BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0006.p (185 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775925.1| hypothetical protein Hsero_2518 [Herbaspiril... 322 1e-86 ref|YP_002495097.1| hypothetical protein Mnod_8503 [Methylobacte... 295 2e-78 ref|YP_004750847.1| phosphoserine phosphatase [Collimonas fungiv... 281 3e-74 ref|ZP_02462525.1| Tat (twin-arginine translocation) pathway sig... 211 4e-53 ref|YP_776275.1| phosphoserine phosphatase [Burkholderia ambifar... 211 4e-53 >ref|YP_003775925.1| hypothetical protein Hsero_2518 [Herbaspirillum seropedicae SmR1] gb|ADJ64017.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 440 Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 148/183 (80%), Positives = 164/183 (89%) Query: 1 VVSVGHFHGIRLCTEIGGMMDTFRDHGIDIYVCTASLEDVVAVFATNPKYGYNVARENII 60 VVSV HFHGIRLCTEI +MD R +GID+YVCTASLE+VVAVFAT+PKYGY+V+R+NII Sbjct: 255 VVSVSHFHGIRLCTEIATLMDALRRNGIDVYVCTASLEEVVAVFATHPKYGYHVSRDNII 314 Query: 61 GLRLERDGSIYKNAYLKNWPLTWGPGKTVAIKSELVAAKGYGPIFVAGDSDGDYDMLRDF 120 GLRLER+G + +NAYLK+WPLTWGPGKTVAI+ LVA KGYGP+FVAGDSDGDYDMLRDF Sbjct: 315 GLRLERNGQVLRNAYLKDWPLTWGPGKTVAIRQVLVAQKGYGPLFVAGDSDGDYDMLRDF 374 Query: 121 ADTRYGLIVNRMKNGKIGELSKLAATQITAGQPRFLLQGRQESTGNWLPVETSIKYGKTT 180 +TRYG IVNRMKNGKIGELSKLAA QI AG+PRFLLQGRQESTGNWLP E SIKYGKT Sbjct: 375 PETRYGFIVNRMKNGKIGELSKLAAEQINAGRPRFLLQGRQESTGNWLPAEASIKYGKTA 434 Query: 181 PLL 183 P L Sbjct: 435 PQL 437 >ref|YP_002495097.1| hypothetical protein Mnod_8503 [Methylobacterium nodulans ORS 2060] gb|ACL62605.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 433 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 138/183 (75%), Positives = 155/183 (84%) Query: 1 VVSVGHFHGIRLCTEIGGMMDTFRDHGIDIYVCTASLEDVVAVFATNPKYGYNVARENII 60 VVSV HFHGIRLCTE+GG+MDT + +GID+YV TASLEDVVAVFAT PKYGYN+ R +++ Sbjct: 249 VVSVSHFHGIRLCTEVGGLMDTLQRNGIDVYVSTASLEDVVAVFATFPKYGYNIQRSHVL 308 Query: 61 GLRLERDGSIYKNAYLKNWPLTWGPGKTVAIKSELVAAKGYGPIFVAGDSDGDYDMLRDF 120 GLRLE++G ++KNAY K WPL WGPGKT IK ELV+ KGYGPI VAGDSDGDYDMLRDF Sbjct: 309 GLRLEQEGDVFKNAYRKGWPLNWGPGKTAVIKRELVSKKGYGPILVAGDSDGDYDMLRDF 368 Query: 121 ADTRYGLIVNRMKNGKIGELSKLAATQITAGQPRFLLQGRQESTGNWLPVETSIKYGKTT 180 ADTR GLIVNRMK GKIGELSK AA + A PRFLLQGRQE+TGNW P E+SIKYGKT Sbjct: 369 ADTRVGLIVNRMKKGKIGELSKAAADTLHAEAPRFLLQGRQETTGNWRPQESSIKYGKTE 428 Query: 181 PLL 183 P L Sbjct: 429 PQL 431 >ref|YP_004750847.1| phosphoserine phosphatase [Collimonas fungivorans Ter331] gb|AEK60024.1| Phosphoserine phosphatase [Collimonas fungivorans