BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0013.p (183 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775879.1| hypothetical protein Hsero_2472 [Herbaspiril... 252 2e-65 ref|YP_001353296.1| hypothetical protein mma_1606 [Janthinobacte... 199 2e-49 ref|YP_970475.1| hypothetical protein Aave_2120 [Acidovorax citr... 125 4e-27 ref|YP_004235497.1| hypothetical protein Acav_3028 [Acidovorax a... 114 4e-24 ref|ZP_06841436.1| conserved hypothetical protein [Burkholderia ... 113 1e-23 >ref|YP_003775879.1| hypothetical protein Hsero_2472 [Herbaspirillum seropedicae SmR1] gb|ADJ63971.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 209 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 117/185 (63%), Positives = 145/185 (78%), Gaps = 3/185 (1%) Query: 2 LTQSAKDGFDTLLTQSLKSGMAPSGARVDISVLADDVGIPEKKMVVLTVSSYLFRLMAMF 61 ++ +A+DG D LL Q+L+S + PSG + VL D + EKKMVVLT+SSYLFR++ MF Sbjct: 25 VSAAARDGLDVLLQQALRSSLVPSGCQAAFEVLDDISHVQEKKMVVLTISSYLFRMVVMF 84 Query: 62 YFTPDAATRAHFARINNIDEAEMSEQTFMDAIAESGNLCCGILNRDLGNFFPHIGMSTPN 121 +FT DAATRAHFA ++N+ AEMSEQ +DAIAE GNLCCGI NR+LG +FPH+GMSTPN Sbjct: 85 HFTADAATRAHFASLHNVAAAEMSEQGLLDAIAECGNLCCGIFNRELGRYFPHLGMSTPN 144 Query: 122 VIDSNCAAYLQTLNCQHVRHFAVD---MDDAPRFHVTLSVSAYADIDFAVSAEELGSDTG 178 VID CAAYLQ LNC H+RHFA+D + ++PRFHV+L VSAYA +DFAV+AEE TG Sbjct: 145 VIDRQCAAYLQKLNCAHIRHFAIDLAELPESPRFHVSLCVSAYAPLDFAVAAEEQVDTTG 204 Query: 179 ELELF 183 ELELF Sbjct: 205 ELELF 209 >ref|YP_001353296.1| hypothetical protein mma_1606 [Janthinobacterium sp. Marseille] gb|ABR91287.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 183 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 94/183 (51%), Positives = 129/183 (70%) Query: 1 MLTQSAKDGFDTLLTQSLKSGMAPSGARVDISVLADDVGIPEKKMVVLTVSSYLFRLMAM 60 M++ A++GFD LL +SLK+ + + +I + + + E++ VVLTVSSYLFRLM M Sbjct: 1 MISPHAQEGFDLLLIRSLKASLPTAMENSEIGITTEVSELVEQEAVVLTVSSYLFRLMVM 60 Query: 61 FYFTPDAATRAHFARINNIDEAEMSEQTFMDAIAESGNLCCGILNRDLGNFFPHIGMSTP 120 +F DA T A+ A ++ + + Q F DAIAE GNL CGILNR+LG++FPHIGMSTP Sbjct: 61 IHFKQDAQTMAYMAGMHEVAAEDNDRQAFHDAIAEYGNLFCGILNRELGSYFPHIGMSTP 120 Query: 121 NVIDSNCAAYLQTLNCQHVRHFAVDMDDAPRFHVTLSVSAYADIDFAVSAEELGSDTGEL 180 N +D C +Y++ LNC H++HFAV ++ AP FHV+L VSAY DIDF V+ +E + TGEL Sbjct: 121 NFLDGQCMSYIEMLNCSHIQHFAVSVEGAPLFHVSLCVSAYDDIDFEVAEDEASASTGEL 180 Query: 181 ELF 183 ELF Sbjct: 181 ELF 183 >ref|YP_970475.1| hypothetical protein Aave_2120 [Acidovorax citrulli AAC00-1] gb|ABM32701.