BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0029.p (304 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775907.1| 4-alpha-glucanotransferase [Herbaspirillum s... 311 1e-82 ref|YP_552479.1| glycoside hydrolase family protein [Burkholderi... 304 1e-80 ref|YP_004231360.1| 4-alpha-glucanotransferase [Burkholderia sp.... 304 1e-80 ref|YP_003909799.1| 4-alpha-glucanotransferase [Burkholderia sp.... 304 1e-80 ref|YP_001860549.1| 4-alpha-glucanotransferase [Burkholderia phy... 304 1e-80 >ref|YP_003775907.1| 4-alpha-glucanotransferase [Herbaspirillum seropedicae SmR1] gb|ADJ63999.1| 4-alpha-glucanotransferase protein [Herbaspirillum seropedicae SmR1] Length = 751 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 164/286 (57%), Positives = 203/286 (70%), Gaps = 21/286 (7%) Query: 1 MITGLSAGAPPDLLNTRGQNWGIGAFSPLAPLRAQGFRSYIAMLRSAFANAGGVRIDHVM 60 + GL+ GAPPD L GQNWG+GAFSPLA LR G+++Y+AMLR+ A GGVRIDHV+ Sbjct: 440 IAAGLTVGAPPDRLAPLGQNWGLGAFSPLA-LRRTGYQAYLAMLRACMAQGGGVRIDHVL 498 Query: 61 GLTRLWLAPEGGDANEGAYLRYPARDLLRLIALESWRHRAVVIGEDLGTVPEGFDAEIKD 120 GL RLWL P+G A GAY+ YP +D+LRLIALESWRHRAVVIGEDLGTVP GFD ++ + Sbjct: 499 GLNRLWLVPQGLGAQAGAYVAYPQQDMLRLIALESWRHRAVVIGEDLGTVPPGFDRDLAE 558 Query: 121 AGLLGIGVLWFQRDARANFLPPAQWPAHAIATTSTHDLPTVSGWWQGSDIGWRTRLDLLM 180 +G+ GI VLWFQRD + FLPPA+W A AI T+THDLPTV+GWW G+DI WR RL L Sbjct: 559 SGVAGIRVLWFQRD-KEGFLPPAEWSAQAIGVTTTHDLPTVAGWWTGADIAWRHRLGQLE 617 Query: 181 PGATDAQTRADRDEDRSLLWQALLDAECVVGDQP---AADA-----------PQDV---I 223 G A+ A R ++R LWQAL++ G P AA+A P++ + Sbjct: 618 EGRAAAE--AQRAKERDQLWQALVEQGWASGPVPQISAAEAEDLAQQALPPVPEECAIAV 675 Query: 224 DGAAAFIAQTPAPLALLPIEDLLGLEEQPNLPGTVDTHPNWQRRLP 269 D A F+A TPAPLA++P+ED+LGL +QPNLPG D HPNW+RRLP Sbjct: 676 DAALEFVAATPAPLAVVPVEDILGLVQQPNLPGLTDPHPNWRRRLP 721 >ref|YP_552479.1| glycoside hydrolase family protein [Burkholderia xenovorans LB400] gb|ABE33129.1| Glycoside hydrolase, family 77 [Burkholderia xenovorans LB400] Length = 736 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/290 (54%), Positives = 194/290 (66%), Gaps = 9/290 (3%) Query: 1 MITGLSAGAPPDLLNTRGQNWGIGAFSPLAPLRAQGFRSYIAMLRSAFANAGGVRIDHVM 60 M+ G+S GAPPDL N GQ WG+ FSP A +R QGF ++I MLR+AFA+AGG+RIDH++ Sbjct: 422 MLQGVSVGAPPDLFNQAGQAWGLTTFSPRA-MRMQGFSAFIDMLRAAFAHAGGIRIDHIL 480 Query: 61 