BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0007.p (402 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775925.1| hypothetical protein Hsero_2518 [Herbaspiril... 690 0.0 ref|YP_002495097.1| hypothetical protein Mnod_8503 [Methylobacte... 619 e-175 ref|YP_004750847.1| phosphoserine phosphatase [Collimonas fungiv... 585 e-165 ref|ZP_02906362.1| conserved hypothetical protein [Burkholderia ... 456 e-126 ref|YP_001115795.1| hypothetical protein Bcep1808_3341 [Burkhold... 456 e-126 >ref|YP_003775925.1| hypothetical protein Hsero_2518 [Herbaspirillum seropedicae SmR1] gb|ADJ64017.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 440 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/393 (81%), Positives = 354/393 (90%) Query: 8 GKAPVGLDRAKWAPRNREMVEQMIAAYGNTSRGYKSGKKPYAVFDWDNTSIMNDCEEALL 67 +A V LDRAKWA RN EMV QMIA +G + GY+S K+PYAVFDWDNTSIMNDCEEALL Sbjct: 45 ARAEVALDRAKWAARNHEMVAQMIAEHGKLAAGYQSSKRPYAVFDWDNTSIMNDCEEALL 104 Query: 68 MHQINTLSFKLTPAEFSAIIRQNVPPGPFTADFKNAAGKVVDLDSICADLDADYAFLHAN 127 MHQINTLSFKLTPAEFSAI RQNVPPGPF+ DFKNAAG+VVDL++ICADLDADYAFL+AN Sbjct: 105 MHQINTLSFKLTPAEFSAITRQNVPPGPFSKDFKNAAGEVVDLEAICADLDADYAFLYAN 164 Query: 128 YKGFAGTRSLEDISTTSEFLDFRAKLYYLYEAVNDTHGVNVGYPWVIYFFANMTVAEVSA 187 YKG AG++SLE++S T EF DFRAKLYYLYEAVNDTHGV VGYPWVIYFFANM+VAEVSA Sbjct: 165 YKGMAGSKSLEEVSATPEFQDFRAKLYYLYEAVNDTHGVAVGYPWVIYFFANMSVAEVSA 224 Query: 188 LAEASNDAALGAALAKVKYTSPADRPGKAGVVSVGHFHGIRLCTEIGGMMDTFRDHGIDI 247 LAEASNDAALGAAL KVKYTSPA RPG+AGVVSV HFHGIRLCTEI +MD R +GID+ Sbjct: 225 LAEASNDAALGAALTKVKYTSPAQRPGRAGVVSVSHFHGIRLCTEIATLMDALRRNGIDV 284 Query: 248 YVCTASLEDVVAVFATNPKYGYNVARENIIGLRLERDGSIYKNAYLKNWPLTWGPGKTVA 307 YVCTASLE+VVAVFAT+PKYGY+V+R+NIIGLRLER+G + +NAYLK+WPLTWGPGKTVA Sbjct: 285 YVCTASLEEVVAVFATHPKYGYHVSRDNIIGLRLERNGQVLRNAYLKDWPLTWGPGKTVA 344 Query: 308 IKSELVAAKGYGPIFVAGDSDGDYDMLRDFADTRYGLIVNRMKNGKIGELSKLAATQITA 367 I+ LVA KGYGP+FVAGDSDGDYDMLRDF +TRYG IVNRMKNGKIGELSKLAA QI A Sbjct: 345 IRQVLVAQKGYGPLFVAGDSDGDYDMLRDFPETRYGFIVNRMKNGKIGELSKLAAEQINA 404 Query: 368 GQPRFLLQGRQESTGNWLPVETSIKYGKTTPLL 400 G+PRFLLQGRQESTGNWLP E SIKYGKT P L Sbjct: 405 GRPRFLLQGRQESTGNWLPAEASIKYGKTAPQL 437 >ref|YP_002495097.1| hypothetical protein Mnod_8503 [Methylobacterium nodulans ORS 2060] gb|ACL62605.