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 192 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 11/189 (5%) Query: 2 LTQSAKDGFDTLLTQSLKSGMA-PSGARVD-ISVLADDVGIPEKKMVVLTVSSYLFRLMA 59 L A+D D ++ +L+ +A SG V + L D G M VL+++S+ FR++A Sbjct: 8 LGPRARDSLDRMMVSALQQSVARGSGVAVQPVDALPDRDG--PTHMAVLSIASFSFRVVA 65 Query: 60 MFYFTPDAATRAHFARINNIDEAEMSEQTFMDAIAESGNLCCGILNRDLGNFFPHIGMST 119 +F A RA A+ +D A M +Q F+D I E GNLCCG +NRDLG F +G+ST Sbjct: 66 ALHFAHGPAWRAWVAQTAGLDAAGMGDQAFLDRICEMGNLCCGAINRDLGAFQAFLGLST 125 Query: 120 PNVIDSNCAAYLQTLNCQHVRHFAVDMDDAPRFHVTLSVSAYADIDF-----AVSAEELG 174 P ++D+ CA Y +HVRHF +D+ H +L AY DF A + E + Sbjct: 126 PQILDARCAPYFTRAGFEHVRHFRMDVRPDLALHASLCARAYVPQDFHWTGGAAAPEAVA 185 Query: 175 SDTGELELF 183 S GELELF Sbjct: 186 S--GELELF 192 >ref|YP_004235497.1| hypothetical protein Acav_3028 [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46930.1| hypothetical protein Acav_3028 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 196 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 2/183 (1%) Query: 2 LTQSAKDGFDTLLTQSLKSGMAPSGARVDISVLADDVGIPEKKMVVLTVSSYLFRLMAMF 61 ++ A+ D ++ +L+ + S A V + + M VL+++S+ FR++A Sbjct: 15 ISPRAQGSLDRMMVSALRQSVVRSDA-VAVQPMDALPATGATHMAVLSIASFSFRVVAAL 73 Query: 62 YFTPDAATRAHFARINNIDEAEMSEQTFMDAIAESGNLCCGILNRDLGNFFPHIGMSTPN 121 +F A R A ++ + S+Q F+D + E GNLC G +NRDLG F +G+STP Sbjct: 74 HFDHSPAWRGWVAEMSGQEAGPSSDQAFLDRVCEMGNLCSGAINRDLGGFQAFLGLSTPQ 133 Query: 122 VIDSNCAAYLQTLNCQHVRHFAVDMDDAPRFHVTLSVSAYADIDFAVSAEELGS-DTGEL 180 ++D+ CA Y +HVRHF +D+ H +L AYA +DF + E + ++GEL Sbjct: 134 ILDARCAPYFTRAGFEHVRHFRMDVRPDLSLHASLCARAYAPLDFHWAGPEPEAVESGEL 193 Query: 181 ELF 183 E+F Sbjct: 194 EMF 196 >ref|ZP_06841436.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG70962.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 180 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 109/186 (58%), Gaps = 9/186 (4%) Query: 1 MLTQSAKDGFDTLLTQSLKSGMA-PSGARVDISVLAD-DVGI-PEKKMVVLTVSSYLFRL 57 M++ AKD FD + ++ ++ + +G +I+ +AD VG+ + ++VVLT+SS +FRL Sbjct: 1 MISVHAKDSFDRIFRKAAQARLPLDAGDLCEIAPIADASVGVSKDTQVVVLTISSIVFRL 60 Query: 58 MAMFYFTPDAATRAHFARINNIDEAEMSEQTFMDAIAESGNLCCGILNRDLGNFFPHIGM 117 + + +F D +TRA++ + D A+ E+ F + E NLCCG +N++L +FP +GM Sbjct: 61 LLILHFDEDESTRAYYLK----DAAD--ERPFQEVFLEICNLCCGAMNQELLRYFPDLGM 114 Query: 118 STPNVIDSNCAAYLQTLNCQHVRHFAVDMDDAPRFHVTLSVSAYADIDFAVSAEELGSDT 177 STP V+++ C +L L + ++V ++ R T+ V AYA IDF L Sbjct: 115 STPYVLNARCLPHLHELKPGLLSSYSVTLNGTVRLAATVCVCAYAPIDFVADTSALEETG 174 Query: 178 GELELF 183 GELELF Sbjct: 175 GELELF 180