GLTRLWLAPEGGDANEGAYLRYPARDLLRLIALESWRHRAVVIGEDLGTVPEGFDAEIKD 120 GL RLWL PEG A GAYLRYP DLLRLIALESWRHRA+VIGEDLGTVP GF +++ Sbjct: 481 GLRRLWLVPEGESARNGAYLRYPLEDLLRLIALESWRHRAIVIGEDLGTVPPGFRERLEE 540 Query: 121 AGLLGIGVLWFQ--RDARANFLPPAQWPAHAIATTSTHDLPTVSGWWQGSDIGWRTRLDL 178 G+ GI VLWF+ D + F PP W +A+ TT+THDLPTV+GWW+GSDI WR R+ Sbjct: 541 HGIAGIRVLWFESAHDGK-GFKPPRAWDRNAVGTTTTHDLPTVAGWWRGSDITWRNRIGQ 599 Query: 179 LMPGAT----DAQTRADRDEDRSLLWQALLDAECVVGDQPAADAPQDVIDGAAAFIAQTP 234 M A + + +R +DR+LLW A A D PA +D A AF+A TP Sbjct: 600 TMARADGRDPEEAAQEERAKDRALLWHAFQQAGVAAHDVPAPPPDSAPVDEALAFVAATP 659 Query: 235 APLALLPIEDLLGLEEQPNLPGTVDTHPNWQRRLPATAETLL-DHVDCRR 283 PL P+EDLL EQPNLPG++D HPNW+RR+ + L D C R Sbjct: 660 GPLVTFPLEDLLAQVEQPNLPGSIDEHPNWRRRVTLPVDELFQDDTFCDR 709 >ref|YP_004231360.1| 4-alpha-glucanotransferase [Burkholderia sp. CCGE1001] gb|ADX58300.1| 4-alpha-glucanotransferase [Burkholderia sp. CCGE1001] Length = 733 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 160/289 (55%), Positives = 194/289 (67%), Gaps = 7/289 (2%) Query: 1 MITGLSAGAPPDLLNTRGQNWGIGAFSPLAPLRAQGFRSYIAMLRSAFANAGGVRIDHVM 60 M+ G+S GAPPDL N GQ+WG+ FSP A +R QGF ++I MLR+AFA+AGG+RIDH++ Sbjct: 419 MLQGVSVGAPPDLFNQAGQSWGLTTFSPRA-MRTQGFSAFIDMLRAAFAHAGGIRIDHIL 477 Query: 61 GLTRLWLAPEGGDANEGAYLRYPARDLLRLIALESWRHRAVVIGEDLGTVPEGFDAEIKD 120 GL RLWL PEG A GAYLRYP DLLRLIALESWRHRA+VIGEDLGTVP GF + + Sbjct: 478 GLRRLWLVPEGESARNGAYLRYPLEDLLRLIALESWRHRAIVIGEDLGTVPPGFRERLDE 537 Query: 121 AGLLGIGVLWFQRDARAN-FLPPAQWPAHAIATTSTHDLPTVSGWWQGSDIGWRTRLDLL 179 G+ GI VLWF+RD + F PP W +A+ TT+THDLPTV+GWW GSDI WR R+ Sbjct: 538 HGIAGIRVLWFERDEDGSGFKPPQAWDRNAVGTTTTHDLPTVAGWWAGSDIAWRNRIGQT 597 Query: 180 M--PGATDAQTRA--DRDEDRSLLWQALLDAECVVGDQPAADAPQDVIDGAAAFIAQTPA 235 M P D + A +R DR+ LW+A A D PA +D A AF+A TP Sbjct: 598 MARPDGRDPEEAAQEERASDRAELWRAFQQAGVAAPDVPAPPPESPPVDEALAFVAATPG 657 Query: 236 PLALLPIEDLLGLEEQPNLPGTVDTHPNWQRRLP-ATAETLLDHVDCRR 283 PL P+EDLL EQPNLPG++D HPNW+RR+ E LD C R Sbjct: 658 PLVTFPLEDLLAHSEQPNLPGSIDEHPNWRRRMNLPIDEMFLDDTFCDR 706 >ref|YP_003909799.1| 4-alpha-glucanotransferase [Burkholderia sp. CCGE1003] gb|ADN60508.1| 4-alpha-glucanotransferase [Burkholderia sp. CCGE1003] Length = 736 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 158/289 (54%), Positives = 193/289 (66%), Gaps = 7/289 (2%) Query: 1 