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 433 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 289/389 (74%), Positives = 328/389 (84%) Query: 12 VGLDRAKWAPRNREMVEQMIAAYGNTSRGYKSGKKPYAVFDWDNTSIMNDCEEALLMHQI 71 VGLDRAKWAPRN V ++IA +GNTS Y G++PYAVFDWDNTSIMNDC+EALLM+QI Sbjct: 43 VGLDRAKWAPRNHAAVSRLIAEHGNTSPNYNPGRRPYAVFDWDNTSIMNDCQEALLMYQI 102 Query: 72 NTLSFKLTPAEFSAIIRQNVPPGPFTADFKNAAGKVVDLDSICADLDADYAFLHANYKGF 131 NTLSFKLTPAEF+ IIRQNVPPG F+ D+KNAAG VDLD+ICADLDADY +LH YKG Sbjct: 103 NTLSFKLTPAEFAEIIRQNVPPGKFSDDYKNAAGTTVDLDAICADLDADYMWLHGAYKGL 162 Query: 132 AGTRSLEDISTTSEFLDFRAKLYYLYEAVNDTHGVNVGYPWVIYFFANMTVAEVSALAEA 191 +G++ L DI T+ F DFRAKLY+LYEAVNDTHGV++GYPWVIY NMTV +VS LAEA Sbjct: 163 SGSQPLADIVKTAHFEDFRAKLYFLYEAVNDTHGVDIGYPWVIYLLTNMTVPDVSRLAEA 222 Query: 192 SNDAALGAALAKVKYTSPADRPGKAGVVSVGHFHGIRLCTEIGGMMDTFRDHGIDIYVCT 251 SNDAALGAAL + KYTSP DR G+AGVVSV HFHGIRLCTE+GG+MDT + +GID+YV T Sbjct: 223 SNDAALGAALVRTKYTSPVDRAGRAGVVSVSHFHGIRLCTEVGGLMDTLQRNGIDVYVST 282 Query: 252 ASLEDVVAVFATNPKYGYNVARENIIGLRLERDGSIYKNAYLKNWPLTWGPGKTVAIKSE 311 ASLEDVVAVFAT PKYGYN+ R +++GLRLE++G ++KNAY K WPL WGPGKT IK E Sbjct: 283 ASLEDVVAVFATFPKYGYNIQRSHVLGLRLEQEGDVFKNAYRKGWPLNWGPGKTAVIKRE 342 Query: 312 LVAAKGYGPIFVAGDSDGDYDMLRDFADTRYGLIVNRMKNGKIGELSKLAATQITAGQPR 371 LV+ KGYGPI VAGDSDGDYDMLRDFADTR GLIVNRMK GKIGELSK AA + A PR Sbjct: 343 LVSKKGYGPILVAGDSDGDYDMLRDFADTRVGLIVNRMKKGKIGELSKAAADTLHAEAPR 402 Query: 372 FLLQGRQESTGNWLPVETSIKYGKTTPLL 400 FLLQGRQE+TGNW P E+SIKYGKT P L Sbjct: 403 FLLQGRQETTGNWRPQESSIKYGKTEPQL 431 >ref|YP_004750847.1| phosphoserine phosphatase [Collimonas fungivorans Ter331] gb|AEK60024.1| Phosphoserine phosphatase [Collimonas fungivorans Ter331] Length = 538 Score = 585 bits (1507), Expect = e-165, Method: Compositional matrix adjust. Identities = 275/393 (69%), Positives = 317/393 (80%), Gaps = 1/393 (0%) Query: 5 AKTGKAP-VGLDRAKWAPRNREMVEQMIAAYGNTSRGYKSGKKPYAVFDWDNTSIMNDCE 63 AK KA + LDRAKW RN + ++ ++A GN+S GY ++PYAVFDWDNTSIMND E Sbjct: 140 AKDSKAAGLALDRAKWGTRNHQQLQALLARNGNSSAGYNPKRRPYAVFDWDNTSIMNDTE 199 Query: 64 EALLMHQINTLSFKLTPAEFSAIIRQNVPPGPFTADFKNAAGKVVDLDSICADLDADYAF 