Ter331] Length = 538 Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 131/179 (73%), Positives = 146/179 (81%) Query: 1 VVSVGHFHGIRLCTEIGGMMDTFRDHGIDIYVCTASLEDVVAVFATNPKYGYNVARENII 60 +VSV HFHGIRLCTEI +MD + GID+YV +ASLEDVVAVFAT PKYGYNV RE+++ Sbjct: 354 IVSVTHFHGIRLCTEIATLMDALQQSGIDVYVSSASLEDVVAVFATTPKYGYNVKREHVL 413 Query: 61 GLRLERDGSIYKNAYLKNWPLTWGPGKTVAIKSELVAAKGYGPIFVAGDSDGDYDMLRDF 120 GLRLE ++ N Y WPL WGPGKT IK ELVAAKGYGP+FVAGDSDGDYDMLRDF Sbjct: 414 GLRLETANGVFVNRYKAGWPLNWGPGKTEVIKKELVAAKGYGPVFVAGDSDGDYDMLRDF 473 Query: 121 ADTRYGLIVNRMKNGKIGELSKLAATQITAGQPRFLLQGRQESTGNWLPVETSIKYGKT 179 ADT+ G+IVNRMK GKIG+LSKLAA QI A PRFLLQGR E TGNW+P E SIKYGKT Sbjct: 474 ADTQLGMIVNRMKKGKIGDLSKLAADQIPAKSPRFLLQGRNELTGNWMPSEASIKYGKT 532 >ref|ZP_02462525.1| Tat (twin-arginine translocation) pathway signal sequence domain protein [Burkholderia thailandensis MSMB43] Length = 388 Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 106/183 (57%), Positives = 129/183 (70%) Query: 1 VVSVGHFHGIRLCTEIGGMMDTFRDHGIDIYVCTASLEDVVAVFATNPKYGYNVARENII 60 V++ HFHGIR+ EI +MDT R +GID+Y+ TASL+DVV VFA +P +GY V EN+I Sbjct: 204 VIAATHFHGIRIHEEIRAVMDTLRSNGIDVYISTASLDDVVRVFAGHPAFGYGVPAENVI 263 Query: 61 GLRLERDGSIYKNAYLKNWPLTWGPGKTVAIKSELVAAKGYGPIFVAGDSDGDYDMLRDF 120 G+RL Y N YL NW +GPGKTV I+ EL + KGYGP+FV GDSDGD MLRDF Sbjct: 264 GMRLVMADGKYVNEYLPNWHFNYGPGKTVGIRRELESKKGYGPLFVFGDSDGDAWMLRDF 323 Query: 121 ADTRYGLIVNRMKNGKIGELSKLAATQITAGQPRFLLQGRQESTGNWLPVETSIKYGKTT 180 ADT G+IVNRMK G+IG S++AA QI A R +LQGR E+TG + E SIKYGK Sbjct: 324 ADTAVGVIVNRMKKGEIGLDSRMAAEQIGAANARLVLQGRDENTGLMVADERSIKYGKRE 383 Query: 181 PLL 183 P L Sbjct: 384 PKL 386 >ref|YP_776275.1| phosphoserine phosphatase [Burkholderia ambifaria AMMD] gb|ABI89941.1| Phosphoserine phosphatase [Burkholderia ambifaria AMMD] Length = 425 Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 109/179 (60%), Positives = 125/179 (69%) Query: 1 VVSVGHFHGIRLCTEIGGMMDTFRDHGIDIYVCTASLEDVVAVFATNPKYGYNVARENII 60 VV+ HFHGIR+ EI +M T R +GID+YV TASL+DVV VFA NP YGY VA EN+I Sbjct: 241 VVADTHFHGIRIHEEIRAVMHTLRANGIDVYVSTASLDDVVRVFAGNPNYGYGVAPENVI 300 Query: 61 GLRLERDGSIYKNAYLKNWPLTWGPGKTVAIKSELVAAKGYGPIFVAGDSDGDYDMLRDF 120 GLRL+ Y + Y W WGPGKTV I++ L + KGYGP+ V GDSDGD MLRDF Sbjct: 301 GLRLDMQDGRYTSTYPAGWHFNWGPGKTVGIRNVLASKKGYGPLLVFGDSDGDAWMLRDF 360 Query: 121 ADTRYGLIVNRMKNGKIGELSKLAATQITAGQPRFLLQGRQESTGNWLPVETSIKYGKT 179 DT G+IVNRMK G+IG SKLAA QI RFLLQGR E TG +P E SIKYGKT Sbjct: 361 KDTAAGVIVNRMKKGEIGADSKLAAEQIGHPDARFLLQGRDEHTGLMIPDEKSIKYGKT 419