MITGLSAGAPPDLLNTRGQNWGIGAFSPLAPLRAQGFRSYIAMLRSAFANAGGVRIDHVM 60 M+ G+S GAPPDL N GQ+WG+ FSP A +R QGF ++I MLR+AFA+AGG+RIDH++ Sbjct: 422 MLQGVSVGAPPDLFNQAGQSWGLTTFSPRA-MRTQGFSAFIDMLRAAFAHAGGIRIDHIL 480 Query: 61 GLTRLWLAPEGGDANEGAYLRYPARDLLRLIALESWRHRAVVIGEDLGTVPEGFDAEIKD 120 GL RLWL PEG A+ GAYLRYP DLLRLIALESWRHRA+VIGEDLGTVP GF + + Sbjct: 481 GLRRLWLVPEGESASNGAYLRYPLEDLLRLIALESWRHRAIVIGEDLGTVPPGFRERLDE 540 Query: 121 AGLLGIGVLWFQR-DARANFLPPAQWPAHAIATTSTHDLPTVSGWWQGSDIGWRTRLDLL 179 G+ GI VLWF+R + F PP W +A+ TT+THDLPTV+GWW GSDI WR R+ Sbjct: 541 HGIAGIRVLWFERGEDGTGFKPPQAWDRNAVGTTTTHDLPTVAGWWAGSDITWRNRIGQT 600 Query: 180 M--PGATDAQTRA--DRDEDRSLLWQALLDAECVVGDQPAADAPQDVIDGAAAFIAQTPA 235 M P D + A +R DR+ LWQA A D A +D A AF+A TP Sbjct: 601 MARPDGRDPEEAAQEERASDRAELWQAFQQAGVAPPDVEAPPTDNAPVDEALAFVAATPG 660 Query: 236 PLALLPIEDLLGLEEQPNLPGTVDTHPNWQRRLP-ATAETLLDHVDCRR 283 PL P+EDLL +QPNLPG++D HPNW+RR+ E LD C R Sbjct: 661 PLVTFPLEDLLAQSDQPNLPGSIDEHPNWRRRMNLPIDEMFLDDTFCDR 709 >ref|YP_001860549.1| 4-alpha-glucanotransferase [Burkholderia phymatum STM815] gb|ACC73503.1| 4-alpha-glucanotransferase [Burkholderia phymatum STM815] Length = 726 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/302 (51%), Positives = 202/302 (66%), Gaps = 7/302 (2%) Query: 1 MITGLSAGAPPDLLNTRGQNWGIGAFSPLAPLRAQGFRSYIAMLRSAFANAGGVRIDHVM 60 M+ G+S GAPPDL N GQ WG+ FSP A +R QGF ++I MLR+AFA+AGG+RIDH++ Sbjct: 418 MLHGVSVGAPPDLFNQAGQAWGLTTFSPRA-MRTQGFSAFIDMLRAAFASAGGIRIDHIL 476 Query: 61 GLTRLWLAPEGGDANEGAYLRYPARDLLRLIALESWRHRAVVIGEDLGTVPEGFDAEIKD 120 GL RLWL PEG A GAYLRYP D+LRLIALESWRHRA+VIGEDLGTVP GF +++ Sbjct: 477 GLRRLWLVPEGQPAKNGAYLRYPLEDMLRLIALESWRHRAIVIGEDLGTVPPGFRERLRE 536 Query: 121 AGLLGIGVLWFQRDARAN-FLPPAQWPAHAIATTSTHDLPTVSGWWQGSDIGWRTRLDLL 179 GL GI VLWF+R F+ P++W A+ATT+THDLPTV+GWW+G DI WR R+ Sbjct: 537 HGLAGIRVLWFERTKDGKGFMAPSEWDRGAVATTTTHDLPTVTGWWRGEDIVWRNRVGQT 596 Query: 180 MPGATD----AQTRADRDEDRSLLWQALLDAECVVGDQPAADAPQDVIDGAAAFIAQTPA 235 A A +A+RD+DR+ LW+A A D +D A AF+A TP+ Sbjct: 597 AVRADGRDPVALAQAERDDDRAALWKAFQQAGIAAPDVEPPPPEDAPVDEALAFVAATPS 656 Query: 236 PLALLPIEDLLGLEEQPNLPGTVDTHPNWQRRLPATAETLL-DHVDCRRRMRLLQRTVHA 294 PL P+EDLLGL +QPNLPG++D HPNW+RR+ + L D C R + + Q + + Sbjct: 657 PLVTYPLEDLLGLADQPNLPGSIDEHPNWRRRVIQPVDALFADETFCDRLLAIEQARIDS 716 Query: 295 KN 296 + Sbjct: 717 TS 718