123 EALLM+QINTLSFKL+P E AIIRQNVP GPF ADFKNAAGK VDL++IC+D+D DY + Sbjct: 200 EALLMYQINTLSFKLSPQEMGAIIRQNVPAGPFAADFKNAAGKAVDLEAICSDIDDDYQY 259 Query: 124 LHANYKGFAGTRSLEDISTTSEFLDFRAKLYYLYEAVNDTHGVNVGYPWVIYFFANMTVA 183 L+ NY+ G+R LE+I T++F DFRAKLYYLYEAVN+T+GVNVGYPWVIYFF NM+VA Sbjct: 260 LYDNYEKLNGSRKLEEIRETAQFQDFRAKLYYLYEAVNETYGVNVGYPWVIYFFTNMSVA 319 Query: 184 EVSALAEASNDAALGAALAKVKYTSPADRPGKAGVVSVGHFHGIRLCTEIGGMMDTFRDH 243 EV LAEASND LG L K KYTSPA +PG+AG+VSV HFHGIRLCTEI +MD + Sbjct: 320 EVQQLAEASNDHNLGLGLVKTKYTSPAAQPGQAGIVSVTHFHGIRLCTEIATLMDALQQS 379 Query: 244 GIDIYVCTASLEDVVAVFATNPKYGYNVARENIIGLRLERDGSIYKNAYLKNWPLTWGPG 303 GID+YV +ASLEDVVAVFAT PKYGYNV RE+++GLRLE ++ N Y WPL WGPG Sbjct: 380 GIDVYVSSASLEDVVAVFATTPKYGYNVKREHVLGLRLETANGVFVNRYKAGWPLNWGPG 439 Query: 304 KTVAIKSELVAAKGYGPIFVAGDSDGDYDMLRDFADTRYGLIVNRMKNGKIGELSKLAAT 363 KT IK ELVAAKGYGP+FVAGDSDGDYDMLRDFADT+ G+IVNRMK GKIG+LSKLAA Sbjct: 440 KTEVIKKELVAAKGYGPVFVAGDSDGDYDMLRDFADTQLGMIVNRMKKGKIGDLSKLAAD 499 Query: 364 QITAGQPRFLLQGRQESTGNWLPVETSIKYGKT 396 QI A PRFLLQGR E TGNW+P E SIKYGKT Sbjct: 500 QIPAKSPRFLLQGRNELTGNWMPSEASIKYGKT 532 >ref|ZP_02906362.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5] gb|EDT42486.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5] Length = 425 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 222/394 (56%), Positives = 279/394 (70%) Query: 3 AQAKTGKAPVGLDRAKWAPRNREMVEQMIAAYGNTSRGYKSGKKPYAVFDWDNTSIMNDC 62 A AK+ AP LD +W+P N ++ ++ +G S Y ++PYAVFDWDNT IMNDC Sbjct: 26 AGAKSATAPDALDPGRWSPFNAARLQAVLDQHGVASARYDGKRRPYAVFDWDNTCIMNDC 85 Query: 63 EEALLMHQINTLSFKLTPAEFSAIIRQNVPPGPFTADFKNAAGKVVDLDSICADLDADYA 122 EEALLM+QIN L +KLTP EF A++ ++VP G F D+ GK V ++ + AD+++DY Sbjct: 86 EEALLMYQINHLQYKLTPDEFVAVMWKDVPKGAFMKDYTTVDGKPVTMEDLAADVESDYR 145 Query: 123 FLHANYKGFAGTRSLEDISTTSEFLDFRAKLYYLYEAVNDTHGVNVGYPWVIYFFANMTV 182 +LHANYKGF G +SL++I T +F DFRAKLY++Y+A+ DTH + VGY W+IYF+ NMT Sbjct: 146 WLHANYKGFGGDKSLDEIRETDQFKDFRAKLYFMYDAICDTHPLEVGYKWIIYFYKNMTT 205 Query: 183 AEVSALAEASNDAALGAALAKVKYTSPADRPGKAGVVSVGHFHGIRLCTEIGGMMDTFRD 242 AE+ A+AEASN+ +G AL KV+Y SP PGKAGVV+ HFHGIR+ EI +M T R Sbjct: 206 AELQAMAEASNNYGIGDALRKVRYESPKTLPGKAGVVADTHFHGIRIHEEIRAVMHTLRA 265 