374 >ref|YP_001889043.1| glycogen synthase [Burkholderia phytofirmans PsJN] gb|ACD19673.1| glycogen/starch synthase, ADP-glucose type [Burkholderia phytofirmans PsJN] Length = 533 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 133/246 (54%), Positives = 172/246 (69%), Gaps = 7/246 (2%) Query: 1 VHANDWHAGLIPFLLKTAGLNHVASMLTIHNLAFQGNYDWALAGQLGLDRD--AQAMS-- 56 VHA+DWHAGL P L+ AG+ S+ TIHNLAFQGN+ A+ G +G+ + A A+S Sbjct: 141 VHAHDWHAGLTPLYLRLAGVA-AKSVFTIHNLAFQGNHPLAMGGWIGVPPELLAPALSDE 199 Query: 57 -SLEYWGKISFLKAGLQHADCVTTVSKTYAQEILTPRFGYGMEGVLNERRAALRAIPNGI 115 S+E++G +S +KAG+ H+D VTTVS+ YA+EILTP FG+GMEGVL + A L I NGI Sbjct: 200 RSIEFYGSLSMMKAGIVHSDRVTTVSRRYAREILTPHFGHGMEGVLQAQAAKLSGIVNGI 259 Query: 116 DSKVWNPEADPLLRHSFNVGDMRGKTLSKCDLQDMFGLLPVDPFAPIVGIGSRMSHQKMA 175 D+ VWNP D + ++V D GK K +LQ FGL DPFAP+V IGSR++ QK+A Sbjct: 260 DTSVWNPATDKHIARPYSVDDTAGKQACKRELQQAFGLT-RDPFAPLVAIGSRLTEQKLA 318 Query: 176 DVVLQTLPTVLDRHERMQLVVLGCGERSYEEGFLDLACRYPGRVGVHIGYDEERAHALHA 235 DVV+ TLP +L+RH R+Q +LG GE E+ D+A +PGRVGV IGYDE RAH LHA Sbjct: 319 DVVVHTLPALLERHPRLQFAILGQGEPGLEQALQDVAAAWPGRVGVQIGYDERRAHMLHA 378 Query: 236 GCDMLL 241 G D+LL Sbjct: 379 GADILL 384