Query: 243 HGIDIYVCTASLEDVVAVFATNPKYGYNVARENIIGLRLERDGSIYKNAYLKNWPLTWGP 302 +GID+YV TASL+DVV VFA NP YGY V EN+IGLRL+ Y + Y W WGP Sbjct: 266 NGIDVYVSTASLDDVVRVFAGNPNYGYGVPPENVIGLRLDMQDGKYTSTYPAGWHFNWGP 325 Query: 303 GKTVAIKSELVAAKGYGPIFVAGDSDGDYDMLRDFADTRYGLIVNRMKNGKIGELSKLAA 362 GKTV I++ LV+ KGYGP+ V GDSDGD MLRDF DT G+IVNRMK G+IG SKLA+ Sbjct: 326 GKTVGIRNVLVSKKGYGPVLVFGDSDGDAWMLRDFKDTAAGVIVNRMKKGEIGADSKLAS 385 Query: 363 TQITAGQPRFLLQGRQESTGNWLPVETSIKYGKT 396 QI RFLLQGR E TG +P E SIKYGKT Sbjct: 386 EQIGNPDARFLLQGRDEHTGLMIPDEKSIKYGKT 419 >ref|YP_001115795.1| hypothetical protein Bcep1808_3341 [Burkholderia vietnamiensis G4] gb|ABO56330.1| conserved hypothetical protein [Burkholderia vietnamiensis G4] Length = 425 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 220/394 (55%), Positives = 280/394 (71%) Query: 3 AQAKTGKAPVGLDRAKWAPRNREMVEQMIAAYGNTSRGYKSGKKPYAVFDWDNTSIMNDC 62 A AK+ AP LD +W+P N ++ ++ +G S GY + ++PYAVFDWDNT IMNDC Sbjct: 26 AGAKSATAPDALDPGRWSPFNAARLQTVLDRHGVASAGYDAKRRPYAVFDWDNTCIMNDC 85 Query: 63 EEALLMHQINTLSFKLTPAEFSAIIRQNVPPGPFTADFKNAAGKVVDLDSICADLDADYA 122 EEALLM+QIN L +KLTP EF ++ ++VP G F D+ GK V ++ + AD+++DY Sbjct: 86 EEALLMYQINHLQYKLTPDEFVGVMWKDVPKGAFMKDYTTVDGKPVTMEDLAADVESDYR 145 Query: 123 FLHANYKGFAGTRSLEDISTTSEFLDFRAKLYYLYEAVNDTHGVNVGYPWVIYFFANMTV 182 +LHANY+GF G +SL++I T +F DFRAKLY++Y+A+ DTH + VGY W+IYF+ NMT Sbjct: 146 WLHANYQGFGGDKSLDEIRETDQFKDFRAKLYFMYDAICDTHPLEVGYKWIIYFYKNMTT 205 Query: 183 AEVSALAEASNDAALGAALAKVKYTSPADRPGKAGVVSVGHFHGIRLCTEIGGMMDTFRD 242 AE+ A+A+ASN+ +G AL KV+Y SP PGKAGVV+ HFHGIR+ EI +M T R Sbjct: 206 AELQAMAQASNNYGIGDALRKVRYESPKALPGKAGVVADTHFHGIRIHEEIRSVMHTLRA 265 Query: 243 HGIDIYVCTASLEDVVAVFATNPKYGYNVARENIIGLRLERDGSIYKNAYLKNWPLTWGP 302 +GID+YV TASL+DVV VFA NP YGY VA EN+IGLRL+ Y + Y W WGP Sbjct: 266 NGIDVYVSTASLDDVVRVFAGNPNYGYGVAPENVIGLRLDMQDGKYTSTYPAGWHFNWGP 325 Query: 303 GKTVAIKSELVAAKGYGPIFVAGDSDGDYDMLRDFADTRYGLIVNRMKNGKIGELSKLAA 362 GKTV I++ L + KGYGP+ V GDSDGD MLRDF DT G+IVNRMK G+IG SKLA+ Sbjct: 326 GKTVGIRNVLASKKGYGPLLVFGDSDGDAWMLRDFKDTAAGVIVNRMKKGEIGADSKLAS 385 Query: 363 TQITAGQPRFLLQGRQESTGNWLPVETSIKYGKT 396 QI RFLLQGR E TG +P E SIKYGKT Sbjct: 386 EQIGNPDARFLLQGRDEHTGLMIPDEKSIKYGKT 419